Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 6.0e-95 350.9 187 100.0
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 2.0e-58 229.6 181 66.9
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 5.0e-57 224.9 188 67.6
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 8.5e-49 197.6 184 59.2
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 1.1e-48 197.2 183 60.1
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 2.5e-48 196.1 172 64.0
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 1.2e-47 193.7 185 58.4
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 1.2e-47 193.7 171 59.1
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 1.2e-47 193.7 150 66.0
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 1.0e-46 190.7 174 56.9
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 3.0e-46 189.1 181 57.5
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 5.2e-46 188.3 193 59.1
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 1.2e-45 187.2 142 67.6
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.2e-45 187.2 142 67.6
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 2.0e-45 186.4 186 53.2
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 2.6e-45 186.0 142 66.2
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 2.6e-45 186.0 152 63.8
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 4.4e-45 185.3 142 67.6
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 7.5e-45 184.5 142 65.5
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 9.8e-45 184.1 168 57.1
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 9.8e-45 184.1 147 61.9
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 9.8e-45 184.1 181 56.4
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 1.3e-44 183.7 168 57.1
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 1.3e-44 183.7 172 58.1
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 1.3e-44 183.7 139 67.6
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.7e-44 183.3 176 56.8
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.2e-44 183.0 176 56.8
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 2.2e-44 183.0 192 54.2
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 2.8e-44 182.6 172 58.7
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 3.7e-44 182.2 177 54.8
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 4.9e-44 181.8 142 64.1
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 8.3e-44 181.0 142 64.8
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 8.3e-44 181.0 144 65.3
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 1.8e-43 179.9 142 66.2
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 2.4e-43 179.5 182 56.6
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 4.1e-43 178.7 150 63.3
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 4.1e-43 178.7 150 63.3
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 7.0e-43 177.9 162 61.1
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 7.0e-43 177.9 152 61.8
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 9.1e-43 177.6 206 52.9
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 2.0e-42 176.4 174 55.2
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 2.0e-42 176.4 176 54.5
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 2.7e-42 176.0 154 62.3
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 2.7e-42 176.0 188 54.8
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 3.5e-42 175.6 183 56.3
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 3.5e-42 175.6 183 56.3
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 2.3e-41 172.9 187 55.1
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 2.3e-41 172.9 182 53.8
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 3.8e-41 172.2 154 61.0
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 5.0e-41 171.8 145 60.0
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 5.0e-41 171.8 183 54.6
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 6.6e-41 171.4 139 65.5
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 8.6e-41 171.0 179 55.3
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 8.6e-41 171.0 141 60.3
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 1.1e-40 170.6 148 63.5
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 1.5e-40 170.2 148 58.8
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 1.9e-40 169.9 148 60.8
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 4.3e-40 168.7 149 59.7
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 7.2e-40 167.9 173 53.8
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 1.4e-38 163.7 163 55.2
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 3.0e-38 162.5 174 52.3
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 4.0e-38 162.2 161 56.5
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 5.2e-38 161.8 177 50.8
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 6.8e-38 161.4 140 60.7
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 1.2e-37 160.6 140 59.3
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 2.6e-37 159.5 174 52.9
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 2.6e-37 159.5 174 52.9
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 5.7e-37 158.3 137 60.6
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 7.5e-37 157.9 139 59.7
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 9.8e-37 157.5 130 60.8
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 9.8e-37 157.5 175 51.4
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 2.2e-36 156.4 140 57.9
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 2.9e-36 156.0 135 64.4
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 4.9e-36 155.2 145 59.3
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 1.4e-35 153.7 183 49.7
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 1.8e-35 153.3 123 65.9
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 1.8e-35 153.3 170 51.8
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 4.1e-35 152.1 134 58.2
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 7.0e-35 151.4 137 56.9
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 1.6e-34 150.2 178 46.6
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 5.6e-32 141.7 121 63.6
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 1.6e-31 140.2 140 53.6
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 1.5e-29 133.7 121 56.2
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 5.8e-29 131.7 112 59.8
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 3.7e-28 129.0 110 59.1
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 1.1e-27 127.5 145 49.7
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 1.9e-27 126.7 110 58.2
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 3.0e-25 119.4 119 55.5
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.6e-23 113.6 120 52.5
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 1.4e-22 110.5 140 40.0
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 2.3e-22 109.8 179 40.8
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 4.4e-21 105.5 105 51.4
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 9.8e-21 104.4 81 61.7
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 1.1e-19 100.9 84 66.7
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.4e-19 100.5 69 73.9
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.9e-19 100.1 134 44.8
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 6.2e-15 85.1 91 48.4
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 7.6e-13 78.2 140 35.7
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 1.2e-10 70.9 124 35.5
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 2.7e-10 69.7 109 39.4
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 5.1e-09 65.5 117 39.3


User provided reference genes

Program Settings