Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 4.5e-82 307.8 142 100.0
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 2.9e-73 278.5 161 83.2
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 1.2e-66 256.5 161 73.9
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 4.6e-63 244.6 161 69.6
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 2.3e-62 242.3 161 70.8
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 1.1e-59 233.4 134 76.1
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 3.1e-59 231.9 134 74.6
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 1.2e-58 229.9 161 64.0
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 1.5e-58 229.6 160 65.0
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 2.2e-57 225.7 159 65.4
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 1.2e-55 219.9 161 61.5
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 6.1e-55 217.6 161 60.9
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 6.1e-55 217.6 161 62.1
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.0e-54 216.9 161 60.2
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 1.3e-54 216.5 161 63.4
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.3e-54 215.7 161 60.9
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 3.0e-54 215.3 161 60.2
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 3.0e-54 215.3 161 62.1
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 6.7e-54 214.2 161 60.9
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.9e-53 212.6 161 60.2
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 2.5e-53 212.2 161 60.9
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 3.3e-53 211.8 161 62.1
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 3.3e-53 211.8 161 60.2
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 5.7e-53 211.1 161 63.4
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 7.4e-53 210.7 161 60.2
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 7.4e-53 210.7 161 57.8
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 7.4e-53 210.7 161 60.9
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 9.7e-53 210.3 137 71.5
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 2.2e-52 209.1 165 60.6
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 4.8e-52 208.0 161 59.0
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 9.1e-51 203.8 160 57.5
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 2.6e-50 202.2 161 57.1
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 2.6e-50 202.2 161 57.1
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 4.5e-50 201.4 167 57.5
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 1.3e-49 199.9 161 56.5
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.7e-49 199.5 161 58.4
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 3.8e-49 198.4 161 60.9
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 8.5e-49 197.2 161 57.1
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 2.5e-48 195.7 161 56.5
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 5.5e-48 194.5 164 56.1
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 9.4e-48 193.7 161 55.9
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 1.6e-47 193.0 161 56.5
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 6.1e-47 191.0 134 62.7
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 7.9e-47 190.7 160 57.5
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 2.3e-46 189.1 161 55.3
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 2.3e-46 189.1 161 56.5
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 3.0e-46 188.7 161 55.3
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 3.9e-46 188.3 161 54.7
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 7.4e-45 184.1 165 55.2
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 2.2e-44 182.6 161 53.4
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 3.7e-44 181.8 162 53.1
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 3.7e-44 181.8 162 54.3
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 6.3e-44 181.0 161 54.0
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 1.1e-43 180.3 161 53.4
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 1.8e-43 179.5 161 55.3
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 3.1e-43 178.7 161 53.4
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.2e-42 176.8 161 52.2
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.6e-42 175.6 162 51.2
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.6e-42 175.6 162 51.2
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 4.5e-42 174.9 162 50.6
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.5e-42 174.9 162 50.6
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 7.7e-42 174.1 168 51.2
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 7.7e-42 174.1 168 51.2
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.3e-41 173.3 162 51.9
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 2.9e-41 172.2 164 50.6
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 1.1e-40 170.2 162 51.9
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 1.4e-40 169.9 163 50.9
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 2.5e-40 169.1 163 49.7
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 4.2e-40 168.3 203 42.9
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 4.7e-39 164.9 105 67.6
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 1.0e-38 163.7 162 47.5
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 1.0e-38 163.7 162 48.8
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 1.4e-38 163.3 105 69.5
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 1.8e-38 162.9 162 51.2
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 3.9e-38 161.8 162 48.1
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 5.2e-38 161.4 161 46.6
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 6.7e-38 161.0 162 50.6
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 5.7e-37 157.9 166 48.2
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.1e-35 153.7 154 48.1
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 4.1e-35 151.8 105 65.7
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 5.9e-34 147.9 105 63.8
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 7.2e-32 141.0 162 43.8
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 7.2e-32 141.0 92 73.9
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.3e-30 136.0 104 57.7
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 2.3e-30 136.0 159 47.2
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 1.2e-29 133.7 118 54.2
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 1.0e-22 110.5 94 56.4
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.0e-22 109.0 61 77.0
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.0e-21 106.3 59 76.3
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 3.3e-16 89.0 63 63.5
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 1.3e-12 77.0 102 41.2
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.3e-12 77.0 102 41.2
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 1.7e-09 66.6 31 87.1
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.9e-08 63.2 29 79.3
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 9.5e-08 60.8 53 45.3
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 3.6e-07 58.9 29 79.3


User provided reference genes

Program Settings