Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 1.7e-267 925.6 538 100.0
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 3.0e-139 499.6 552 59.6
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 2.8e-137 493.0 582 55.0
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 7.5e-130 468.4 557 54.0
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 6.3e-121 438.7 555 52.6
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 1.3e-118 431.0 557 53.5
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 1.4e-115 421.0 556 49.5
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 5.2e-115 419.1 538 52.4
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 5.7e-114 415.6 526 51.5
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 5.7e-114 415.6 547 51.7
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 3.7e-113 412.9 538 52.0
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 4.1e-112 409.5 541 51.0
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 2.3e-110 403.7 582 48.1
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 3.3e-109 399.8 537 50.8
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 4.0e-107 392.9 561 48.3
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 6.8e-107 392.1 555 49.4
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 1.2e-106 391.3 526 51.0
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 2.0e-106 390.6 554 49.1
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 3.4e-106 389.8 567 47.4
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 4.4e-106 389.4 555 48.1
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 6.4e-105 385.6 529 49.7
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 1.2e-103 381.3 557 47.9
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 2.3e-102 377.1 532 49.4
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 3.3e-101 373.2 540 44.6
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 3.3e-101 373.2 578 45.5
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 1.2e-100 371.3 529 49.0
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 1.6e-100 370.9 556 47.1
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 2.1e-100 370.5 562 46.6
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 2.1e-100 370.5 529 48.4
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.6e-100 369.8 555 46.8
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.4e-99 367.9 553 46.8
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 1.8e-99 367.5 553 49.4
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 2.3e-99 367.1 555 46.5
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 3.1e-99 366.7 557 46.9
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 6.8e-99 365.5 551 47.2
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.2e-98 364.8 569 47.8
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 9.8e-98 361.7 513 48.3
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 9.8e-98 361.7 558 48.0
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.7e-97 360.9 522 47.5
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.7e-97 360.9 509 47.7
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 2.9e-97 360.1 549 47.7
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 1.4e-96 357.8 559 48.3
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 2.4e-96 357.1 553 48.5
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 4.1e-96 356.3 561 48.3
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 9.2e-96 355.1 549 45.5
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.2e-95 354.8 549 45.7
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 1.6e-95 354.4 549 45.7
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 1.6e-95 354.4 498 48.4
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 2.7e-95 353.6 521 50.7
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 3.5e-95 353.2 554 47.5
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 3.5e-95 353.2 571 44.8
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 6.0e-95 352.4 475 47.8
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 1.0e-94 351.7 572 46.3
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 1.7e-94 350.9 514 45.1
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.7e-94 350.9 549 45.4
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 2.3e-94 350.5 553 46.5
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 5.6e-93 345.9 539 46.4
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 7.3e-93 345.5 458 49.1
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 9.5e-93 345.1 541 45.8
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 1.6e-92 344.4 552 46.9
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 1.4e-91 341.3 556 44.8
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 1.8e-91 340.9 531 43.9
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 2.3e-91 340.5 527 46.5
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 2.3e-91 340.5 522 44.3
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 6.8e-91 339.0 471 49.3
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 1.2e-90 338.2 542 45.6
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 1.5e-90 337.8 554 46.6
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 2.6e-90 337.0 538 42.8
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 3.4e-90 336.7 540 42.8
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 5.8e-90 335.9 552 43.1
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 7.6e-90 335.5 586 45.1
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 7.6e-90 335.5 545 47.0
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 9.9e-90 335.1 553 43.0
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 1.7e-89 334.3 525 44.0
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 3.7e-89 333.2 538 42.6
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 4.9e-89 332.8 560 45.9
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 6.4e-89 332.4 542 42.1
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.9e-88 330.9 545 46.4
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 1.6e-87 327.8 547 43.0
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 2.7e-87 327.0 547 42.0
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 6.0e-87 325.9 528 41.3
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 7.8e-87 325.5 538 41.6
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 1.3e-86 324.7 408 51.7
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 1.7e-86 324.3 535 44.7
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 3.0e-86 323.6 507 45.2
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 3.9e-86 323.2 544 42.3
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 6.6e-86 322.4 554 41.2
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 6.6e-86 322.4 533 45.8
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 1.5e-85 321.2 549 41.9
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 1.5e-85 321.2 544 42.1
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 1.9e-85 320.9 544 42.1
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 2.5e-85 320.5 539 41.4
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 1.2e-84 318.2 453 46.6
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 6.2e-84 315.8 555 42.5
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 6.2e-84 315.8 392 52.6
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 1.1e-83 315.1 520 43.7
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 2.4e-83 313.9 535 41.9
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 2.4e-83 313.9 523 42.6
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 5.2e-83 312.8 551 43.4
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 5.2e-83 312.8 556 42.1
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 6.8e-83 312.4 511 44.4
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 4.4e-82 309.7 510 42.9
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 7.6e-82 308.9 397 49.1
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 3.8e-81 306.6 544 46.9
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 6.4e-81 305.8 571 41.5
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 5.4e-80 302.8 546 42.5
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 7.1e-80 302.4 506 41.9
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 1.2e-79 301.6 398 54.0
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 1.0e-78 298.5 538 42.6
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 2.3e-78 297.4 644 41.5
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 8.7e-78 295.4 556 43.3
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 3.3e-77 293.5 556 41.7
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 5.6e-77 292.7 468 43.8
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 1.1e-75 288.5 542 40.8
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 3.1e-75 287.0 551 38.8
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 2.0e-74 284.3 534 41.9
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 4.4e-74 283.1 336 53.3
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 8.4e-73 278.9 439 47.6
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 8.4e-73 278.9 453 41.9
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 8.4e-73 278.9 495 41.6
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.4e-72 278.1 540 38.0
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 8.7e-70 268.9 564 38.5
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 2.5e-69 267.3 509 42.0
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 5.6e-69 266.2 555 40.4
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 2.1e-68 264.2 443 42.9
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 4.8e-68 263.1 548 40.3
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 4.8e-68 263.1 553 38.3
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 6.2e-68 262.7 554 38.6
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 1.5e-66 258.1 465 41.7
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 7.6e-66 255.8 494 38.7
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 1.3e-65 255.0 398 46.2
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 1.7e-65 254.6 428 43.2
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 1.4e-64 251.5 583 37.4
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 1.6e-63 248.1 541 39.2
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 3.5e-63 246.9 439 42.6
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 3.0e-62 243.8 428 40.7
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 1.8e-59 234.6 420 39.5
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 1.0e-54 218.8 267 50.9
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 3.1e-51 207.2 395 37.7
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 3.8e-49 200.3 291 49.5
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 2.5e-48 197.6 408 36.5
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 6.3e-44 183.0 395 35.4
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 6.3e-44 183.0 349 39.3
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 8.5e-41 172.6 395 35.4
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 3.2e-40 170.6 395 35.4
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 1.2e-39 168.7 428 34.3
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 4.3e-37 160.2 243 49.4
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 1.7e-36 158.3 426 32.9
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 2.0e-34 151.4 180 51.7
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 7.2e-32 142.9 469 29.6
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 4.7e-31 140.2 187 41.7
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 5.1e-30 136.7 304 36.2
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 7.4e-29 132.9 178 44.4
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.7e-28 131.7 295 35.3
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 4.8e-28 130.2 461 31.5
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 7.7e-26 122.9 148 45.9
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 7.7e-26 122.9 244 38.1
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 3.8e-25 120.6 187 38.0
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 3.8e-25 120.6 181 40.9
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 6.5e-25 119.8 251 34.7
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 6.7e-22 109.8 207 40.1
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 3.8e-17 94.0 94 54.3
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 6.5e-17 93.2 160 40.0
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 2.3e-14 84.7 130 44.6
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 2.0e-13 81.6 72 61.1
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 4.4e-13 80.5 119 49.6
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 2.2e-12 78.2 197 41.6
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 2.8e-12 77.8 179 38.5
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 3.7e-12 77.4 245 33.1
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.8e-11 75.1 137 43.1
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 1.2e-10 72.4 59 62.7
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 4.5e-10 70.5 104 37.5
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 2.9e-09 67.8 120 37.5
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 2.9e-09 67.8 72 51.4
SHI17025 Sapria himalayana HOM05D003929 ORTHO05D004499 9.5e-08 62.8 41 68.3
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 1.0e-06 59.3 94 39.4
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 8.8e-06 56.2 410 24.6


User provided reference genes

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