Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 3.3e-155 551.6 264 100.0
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 8.2e-130 467.2 266 82.7
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 1.5e-128 463.0 264 81.4
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 6.5e-127 457.6 265 80.8
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 1.1e-121 440.3 264 75.8
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 7.2e-118 427.6 264 73.5
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 6.1e-117 424.5 264 73.1
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.7e-114 416.4 264 72.0
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 4.8e-114 414.8 264 72.0
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 8.2e-114 414.1 264 72.3
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 8.2e-114 414.1 264 72.0
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 2.2e-111 406.0 264 69.3
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 4.2e-110 401.7 262 69.8
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 9.4e-110 400.6 264 68.9
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 3.6e-109 398.7 253 70.0
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.0e-108 397.1 253 70.4
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 3.0e-108 395.6 270 68.5
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 5.1e-108 394.8 254 70.9
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 6.7e-108 394.4 256 70.3
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 8.8e-108 394.0 263 72.2
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 2.6e-107 392.5 258 70.9
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 2.6e-107 392.5 256 69.1
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 4.4e-107 391.7 265 68.3
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 1.3e-106 390.2 256 69.1
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 3.7e-106 388.7 264 68.2
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 8.2e-106 387.5 264 68.6
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.1e-105 387.1 266 67.7
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.1e-105 387.1 264 68.6
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 5.3e-105 384.8 264 66.7
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 5.3e-105 384.8 264 65.9
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 7.0e-105 384.4 250 69.6
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 9.1e-105 384.0 264 67.0
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 5.9e-104 381.3 262 68.7
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 1.7e-103 379.8 262 66.0
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 2.9e-103 379.0 265 66.0
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 1.5e-102 376.7 220 75.9
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 1.4e-100 370.2 265 64.2
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 6.7e-100 367.9 264 65.9
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 8.8e-100 367.5 262 64.9
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 8.8e-100 367.5 268 66.8
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 2.6e-99 365.9 254 68.1
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 7.5e-99 364.4 255 65.9
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 9.7e-99 364.0 263 66.9
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 1.8e-97 359.8 307 57.0
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.3e-97 358.2 261 65.1
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 5.3e-97 358.2 254 65.7
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 5.3e-97 358.2 254 66.1
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 9.1e-97 357.5 261 64.8
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 1.2e-96 357.1 264 63.6
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.2e-96 357.1 261 64.4
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.0e-96 356.3 261 64.8
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 2.0e-96 356.3 265 62.6
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 2.7e-96 355.9 264 64.4
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 7.2e-94 347.8 267 61.8
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 2.7e-93 345.9 265 61.5
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 5.2e-92 341.7 253 63.6
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 7.5e-91 337.8 265 61.9
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 7.5e-91 337.8 265 61.9
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 9.8e-91 337.4 254 60.2
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 9.8e-91 337.4 225 66.7
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.8e-90 335.9 253 63.6
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 2.8e-90 335.9 265 59.2
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 3.7e-90 335.5 264 60.6
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 2.4e-89 332.8 255 60.0
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 5.4e-89 331.6 268 61.6
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 4.5e-88 328.6 219 69.4
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.9e-86 323.2 220 66.4
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 3.6e-85 318.9 266 57.9
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 1.2e-80 303.9 254 58.3
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.3e-79 300.4 254 57.9
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 1.1e-78 297.4 224 61.6
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 9.5e-78 294.3 179 76.0
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 9.8e-75 284.3 228 58.3
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 2.4e-73 279.6 265 52.5
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 7.0e-73 278.1 161 83.2
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 6.6e-71 271.6 177 69.5
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 4.7e-61 238.8 282 48.9
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.7e-58 229.2 169 63.9
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.7e-58 229.2 169 63.9
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 1.4e-57 227.3 179 56.4
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 9.5e-54 214.5 181 59.7
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 3.1e-52 209.5 132 69.7
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 3.3e-46 189.5 122 70.5
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 1.1e-44 184.5 131 65.6
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 3.1e-44 183.0 203 47.3
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 2.1e-40 170.2 143 58.0
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 1.8e-36 157.1 106 67.9
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 1.1e-33 147.9 105 63.8
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.3e-31 141.0 92 73.9
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.9e-30 137.1 110 55.5
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 1.3e-29 134.4 319 30.1
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.6e-29 132.9 319 30.1
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 8.7e-23 111.7 97 55.7
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 5.6e-22 109.0 61 77.0
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.7e-21 106.3 59 76.3
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 3.1e-20 103.2 76 67.1
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 1.4e-17 94.4 110 44.5


User provided reference genes

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