Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold91G27999 Striga asiatica HOM05D003821 ORTHO05D004449 5.8e-56 220.7 116 100.0
Nitab4.5_0000191g0110 Nicotiana tabacum HOM05D003821 ORTHO05D004449 5.9e-24 114.4 114 58.8
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 9.4e-22 107.1 113 59.3
CAN.G185.14 Capsicum annuum HOM05D003821 ORTHO05D004449 2.1e-21 105.9 113 54.9
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 2.1e-21 105.9 113 58.4
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 8.0e-21 104.0 113 59.3
SGA_v2.0_scaffold428G51522 Striga asiatica HOM05D003821 ORTHO05D004449 1.0e-20 103.6 113 56.6
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 1.4e-20 103.2 114 54.4
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 5.2e-20 101.3 113 53.1
Nitab4.5_0003546g0070 Nicotiana tabacum HOM05D003821 ORTHO05D004449 6.8e-20 100.9 115 59.1
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 6.8e-20 100.9 112 55.4
SGA_v2.0_scaffold147G36288 Striga asiatica HOM05D003821 ORTHO05D004449 1.2e-19 100.1 113 54.9
Sed0001615 Sechium edule HOM05D003821 ORTHO05D004449 3.4e-19 98.6 113 55.8
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 7.5e-19 97.4 113 55.8
PGSC0003DMG400022856 Solanum tuberosum HOM05D003821 ORTHO05D004449 9.7e-19 97.1 116 52.6
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 2.8e-18 95.5 114 53.5
vmacro08148 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 2.8e-18 95.5 151 44.4
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 6.3e-18 94.4 112 51.8
Haze_01204 Corylus avellana HOM05D003821 ORTHO05D004449 8.3e-18 94.0 112 52.7
Nitab4.5_0004438g0100 Nicotiana tabacum HOM05D003821 ORTHO05D004449 8.3e-18 94.0 114 49.1
QL10p053326 Quercus lobata HOM05D003821 ORTHO05D004449 1.4e-17 93.2 113 55.8
QL10p054532 Quercus lobata HOM05D003821 ORTHO05D004449 1.4e-17 93.2 113 55.8
SalBow2G1159 Salvia bowleyana HOM05D003821 ORTHO05D004449 1.4e-17 93.2 113 53.1
Atru.chr4.2835 Acer truncatum HOM05D003821 ORTHO05D004449 3.1e-17 92.0 133 46.6
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 5.3e-17 91.3 111 50.5
Nitab4.5_0000570g0120 Nicotiana tabacum HOM05D003821 ORTHO05D004449 1.2e-16 90.1 115 46.1
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.6e-16 89.7 113 50.4
Cpa.g.sc9.208 Carica papaya HOM05D003821 ORTHO05D004449 5.9e-16 87.8 105 54.3
vmacro15236 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 5.9e-16 87.8 114 49.1
Actinidia32231 Actinidia chinensis HOM05D003821 ORTHO05D004449 7.7e-16 87.4 112 50.0
Gorai.004G142200 Gossypium raimondii HOM05D003821 ORTHO05D004449 1.0e-15 87.0 125 45.6
Rhsim04G0221500 Rhododendron simsii HOM05D003821 ORTHO05D004449 1.0e-15 87.0 141 41.8
Medtr1g088760 Medicago truncatula HOM05D003821 ORTHO05D004449 1.3e-15 86.7 116 49.1
Ciclev10007067m.g Citrus clementina HOM05D003821 ORTHO05D004449 1.7e-15 86.3 126 45.2
CAN.G484.32 Capsicum annuum HOM05D003821 ORTHO05D004449 2.2e-15 85.9 131 48.9
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 2.2e-15 85.9 115 49.6
VMungo1309G1076 Vigna mungo HOM05D003821 ORTHO05D004449 2.2e-15 85.9 102 52.0
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 2.9e-15 85.5 115 52.2
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 3.8e-15 85.1 113 49.6
AUR62008616 Chenopodium quinoa HOM05D003821 ORTHO05D004449 1.1e-14 83.6 112 45.5
TPR.G9594 Trifolium pratense HOM05D003821 ORTHO05D004449 1.1e-14 83.6 113 47.8
FAN12G1096 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.5e-14 83.2 112 47.3
Peaxi162Scf00048g00209 Petunia axillaris HOM05D003821 ORTHO05D004449 1.5e-14 83.2 107 48.6
FAN07G0841 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.9e-14 82.8 112 48.2
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 2.5e-14 82.4 113 46.0
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 4.2e-14 81.6 112 47.3
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 4.2e-14 81.6 112 47.3
FAN15G2810 Fragaria x ananassa HOM05D003821 ORTHO05D004449 4.2e-14 81.6 105 47.6
FAN24G2279 Fragaria x ananassa HOM05D003821 ORTHO05D004449 4.2e-14 81.6 105 47.6
FAN27G2508 Fragaria x ananassa HOM05D003821 ORTHO05D004449 4.2e-14 81.6 105 46.7
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 5.5e-14 81.3 98 52.0
TPR.G33980 Trifolium pratense HOM05D003821 ORTHO05D004449 7.2e-14 80.9 105 50.5
AUR62033168 Chenopodium quinoa HOM05D003821 ORTHO05D004449 9.4e-14 80.5 112 44.6
DCAR_013986 Daucus carota HOM05D003821 ORTHO05D004449 9.4e-14 80.5 122 47.5
CSS0027872 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 1.6e-13 79.7 98 53.1
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 1.6e-13 79.7 108 48.1
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 1.6e-13 79.7 111 46.8
DCAR_002813 Daucus carota HOM05D003821 ORTHO05D004449 1.6e-13 79.7 106 46.2
A03p49340 Brassica napus HOM05D003821 ORTHO05D004449 2.1e-13 79.3 111 47.7
FAN20G2567 Fragaria x ananassa HOM05D000897 ORTHO05D000716 2.1e-13 79.3 105 46.7
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 6.1e-13 77.8 113 50.4
RcHm_v2.0_Chr6g0293541 Rosa chinensis HOM05D003821 ORTHO05D004449 6.1e-13 77.8 112 45.5
C07p47410 Brassica napus HOM05D003821 ORTHO05D004449 1.0e-12 77.0 115 47.8
arahy.Tifrunner.gnm1.ann1.UD53LE Arachis hypogaea HOM05D003821 ORTHO05D004449 3.0e-12 75.5 106 47.2
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 3.0e-12 75.5 112 44.6
arahy.Tifrunner.gnm1.ann1.LH51N9 Arachis hypogaea HOM05D003821 ORTHO05D004449 4.0e-12 75.1 107 47.7
EL10Ac7g17441 Beta vulgaris HOM05D003821 ORTHO05D004449 4.0e-12 75.1 126 42.9
COL.COLO4_13871 Corchorus olitorius HOM05D003821 ORTHO05D004449 4.0e-12 75.1 113 46.0
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 4.0e-12 75.1 111 45.9
BraA03t14035Z Brassica rapa HOM05D003821 ORTHO05D004449 6.8e-12 74.3 111 45.9
BcaC06g33446 Brassica carinata HOM05D003821 ORTHO05D004449 1.2e-11 73.6 108 47.2
Sc24g0003850 Simmondsia chinensis HOM05D000714 ORTHO05D000544 1.2e-11 73.6 111 44.1
BolC7t45268H Brassica oleracea HOM05D003821 ORTHO05D004449 1.5e-11 73.2 108 47.2
FAN17G0959 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.5e-11 73.2 109 45.0
Sabra08G0153500 Salix brachista HOM05D003821 ORTHO05D004449 3.4e-11 72.0 134 41.0
ATR0580G132 Amborella trichopoda HOM05D003821 ORTHO05D004449 4.4e-11 71.6 113 43.4
BcaB04g18333 Brassica carinata HOM05D003821 ORTHO05D004449 4.4e-11 71.6 112 44.6
A01p21700 Brassica napus HOM05D000802 ORTHO05D013138 4.4e-11 71.6 113 46.0
ClCG09G006050 Citrullus lanatus HOM05D003821 ORTHO05D004449 7.5e-11 70.9 111 43.2
Hma1.2p1_0209F.1_g088610 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 4.8e-10 68.2 53 66.0
RcHm_v2.0_Chr4g0422221 Rosa chinensis HOM05D003821 ORTHO05D004449 4.8e-10 68.2 43 81.4
Sabra10G0014100 Salix brachista HOM05D003821 ORTHO05D004449 4.8e-10 68.2 173 33.5
BcaC07g37933 Brassica carinata HOM05D003821 ORTHO05D004449 6.3e-10 67.8 113 46.0
Ah.04g153550 Amaranthus hybridus HOM05D003821 ORTHO05D004449 1.1e-09 67.0 115 41.7
CANSAT78G0465 Cannabis sativa HOM05D003821 ORTHO05D004449 1.1e-09 67.0 108 39.8
TAR362G0968 Trochodendron aralioides HOM05D003821 ORTHO05D004449 1.1e-09 67.0 113 38.9
BcaC06g32965 Brassica carinata HOM05D003821 ORTHO05D004449 1.8e-09 66.2 108 42.6
Hund20554 Selenicereus undatus HOM05D003821 ORTHO05D004449 2.4e-09 65.9 116 40.5
Aa31LG10G6300 Aethionema arabicum HOM05D003821 ORTHO05D004449 4.1e-09 65.1 134 39.6
Gorai.007G237400 Gossypium raimondii HOM05D003821 ORTHO05D004449 4.1e-09 65.1 95 47.4
Nn4g25849 Nelumbo nucifera HOM05D003821 ORTHO05D004449 5.4e-09 64.7 111 42.3
A08p11990 Brassica napus HOM05D003821 ORTHO05D004449 7.0e-09 64.3 114 42.1
TWI79G0264 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 7.0e-09 64.3 99 42.4
BcaNung00244 Brassica carinata HOM05D000802 ORTHO05D013138 9.1e-09 63.9 112 42.0
Os06g0274000 Oryza sativa ssp. japonica HOM05D003821 ORTHO05D004449 2.0e-08 62.8 102 44.1
Glyma.03G213100 Glycine max HOM05D003821 ORTHO05D004449 3.5e-08 62.0 52 61.5
Medtr7g108610 Medicago truncatula HOM05D003821 ORTHO05D004449 3.5e-08 62.0 51 62.7
FvH4_4g18020 Fragaria vesca HOM05D003821 ORTHO05D004449 4.5e-08 61.6 113 39.8
Ah.08g213210 Amaranthus hybridus HOM05D003821 ORTHO05D004449 7.7e-08 60.8 149 36.2
unitig_32.g10644 Utricularia gibba HOM05D003821 ORTHO05D004449 1.0e-07 60.5 36 80.6
MELO3C032813.2 Cucumis melo HOM05D003821 ORTHO05D004449 2.3e-07 59.3 53 62.3
Migut.N00088 Erythranthe guttata HOM05D003821 ORTHO05D004449 6.6e-07 57.8 113 38.1
Gohir.D08G138600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 6.6e-07 57.8 111 38.7
Manes.05G064201 Manihot esculenta HOM05D003821 ORTHO05D004449 1.5e-06 56.6 40 70.0
Prupe.1G136900 Prunus persica HOM05D003821 ORTHO05D004449 1.9e-06 56.2 112 38.4
COL.COLO4_23375 Corchorus olitorius HOM05D003821 ORTHO05D004449 3.3e-06 55.5 44 70.5
Gohir.D11G223400 Gossypium hirsutum HOM05D003821 ORTHO05D004449 3.3e-06 55.5 45 60.0
Zm00001eb380410 Zea mays HOM05D003821 ORTHO05D004449 3.3e-06 55.5 99 40.4
Gohir.A10G164000 Gossypium hirsutum HOM05D003821 ORTHO05D004449 5.5e-06 54.7 45 60.0
SalBow5G0239 Salvia bowleyana HOM05D007625 ORTHO05D009738 5.5e-06 54.7 34 79.4


User provided reference genes

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