Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 5.9e-166 587.4 290 100.0
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 4.4e-20 102.8 76 67.1
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 6.4e-19 99.0 76 63.2
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 1.4e-18 97.8 75 62.7
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 1.4e-18 97.8 75 62.7
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 2.4e-18 97.1 76 60.5
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 3.2e-18 96.7 75 60.0
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 4.2e-18 96.3 75 60.0
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 5.4e-18 95.9 76 61.8
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 5.4e-18 95.9 75 62.7
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 7.1e-18 95.5 75 61.3
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 9.3e-18 95.1 75 60.0
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 1.6e-17 94.4 75 60.0
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 2.1e-17 94.0 75 58.7
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 2.1e-17 94.0 75 58.7
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 3.5e-17 93.2 75 60.0
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 3.5e-17 93.2 75 61.3
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 3.5e-17 93.2 75 60.0
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 4.6e-17 92.8 75 58.7
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 7.8e-17 92.0 75 57.3
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 1.0e-16 91.7 75 57.3
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 1.3e-16 91.3 74 59.5
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 1.7e-16 90.9 75 56.0
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 2.3e-16 90.5 75 56.0
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 2.3e-16 90.5 74 58.1
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 3.0e-16 90.1 74 59.5
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 3.0e-16 90.1 75 57.3
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 3.9e-16 89.7 75 58.7
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 3.9e-16 89.7 75 57.3
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 3.9e-16 89.7 75 54.7
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.9e-16 89.7 75 60.0
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 8.7e-16 88.6 75 57.3
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 8.7e-16 88.6 76 59.2
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 1.1e-15 88.2 80 56.2
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.5e-15 87.8 74 56.8
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 1.5e-15 87.8 74 58.1
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.9e-15 87.4 75 56.0
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 2.5e-15 87.0 75 57.3
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.5e-15 87.0 75 56.0
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 2.5e-15 87.0 75 56.0
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.5e-15 87.0 75 53.3
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 2.5e-15 87.0 74 58.1
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 5.6e-15 85.9 75 57.3
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 5.6e-15 85.9 75 54.7
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 7.3e-15 85.5 74 55.4
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 7.3e-15 85.5 75 54.7
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 7.3e-15 85.5 75 54.7
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 7.3e-15 85.5 74 56.8
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 7.3e-15 85.5 75 53.3
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 7.3e-15 85.5 75 53.3
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 9.6e-15 85.1 75 57.3
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 9.6e-15 85.1 75 54.7
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 1.3e-14 84.7 75 52.0
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 1.3e-14 84.7 75 53.3
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 1.6e-14 84.3 75 53.3
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.1e-14 84.0 74 52.7
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 2.1e-14 84.0 75 52.0
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 2.8e-14 83.6 75 52.0
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 2.8e-14 83.6 75 53.3
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 2.8e-14 83.6 75 53.3
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.6e-14 83.2 75 52.0
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.6e-14 83.2 75 52.0
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 3.6e-14 83.2 75 53.3
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.6e-14 83.2 75 53.3
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.6e-14 83.2 75 53.3
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 3.6e-14 83.2 75 52.0
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 6.2e-14 82.4 92 45.7
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.1e-13 81.6 81 46.9
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 1.8e-13 80.9 75 53.3
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 2.4e-13 80.5 80 48.8
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 3.1e-13 80.1 96 43.8
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 6.9e-13 79.0 81 45.7
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 1.5e-12 77.8 81 46.9
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 1.5e-12 77.8 81 46.9
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 1.3e-11 74.7 99 42.4
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 2.1e-09 67.4 31 87.1
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 3.5e-09 66.6 75 45.3
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 6.7e-08 62.4 28 78.6
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 6.7e-08 62.4 70 45.7
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 8.7e-08 62.0 74 43.2
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 8.7e-08 62.0 79 46.8
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.5e-07 60.5 46 60.9
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 3.3e-07 60.1 28 82.1
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 7.4e-07 58.9 28 78.6
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 2.8e-06 57.0 28 78.6


User provided reference genes

Program Settings