Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold91G28039 Striga asiatica HOM05D000160 ORTHO05D006841 5.1e-122 441.0 214 100.0
Oeu016261.1 Olea europaea HOM05D000160 ORTHO05D006841 8.6e-21 104.8 244 34.0
Migut.N00066 Erythranthe guttata HOM05D000160 ORTHO05D006841 1.9e-20 103.6 173 41.0
Cc03_g01350 Coffea canephora HOM05D000160 ORTHO05D006841 6.4e-16 88.6 205 33.7
Medtr2g435450 Medicago truncatula HOM05D000160 ORTHO05D006841 8.6e-13 78.2 274 28.8
DCAR_023308 Daucus carota HOM05D000160 ORTHO05D006841 1.5e-12 77.4 208 32.7
Prupe.1G129600 Prunus persica HOM05D000160 ORTHO05D006841 1.9e-12 77.0 273 28.9
RcHm_v2.0_Chr4g0423791 Rosa chinensis HOM05D000160 ORTHO05D006841 1.9e-12 77.0 269 29.0
Psat1g156360 Pisum sativum HOM05D000160 ORTHO05D006841 4.3e-12 75.9 250 29.6
Gohir.D01G023508 Gossypium hirsutum HOM05D000160 ORTHO05D006841 7.3e-12 75.1 252 28.6
QL06p010887 Quercus lobata HOM05D000160 ORTHO05D006841 1.2e-11 74.3 195 31.3
HanXRQChr06g0173371 Helianthus annuus HOM05D000160 ORTHO05D006841 1.6e-11 73.9 252 27.4
TAR636G3575 Trochodendron aralioides HOM05D000160 ORTHO05D006841 1.6e-11 73.9 247 27.5
Manes.15G009100 Manihot esculenta HOM05D000160 ORTHO05D006841 2.8e-11 73.2 213 29.1
MD16G1162100 Malus domestica HOM05D000160 ORTHO05D006841 3.6e-11 72.8 273 27.8
TPR.G21547 Trifolium pratense HOM05D000160 ORTHO05D006841 3.6e-11 72.8 203 33.0
CiPaw.01G144400 Carya illinoinensis HOM05D000160 ORTHO05D006841 4.7e-11 72.4 196 30.1
Ciclev10006857m.g Citrus clementina HOM05D000160 ORTHO05D006841 6.2e-11 72.0 261 25.3
TWI73G0596 Tripterygium wilfordii HOM05D000160 ORTHO05D006841 6.2e-11 72.0 205 31.2
vmacro15207 Vaccinium macrocarpon HOM05D000160 ORTHO05D006841 8.1e-11 71.6 201 31.3
arahy.Tifrunner.gnm1.ann1.1BS0HC Arachis hypogaea HOM05D000160 ORTHO05D006841 1.1e-10 71.2 263 26.2
arahy.Tifrunner.gnm1.ann1.WBZ0ZZ Arachis hypogaea HOM05D000160 ORTHO05D006841 1.1e-10 71.2 263 26.2
Gohir.A01G033400 Gossypium hirsutum HOM05D000160 ORTHO05D006841 1.1e-10 71.2 249 29.3
Gorai.002G029100 Gossypium raimondii HOM05D000160 ORTHO05D006841 1.1e-10 71.2 252 27.8
Glyma.09G041100 Glycine max HOM05D000160 ORTHO05D006841 2.4e-10 70.1 269 26.0
arahy.Tifrunner.gnm1.ann1.Z6V8E5 Arachis hypogaea HOM05D000160 ORTHO05D006841 3.1e-10 69.7 274 27.0
VMungo1215G3246 Vigna mungo HOM05D000160 ORTHO05D006841 6.9e-10 68.6 266 25.9
FAN07G2632 Fragaria x ananassa HOM05D000160 ORTHO05D006841 8.9e-10 68.2 260 28.5
CSS0009492 Camellia sinensis var. sinensis HOM05D000160 ORTHO05D006841 1.2e-09 67.8 194 33.0
Glyma.15G146900 Glycine max HOM05D000160 ORTHO05D006841 1.5e-09 67.4 272 26.8
Gohir.D09G062300 Gossypium hirsutum HOM05D000160 ORTHO05D006841 2.0e-09 67.0 251 27.9
MD13G1162300 Malus domestica HOM05D000160 ORTHO05D006841 2.6e-09 66.6 213 29.6
Phvul.009G252000 Phaseolus vulgaris HOM05D000160 ORTHO05D006841 2.6e-09 66.6 203 29.6
FAN17G2577 Fragaria x ananassa HOM05D000160 ORTHO05D006841 3.4e-09 66.2 260 27.7
Glyma.07G244400 Glycine max HOM05D000160 ORTHO05D006841 3.4e-09 66.2 208 27.4
ECA246G3603 Erigeron canadensis HOM05D000160 ORTHO05D006841 4.4e-09 65.9 256 26.2
Lj6g0024841 Lotus japonicus HOM05D000160 ORTHO05D006841 4.4e-09 65.9 201 30.3
PGR031G0050 Punica granatum HOM05D000160 ORTHO05D006841 4.4e-09 65.9 255 27.1
Gorai.006G077100 Gossypium raimondii HOM05D000160 ORTHO05D006841 5.8e-09 65.5 251 27.5
Cfa015448 Carpinus fangiana HOM05D000160 ORTHO05D006841 7.6e-09 65.1 202 29.2
FAN12G0177 Fragaria x ananassa HOM05D000160 ORTHO05D006841 7.6e-09 65.1 259 27.8
Potri.008G211300 Populus trichocarpa HOM05D000160 ORTHO05D006841 7.6e-09 65.1 200 27.5
Potri.010G005700 Populus trichocarpa HOM05D000160 ORTHO05D006841 7.6e-09 65.1 217 28.6
FvH4_4g18890 Fragaria vesca HOM05D000160 ORTHO05D006841 9.9e-09 64.7 259 27.8
FAN12G2003 Fragaria x ananassa HOM05D000160 ORTHO05D006841 9.9e-09 64.7 259 27.8
Lalb_Chr12g0201131 Lupinus albus HOM05D000160 ORTHO05D006841 9.9e-09 64.7 203 29.1
MBI18_g04560_MAGBIO Magnolia biondii HOM05D000160 ORTHO05D006841 9.9e-09 64.7 247 29.6
arahy.Tifrunner.gnm1.ann1.B5RAHR Arachis hypogaea HOM05D000160 ORTHO05D006841 1.7e-08 63.9 232 27.6
Duzib151G0703 Durio zibethinus HOM05D000160 ORTHO05D006841 1.7e-08 63.9 194 30.4
AL504U10010 Arabidopsis lyrata HOM05D000160 ORTHO05D006841 2.9e-08 63.2 196 27.6
Duzib212G0352 Durio zibethinus HOM05D000160 ORTHO05D006841 4.9e-08 62.4 147 33.3
AL3G17900 Arabidopsis lyrata HOM05D000160 ORTHO05D006841 8.4e-08 61.6 196 28.1
A03p34870 Brassica napus HOM05D000160 ORTHO05D006841 1.1e-07 61.2 196 28.1
C03p42440 Brassica napus HOM05D000160 ORTHO05D006841 1.1e-07 61.2 196 28.1
BolC3t16515H Brassica oleracea HOM05D000160 ORTHO05D006841 1.1e-07 61.2 196 28.1
Atru.chr4.2922 Acer truncatum HOM05D000160 ORTHO05D006841 1.4e-07 60.8 268 25.7
Aa31LG5G17370 Aethionema arabicum HOM05D000160 ORTHO05D006841 1.9e-07 60.5 195 27.7
Nitab4.5_0007304g0020 Nicotiana tabacum HOM05D000160 ORTHO05D006841 1.9e-07 60.5 197 25.4
Phvul.003G108500 Phaseolus vulgaris HOM05D000160 ORTHO05D006841 1.9e-07 60.5 208 26.4
PGSC0003DMG400001189 Solanum tuberosum HOM05D000160 ORTHO05D006841 2.4e-07 60.1 248 25.8
BraA01t04416Z Brassica rapa HOM05D000160 ORTHO05D006841 3.2e-07 59.7 196 27.0
BNapus_Darmor_BZH_scaffold_117p00070 Brassica napus HOM05D000160 ORTHO05D006841 4.2e-07 59.3 196 26.5
Sp3g05750 Schrenkiella parvula HOM05D000160 ORTHO05D006841 4.2e-07 59.3 196 27.6
Sopen01g026970 Solanum pennellii HOM05D000160 ORTHO05D006841 4.2e-07 59.3 250 25.2
Gohir.A09G063400 Gossypium hirsutum HOM05D000160 ORTHO05D006841 5.4e-07 58.9 190 29.5
Thecc.04G290900 Theobroma cacao HOM05D000160 ORTHO05D006841 5.4e-07 58.9 199 27.6
Aqoxy2G02866 Aquilegia oxysepala HOM05D000160 ORTHO05D006841 7.1e-07 58.5 197 29.4
BraA03t12667Z Brassica rapa HOM05D000160 ORTHO05D006841 7.1e-07 58.5 196 27.6
Lj4g0020640 Lotus japonicus HOM05D000160 ORTHO05D006841 7.1e-07 58.5 208 26.4
Sabra10G0004900 Salix brachista HOM05D000160 ORTHO05D006841 7.1e-07 58.5 219 25.6
Solyc01g065570.2 Solanum lycopersicum HOM05D000160 ORTHO05D006841 7.1e-07 58.5 250 25.2
Hma1.2p1_1352F.1_g277570 Hydrangea macrophylla HOM05D000160 ORTHO05D006841 1.2e-06 57.8 193 28.5
Actinidia13381 Actinidia chinensis HOM05D000160 ORTHO05D006841 1.6e-06 57.4 193 28.5
BcaC05g30556 Brassica carinata HOM05D000160 ORTHO05D006841 1.6e-06 57.4 196 26.0
Nn4g25714 Nelumbo nucifera HOM05D000160 ORTHO05D006841 1.6e-06 57.4 224 27.2
HPP92_017231 Vanilla planifolia HOM05D000160 ORTHO05D006841 1.6e-06 57.4 262 25.2
BcaC09g47919 Brassica carinata HOM05D000160 ORTHO05D006841 2.7e-06 56.6 196 26.0
BolC1t05587H Brassica oleracea HOM05D000160 ORTHO05D006841 2.7e-06 56.6 196 26.0
Thhalv10022261m.g Eutrema salsugineum HOM05D000160 ORTHO05D006841 2.7e-06 56.6 198 26.8
AT3G06778 Arabidopsis thaliana HOM05D000160 ORTHO05D006841 3.5e-06 56.2 197 26.9
COL.COLO4_34698 Corchorus olitorius HOM05D000160 ORTHO05D006841 3.5e-06 56.2 196 28.1
Psat4g024720 Pisum sativum HOM05D000160 ORTHO05D006841 7.8e-06 55.1 213 25.4


User provided reference genes

Program Settings