Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold91G28102 Striga asiatica HOM05D004409 ORTHO05D005292 2.6e-58 228.4 108 100.0
Migut.J00932 Erythranthe guttata HOM05D004409 ORTHO05D005292 1.2e-26 123.2 99 56.6
Cc08_g11210 Coffea canephora HOM05D004409 ORTHO05D005292 5.0e-25 117.9 101 55.4
Potri.003G084000 Populus trichocarpa HOM05D004409 ORTHO05D005292 1.4e-24 116.3 105 54.3
Actinidia10866 Actinidia chinensis HOM05D004409 ORTHO05D005292 3.2e-24 115.2 84 61.9
ECA240G0589 Erigeron canadensis HOM05D004409 ORTHO05D005292 5.5e-24 114.4 103 52.4
TWI60G0543 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 5.5e-24 114.4 108 51.9
Actinidia31492 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.2e-23 113.2 110 50.0
Lsat_1_v5_gn_6_94501 Lactuca sativa HOM05D004409 ORTHO05D005292 1.2e-23 113.2 105 51.4
Gohir.A12G212400 Gossypium hirsutum HOM05D004409 ORTHO05D005292 1.6e-23 112.8 83 62.7
Sabra03G0054600 Salix brachista HOM05D004409 ORTHO05D005292 1.6e-23 112.8 105 51.4
Gorai.008G230500 Gossypium raimondii HOM05D004409 ORTHO05D005292 2.1e-23 112.5 83 62.7
Manes.01G089900 Manihot esculenta HOM05D004409 ORTHO05D005292 2.1e-23 112.5 83 62.7
QL12p008592 Quercus lobata HOM05D004409 ORTHO05D005292 2.1e-23 112.5 114 50.0
CSS0044628 Camellia sinensis var. sinensis HOM05D004409 ORTHO05D005292 2.7e-23 112.1 83 60.2
Thecc.03G144700 Theobroma cacao HOM05D004409 ORTHO05D005292 2.7e-23 112.1 86 58.1
Dinv28881 Davidia involucrata HOM05D004409 ORTHO05D005292 3.6e-23 111.7 110 50.9
Gohir.D12G214900 Gossypium hirsutum HOM05D004409 ORTHO05D005292 3.6e-23 111.7 83 62.7
GSVIVG01004835001 Vitis vinifera HOM05D004409 ORTHO05D005292 6.1e-23 110.9 108 50.0
Atru.chr9.1197 Acer truncatum HOM05D004409 ORTHO05D005292 7.9e-23 110.5 83 61.4
DCAR_008327 Daucus carota HOM05D004409 ORTHO05D005292 7.9e-23 110.5 83 59.0
Dinv34530 Davidia involucrata HOM05D004409 ORTHO05D005292 7.9e-23 110.5 106 51.9
Thecc.03G239100 Theobroma cacao HOM05D004409 ORTHO05D005292 1.0e-22 110.2 83 59.0
Ciclev10030379m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.4e-22 109.8 83 61.4
Prupe.7G057100 Prunus persica HOM05D004409 ORTHO05D005292 1.4e-22 109.8 106 52.8
RcHm_v2.0_Chr1g0372991 Rosa chinensis HOM05D004409 ORTHO05D005292 1.4e-22 109.8 104 54.8
Ciclev10022946m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.8e-22 109.4 106 53.8
COL.COLO4_37301 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.8e-22 109.4 107 50.5
RcHm_v2.0_Chr1g0328141 Rosa chinensis HOM05D004409 ORTHO05D005292 3.0e-22 108.6 104 53.8
ECA240G1407 Erigeron canadensis HOM05D004409 ORTHO05D005292 3.9e-22 108.2 94 51.1
Nitab4.5_0000185g0190 Nicotiana tabacum HOM05D004409 ORTHO05D005292 3.9e-22 108.2 112 49.1
Peaxi162Scf00102g00085 Petunia axillaris HOM05D004409 ORTHO05D005292 3.9e-22 108.2 107 48.6
Aqoxy3G02644 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 5.1e-22 107.8 106 50.0
HanXRQChr13g0419061 Helianthus annuus HOM05D004409 ORTHO05D005292 5.1e-22 107.8 103 49.5
COL.COLO4_37302 Corchorus olitorius HOM05D004409 ORTHO05D005292 6.7e-22 107.5 114 49.1
Duzib205G0528 Durio zibethinus HOM05D004409 ORTHO05D005292 6.7e-22 107.5 107 50.5
FvH4_7g26430 Fragaria vesca HOM05D004409 ORTHO05D005292 6.7e-22 107.5 111 50.5
THA.LOC104809923 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 6.7e-22 107.5 107 49.5
Thecc.03G144800 Theobroma cacao HOM05D004409 ORTHO05D005292 6.7e-22 107.5 114 51.8
CANSAT21G0737 Cannabis sativa HOM05D004409 ORTHO05D005292 8.8e-22 107.1 105 50.5
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.1e-21 106.7 100 56.0
RcHm_v2.0_Chr1g0372951 Rosa chinensis HOM05D004409 ORTHO05D005292 1.1e-21 106.7 86 55.8
CANSAT21G0033 Cannabis sativa HOM05D004409 ORTHO05D005292 1.5e-21 106.3 102 49.0
Atru.chr6.1971 Acer truncatum HOM05D004409 ORTHO05D005292 2.0e-21 105.9 100 49.0
GSVIVG01004822001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.0e-21 105.9 101 50.5
GSVIVG01004827001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.0e-21 105.9 101 50.5
HanXRQChr03g0089681 Helianthus annuus HOM05D004409 ORTHO05D005292 2.6e-21 105.5 103 49.5
RcHm_v2.0_Chr1g0328171 Rosa chinensis HOM05D004409 ORTHO05D005292 2.6e-21 105.5 86 54.7
Thecc.03G144900 Theobroma cacao HOM05D004409 ORTHO05D005292 2.6e-21 105.5 114 51.8
FAN10G4140 Fragaria x ananassa HOM05D004409 ORTHO05D005292 3.3e-21 105.1 111 50.5
PGSC0003DMG400026212 Solanum tuberosum HOM05D004409 ORTHO05D005292 3.3e-21 105.1 102 50.0
PGR142G3629 Punica granatum HOM05D004409 ORTHO05D005292 4.4e-21 104.8 110 49.1
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 5.7e-21 104.4 104 46.2
TWI39G0310 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 5.7e-21 104.4 103 49.5
TWI39G0462 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 5.7e-21 104.4 103 48.5
EL10Ac1g00121 Beta vulgaris HOM05D004409 ORTHO05D005292 7.4e-21 104.0 86 55.8
FAN01G0604 Fragaria x ananassa HOM05D004409 ORTHO05D005292 7.4e-21 104.0 103 50.5
Actinidia01026 Actinidia chinensis HOM05D004409 ORTHO05D005292 9.7e-21 103.6 106 46.2
CANSAT56G2887 Cannabis sativa HOM05D004409 ORTHO05D005292 9.7e-21 103.6 102 48.0
DCAR_005587 Daucus carota HOM05D004409 ORTHO05D005292 9.7e-21 103.6 79 55.7
FvH4_7g26400 Fragaria vesca HOM05D004409 ORTHO05D005292 9.7e-21 103.6 105 51.4
Prupe.5G054600 Prunus persica HOM05D004409 ORTHO05D005292 9.7e-21 103.6 104 49.0
Ciclev10033339m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.3e-20 103.2 83 57.8
FAN10G3781 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.3e-20 103.2 105 50.5
Atru.chr9.1196 Acer truncatum HOM05D004409 ORTHO05D005292 1.7e-20 102.8 93 51.6
Eucgr.K00114 Eucalyptus grandis HOM05D004409 ORTHO05D005292 1.7e-20 102.8 87 54.0
COL.COLO4_06685 Corchorus olitorius HOM05D004409 ORTHO05D005292 2.2e-20 102.4 78 61.5
MELO3C014170.2 Cucumis melo HOM05D004409 ORTHO05D005292 2.2e-20 102.4 103 46.6
Duzib068G1042 Durio zibethinus HOM05D004409 ORTHO05D005292 2.8e-20 102.1 107 49.5
Duzib205G0410 Durio zibethinus HOM05D004409 ORTHO05D005292 3.7e-20 101.7 107 47.7
TWI39G0193 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 3.7e-20 101.7 103 47.6
Ciclev10022894m.g Citrus clementina HOM05D004409 ORTHO05D005292 4.8e-20 101.3 83 53.0
CsaV3_3G004710 Cucumis sativus L. HOM05D004409 ORTHO05D005292 4.8e-20 101.3 108 46.3
FAN03G2468 Fragaria x ananassa HOM05D004409 ORTHO05D005292 4.8e-20 101.3 104 48.1
ATR1136G211 Amborella trichopoda HOM05D004409 ORTHO05D005292 8.2e-20 100.5 86 51.2
TWI39G0819 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 8.2e-20 100.5 96 52.1
COL.COLO4_21695 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.1e-19 100.1 83 57.8
HanXRQChr13g0419051 Helianthus annuus HOM05D004409 ORTHO05D005292 1.8e-19 99.4 103 47.6
CAN.G572.17 Capsicum annuum HOM05D004409 ORTHO05D005292 2.4e-19 99.0 81 55.6
HanXRQChr13g0418291 Helianthus annuus HOM05D004409 ORTHO05D005292 2.4e-19 99.0 85 49.4
Oeu019420.1 Olea europaea HOM05D004409 ORTHO05D005292 2.4e-19 99.0 108 45.4
Cfa012334 Carpinus fangiana HOM05D004409 ORTHO05D005292 3.1e-19 98.6 82 56.1
FAN06G5092 Fragaria x ananassa HOM05D004409 ORTHO05D005292 3.1e-19 98.6 106 49.1
GSVIVG01004832001 Vitis vinifera HOM05D004409 ORTHO05D005292 3.1e-19 98.6 83 53.0
GSVIVG01013894001 Vitis vinifera HOM05D004409 ORTHO05D005292 3.1e-19 98.6 86 53.5
Duzib068G0789 Durio zibethinus HOM05D004409 ORTHO05D005292 4.1e-19 98.2 104 49.0
TAR375G0026 Trochodendron aralioides HOM05D004409 ORTHO05D005292 4.1e-19 98.2 104 44.2
GSVIVG01024506001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.1e-19 98.2 86 53.5
CANSAT56G2756 Cannabis sativa HOM05D004409 ORTHO05D005292 5.3e-19 97.8 103 46.6
DCAR_003519 Daucus carota HOM05D004409 ORTHO05D005292 5.3e-19 97.8 83 51.8
Lsat_1_v5_gn_6_94401 Lactuca sativa HOM05D004409 ORTHO05D005292 5.3e-19 97.8 107 43.9
MD07G1239700 Malus domestica HOM05D004409 ORTHO05D005292 6.9e-19 97.4 110 50.9
Sed0027041 Sechium edule HOM05D004409 ORTHO05D005292 6.9e-19 97.4 104 47.1
GSVIVG01004836001 Vitis vinifera HOM05D004409 ORTHO05D005292 6.9e-19 97.4 105 44.8
TAR375G0498 Trochodendron aralioides HOM05D004409 ORTHO05D005292 9.1e-19 97.1 104 45.2
COL.COLO4_32251 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.2e-18 96.7 106 44.3
MD07G1239800 Malus domestica HOM05D004409 ORTHO05D005292 1.5e-18 96.3 110 47.3
TAR375G0484 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.5e-18 96.3 104 44.2
HanXRQChr03g0089691 Helianthus annuus HOM05D004409 ORTHO05D005292 2.0e-18 95.9 82 51.2
MD07G1239500 Malus domestica HOM05D004409 ORTHO05D005292 2.0e-18 95.9 105 45.7
PGR042G3450 Punica granatum HOM05D004409 ORTHO05D005292 2.0e-18 95.9 83 53.0
CANSAT56G0658 Cannabis sativa HOM05D004409 ORTHO05D005292 2.6e-18 95.5 108 43.5
CANSAT56G4079 Cannabis sativa HOM05D004409 ORTHO05D005292 2.6e-18 95.5 108 43.5
ClCG10G002150 Citrullus lanatus HOM05D004409 ORTHO05D005292 3.4e-18 95.1 98 46.9
FAN17G1151 Fragaria x ananassa HOM05D004409 ORTHO05D005292 4.5e-18 94.7 105 46.7
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 4.5e-18 94.7 101 46.5
GSVIVG01004838001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.5e-18 94.7 83 48.2
Gohir.D13G124300 Gossypium hirsutum HOM05D004409 ORTHO05D005292 5.9e-18 94.4 102 47.1
Hund27103 Selenicereus undatus HOM05D004409 ORTHO05D005292 7.7e-18 94.0 81 53.1
GSVIVG01013815001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.7e-18 94.0 86 47.7
GSVIVG01013816001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.7e-18 94.0 86 50.0
CAN.G845.22 Capsicum annuum HOM05D004409 ORTHO05D005292 1.0e-17 93.6 103 41.7
MELO3C013895.2 Cucumis melo HOM05D004409 ORTHO05D005292 1.0e-17 93.6 83 48.2
CsaV3_3G002240 Cucumis sativus L. HOM05D004409 ORTHO05D005292 1.3e-17 93.2 103 41.7
Cfa012333 Carpinus fangiana HOM05D004409 ORTHO05D005292 1.7e-17 92.8 96 49.0
Aqoxy6G00065 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 2.9e-17 92.0 106 43.4
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 2.9e-17 92.0 101 45.5
Dinv25140 Davidia involucrata HOM05D004409 ORTHO05D005292 3.8e-17 91.7 107 43.9
Actinidia25914 Actinidia chinensis HOM05D004409 ORTHO05D005292 5.0e-17 91.3 83 47.0
Peaxi162Scf00391g00715 Petunia axillaris HOM05D004409 ORTHO05D005292 5.0e-17 91.3 102 44.1
Cpa.g.sc13.213 Carica papaya HOM05D004409 ORTHO05D005292 1.4e-16 89.7 103 44.7
TAR636G0884 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.5e-16 89.0 108 45.4
Cc06_g12260 Coffea canephora HOM05D004409 ORTHO05D005292 3.2e-16 88.6 107 40.2
Thecc.08G189000 Theobroma cacao HOM05D004409 ORTHO05D005292 3.2e-16 88.6 100 47.0
ECA240G4009 Erigeron canadensis HOM05D004409 ORTHO05D005292 4.2e-16 88.2 93 41.9
GSVIVG01024502001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.2e-16 88.2 86 47.7
GSVIVG01013825001 Vitis vinifera HOM05D004409 ORTHO05D005292 5.5e-16 87.8 86 48.8
ATR1136G215 Amborella trichopoda HOM05D004409 ORTHO05D005292 9.4e-16 87.0 101 40.6
Thecc.07G180600 Theobroma cacao HOM05D004409 ORTHO05D005292 4.7e-15 84.7 100 41.0
Aa31LG9G14800 Aethionema arabicum HOM05D004409 ORTHO05D005292 6.1e-15 84.3 103 42.7
Migut.H01906 Erythranthe guttata HOM05D004409 ORTHO05D005292 6.1e-15 84.3 106 38.7
THA.LOC104816486 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 2.3e-14 82.4 102 40.2
TAR375G0880 Trochodendron aralioides HOM05D004409 ORTHO05D005292 3.0e-14 82.0 95 40.0
Eucgr.K00115 Eucalyptus grandis HOM05D004409 ORTHO05D005292 5.2e-14 81.3 83 48.2
Haze_08359 Corylus avellana HOM05D004409 ORTHO05D005292 8.8e-14 80.5 69 56.5
Oeu056339.1 Olea europaea HOM05D004409 ORTHO05D005292 1.1e-13 80.1 99 42.4
Ciclev10033338m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.0e-13 79.3 95 43.2
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 2.0e-13 79.3 78 46.2
Migut.H01907 Erythranthe guttata HOM05D004409 ORTHO05D005292 2.6e-13 79.0 111 38.7
ATR1136G026 Amborella trichopoda HOM05D004409 ORTHO05D005292 5.7e-13 77.8 77 44.2
MSTRG.27238 Avicennia marina HOM05D004409 ORTHO05D005292 7.4e-13 77.4 112 39.3
BcaB04g18966 Brassica carinata HOM05D004409 ORTHO05D005292 2.2e-12 75.9 99 40.4
BcaC01g03728 Brassica carinata HOM05D004409 ORTHO05D005292 6.3e-12 74.3 99 41.4
Oeu006074.1 Olea europaea HOM05D004409 ORTHO05D005292 1.1e-11 73.6 79 44.3
Sp6g08250 Schrenkiella parvula HOM05D004409 ORTHO05D005292 1.1e-11 73.6 79 44.3
BcaB01g02799 Brassica carinata HOM05D004409 ORTHO05D005292 9.1e-11 70.5 105 38.1
A03p40420 Brassica napus HOM05D004409 ORTHO05D005292 7.7e-10 67.4 94 39.4
C03p49230 Brassica napus HOM05D004409 ORTHO05D005292 7.7e-10 67.4 96 37.5
BolC3t17205H Brassica oleracea HOM05D004409 ORTHO05D005292 7.7e-10 67.4 94 39.4
BraA03t13197Z Brassica rapa HOM05D004409 ORTHO05D005292 7.7e-10 67.4 94 39.4
Nn7g36459 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.7e-09 66.2 114 36.8
CARHR260260 Cardamine hirsuta HOM05D004409 ORTHO05D005292 2.9e-09 65.5 109 36.7
ATR0745G048 Amborella trichopoda HOM05D004409 ORTHO05D005292 3.8e-09 65.1 107 33.6
Carub.0006s2782 Capsella rubella HOM05D004409 ORTHO05D005292 1.5e-08 63.2 105 34.3
PSO339G0161 Papaver somniferum HOM05D002739 ORTHO05D002877 1.5e-08 63.2 106 34.0
Gorai.013G138900 Gossypium raimondii HOM05D004409 ORTHO05D005292 5.5e-08 61.2 61 47.5
Nn2g15045 Nelumbo nucifera HOM05D002739 ORTHO05D002877 9.4e-08 60.5 85 34.1
Actinidia16366 Actinidia chinensis HOM05D002739 ORTHO05D002877 1.2e-07 60.1 71 39.4
PSO384G1869 Papaver somniferum HOM05D002739 ORTHO05D002877 1.2e-07 60.1 106 33.0
SMO134G0054 Selaginella moellendorffii HOM05D004409 ORTHO05D005292 1.6e-07 59.7 99 29.3
Cfa012335 Carpinus fangiana HOM05D004409 ORTHO05D005292 3.6e-07 58.5 100 31.0
QL01p017875 Quercus lobata HOM05D002739 ORTHO05D002877 4.7e-07 58.2 89 37.1
Dinv34529 Davidia involucrata HOM05D004409 ORTHO05D005292 6.1e-07 57.8 43 62.8
Lj1g0028228 Lotus japonicus HOM05D002739 ORTHO05D002877 1.0e-06 57.0 103 29.1
PSO339G6632 Papaver somniferum HOM05D002739 ORTHO05D002877 1.0e-06 57.0 106 30.2
CARHR241650 Cardamine hirsuta HOM05D002739 ORTHO05D002877 1.4e-06 56.6 111 29.7
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 1.8e-06 56.2 104 32.7
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 1.8e-06 56.2 104 32.7
Nn7g36442 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.8e-06 56.2 104 31.7
Nn7g36457 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.8e-06 56.2 104 31.7
Nn7g38448 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.8e-06 56.2 104 31.7
AT4G33550 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 2.3e-06 55.8 106 29.2
Thhalv10026604m.g Eutrema salsugineum HOM05D002739 ORTHO05D002877 3.0e-06 55.5 58 36.2
PSO349G0096 Papaver somniferum HOM05D002739 ORTHO05D002877 3.0e-06 55.5 107 29.9
ATR0721G129 Amborella trichopoda HOM05D002739 ORTHO05D002877 4.0e-06 55.1 54 42.6
AL7G17970 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 4.0e-06 55.1 106 29.2
BcaB03g12793 Brassica carinata HOM05D002739 ORTHO05D002877 4.0e-06 55.1 58 36.2
BcaC01g00985 Brassica carinata HOM05D002739 ORTHO05D002877 4.0e-06 55.1 58 36.2
Sp7g31290 Schrenkiella parvula HOM05D002739 ORTHO05D002877 4.0e-06 55.1 58 36.2
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 5.2e-06 54.7 103 32.0
Carub.0007s0690 Capsella rubella HOM05D002739 ORTHO05D002877 5.2e-06 54.7 100 28.0


User provided reference genes

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