Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27918 Striga asiatica HOM05D012724 ORTHO05D010595 2.8e-196 688.3 331 100.0
SGA_v2.0_scaffold90G27927 Striga asiatica HOM05D012724 ORTHO05D010595 1.1e-128 463.8 379 66.0
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 4.8e-127 458.4 363 66.9
SGA_v2.0_scaffold90G27929 Striga asiatica HOM05D012724 ORTHO05D010595 4.1e-86 322.4 505 42.8
SGA_v2.0_scaffold39G15154 Striga asiatica HOM05D012724 ORTHO05D010595 4.1e-70 269.2 307 54.4
SGA_v2.0_scaffold90G27931 Striga asiatica HOM05D012724 ORTHO05D010595 1.6e-69 267.3 337 48.1
SGA_v2.0_scaffold7G03729 Striga asiatica HOM05D012724 ORTHO05D010595 5.7e-56 222.2 351 42.7
SGA_v2.0_scaffold7G03749 Striga asiatica HOM05D012724 ORTHO05D010595 8.6e-44 181.8 338 38.5
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 1.1e-43 181.4 319 37.0
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 2.7e-37 160.2 334 36.2
SGA_v2.0_scaffold7G03939 Striga asiatica HOM05D012911 ORTHO05D010595 5.6e-35 152.5 363 35.0
SGA_v2.0_scaffold7G04010 Striga asiatica HOM05D012724 ORTHO05D010595 2.7e-29 133.7 322 33.9
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 2.3e-28 130.6 176 44.9
SGA_v2.0_scaffold7G04012 Striga asiatica HOM05D000449 ORTHO05D010595 4.4e-24 116.3 234 38.0
SGA_v2.0_scaffold100G29621 Striga asiatica HOM05D012911 ORTHO05D010595 4.9e-23 112.8 257 32.7
SGA_v2.0_scaffold7G03932 Striga asiatica HOM05D000002 ORTHO05D010595 1.1e-22 111.7 309 31.7
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 2.4e-22 110.5 336 30.7
SGA_v2.0_scaffold84G26553 Striga asiatica HOM05D012911 ORTHO05D010595 2.4e-22 110.5 356 29.8
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 2.1e-21 107.5 199 35.7
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 2.7e-21 107.1 288 32.3
SGA_v2.0_scaffold84G26560 Striga asiatica HOM05D012911 ORTHO05D010595 5.1e-20 102.8 267 31.1
SGA_v2.0_scaffold100G29617 Striga asiatica HOM05D012911 ORTHO05D010595 6.6e-20 102.4 329 29.5
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 3.3e-19 100.1 288 31.9
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.3e-19 99.8 292 33.9
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 9.6e-19 98.6 262 31.3
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.8e-18 97.1 290 32.8
SGA_v2.0_scaffold100G29662 Striga asiatica HOM05D012911 ORTHO05D010595 6.2e-18 95.9 225 33.3
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-17 95.1 290 32.8
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.1e-17 95.1 261 33.7
SGA_v2.0_scaffold7G03938 Striga asiatica HOM05D012911 ORTHO05D010595 1.1e-17 95.1 153 40.5
SGA_v2.0_scaffold7G04003 Striga asiatica HOM05D012911 ORTHO05D010595 1.5e-16 91.3 198 35.4
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 3.4e-16 90.1 267 30.0
SGA_v2.0_scaffold130G34213 Striga asiatica HOM05D030202 ORTHO05D010595 4.4e-16 89.7 213 28.6
SGA_v2.0_scaffold20G09149 Striga asiatica HOM05D011185 ORTHO05D010595 7.6e-16 89.0 175 35.4
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 2.2e-15 87.4 293 29.7
SGA_v2.0_scaffold7G03843 Striga asiatica HOM05D012724 ORTHO05D010595 3.8e-15 86.7 103 48.5
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 1.9e-14 84.3 219 29.7
Gohir.D10G123300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.3e-14 82.0 238 34.0
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.6e-13 81.3 260 29.2
Gohir.A10G227500 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.7e-13 80.5 308 28.9
SGA_v2.0_scaffold7G03767 Striga asiatica HOM05D012724 ORTHO05D010595 2.7e-13 80.5 137 42.3
Gohir.A10G227601 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.5e-13 80.1 280 30.4
SGA_v2.0_scaffold89G27539 Striga asiatica HOM05D011185 ORTHO05D010595 3.5e-13 80.1 317 27.8
Gohir.D10G241600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.6e-13 79.7 299 30.1
Gorai.011G281100 Gossypium raimondii HOM05D000007 ORTHO05D000039 7.8e-13 79.0 316 28.5
Gohir.D10G241000 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.3e-12 78.2 308 29.9
Gohir.A10G227233 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.7e-12 77.8 309 29.4
Gohir.D10G241100 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.9e-12 76.6 313 28.4
Gorai.011G281200 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.9e-12 76.6 304 29.6
Gorai.011G276700 Gossypium raimondii HOM05D000007 ORTHO05D000039 8.7e-12 75.5 281 31.0
Gohir.D10G241008 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-11 75.1 309 29.4
Gohir.D10G241700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.5e-11 74.7 289 30.8
Gorai.011G276100 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.9e-11 74.3 308 28.6
Gohir.D10G240516 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.3e-11 73.2 310 28.7
SalBow6G4569 Salvia bowleyana HOM05D012950 ORTHO05D005165 4.3e-11 73.2 202 31.7
SalBow6G1123 Salvia bowleyana HOM05D012950 ORTHO05D005165 5.6e-11 72.8 269 30.1
SGA_v2.0_scaffold16G07511 Striga asiatica HOM05D000007 ORTHO05D000039 5.6e-11 72.8 312 26.3
SGA_v2.0_scaffold24G10254 Striga asiatica HOM05D011185 ORTHO05D010595 7.3e-11 72.4 255 29.4
SalBow1G7714 Salvia bowleyana HOM05D012950 ORTHO05D005165 1.6e-10 71.2 135 34.8
Dinv06537 Davidia involucrata HOM05D000007 ORTHO05D000039 2.1e-10 70.9 243 26.7
SalBow6G5960 Salvia bowleyana HOM05D012950 ORTHO05D005165 2.1e-10 70.9 202 31.7
vmacro17342 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 2.1e-10 70.9 121 38.0
SGA_v2.0_scaffold90G27922 Striga asiatica HOM05D012724 ORTHO05D010595 2.8e-10 70.5 85 49.4
Gorai.011G276900 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.6e-10 70.1 303 28.4
MD17G1255300 Malus domestica HOM05D000007 ORTHO05D000039 3.6e-10 70.1 339 25.4
vmacro04327 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 3.6e-10 70.1 164 31.1
Gohir.A10G227300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.4e-09 68.2 234 29.5
Medtr8g012090 Medicago truncatula HOM05D000007 ORTHO05D000039 1.4e-09 68.2 118 36.4
PSO339G4195 Papaver somniferum HOM05D000007 ORTHO05D000017 3.1e-09 67.0 248 29.4
Psat2g005280 Pisum sativum HOM05D000007 ORTHO05D000039 3.1e-09 67.0 345 24.1
SalBow6G4842 Salvia bowleyana HOM05D012950 ORTHO05D000017 5.3e-09 66.2 281 28.5
Lj1g0012932 Lotus japonicus HOM05D000007 ORTHO05D000039 6.9e-09 65.9 255 23.5
SalBow3G4328 Salvia bowleyana HOM05D000412 ORTHO05D000429 6.9e-09 65.9 263 28.1
SalBow3G4636 Salvia bowleyana HOM05D000412 ORTHO05D000429 6.9e-09 65.9 260 28.5
SalBow3G2064 Salvia bowleyana HOM05D000412 ORTHO05D000429 9.0e-09 65.5 294 27.6
COL.COLO4_15716 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.5e-08 64.7 274 25.9
Medtr8g035690 Medicago truncatula HOM05D000007 ORTHO05D000039 1.5e-08 64.7 188 26.6
Gorai.011G274400 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.6e-08 63.9 315 26.3
TWI23G0750 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.6e-08 63.9 263 25.5
Oeu025158.1 Olea europaea HOM05D000007 ORTHO05D000039 7.6e-08 62.4 216 28.2
Gohir.D10G238608 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.9e-08 62.0 317 26.2
PSO478G3700 Papaver somniferum HOM05D000007 ORTHO05D000017 9.9e-08 62.0 250 28.0
PSO832G0042 Papaver somniferum HOM05D000007 ORTHO05D000017 9.9e-08 62.0 150 33.3
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.3e-07 61.6 266 27.1
Ca_22994_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 1.7e-07 61.2 123 34.1
Ca_31000_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 1.7e-07 61.2 123 34.1
Lj1A1095T30 Lonicera japonica HOM05D000007 ORTHO05D000039 1.7e-07 61.2 273 25.6
AT2G27520 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.2e-07 60.8 162 31.5
Dinv06536 Davidia involucrata HOM05D000007 ORTHO05D000039 2.2e-07 60.8 293 25.3
Psat2g002560 Pisum sativum HOM05D000007 ORTHO05D000039 2.2e-07 60.8 171 26.3
SalBow3G1233 Salvia bowleyana HOM05D000412 ORTHO05D000429 2.2e-07 60.8 179 31.8
Dinv24586 Davidia involucrata HOM05D000007 ORTHO05D000039 2.9e-07 60.5 300 27.3
PSO478G2403 Papaver somniferum HOM05D000007 ORTHO05D000017 2.9e-07 60.5 150 33.3
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.9e-07 60.5 283 28.3
AT3G21170 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.8e-07 60.1 61 45.9
Lj1g0024650 Lotus japonicus HOM05D000007 ORTHO05D000039 3.8e-07 60.1 149 28.2
SalBow6G2994 Salvia bowleyana HOM05D000007 ORTHO05D000017 3.8e-07 60.1 200 30.5
DCAR_017067 Daucus carota HOM05D000007 ORTHO05D000017 4.9e-07 59.7 131 30.5
Lj8C20T2 Lonicera japonica HOM05D000007 ORTHO05D000039 4.9e-07 59.7 311 25.4
PSO339G1645 Papaver somniferum HOM05D000007 ORTHO05D000017 4.9e-07 59.7 224 25.9
Thecc.10G169100 Theobroma cacao HOM05D000007 ORTHO05D000039 4.9e-07 59.7 284 26.4
CAN.G46.3 Capsicum annuum HOM05D000007 ORTHO05D000039 6.4e-07 59.3 256 25.8
Cfa017234 Carpinus fangiana HOM05D000007 ORTHO05D000039 8.4e-07 58.9 260 24.2
Gohir.A10G227401 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.4e-07 58.9 175 30.3
Medtr5g086590 Medicago truncatula HOM05D000007 ORTHO05D000039 8.4e-07 58.9 131 31.3
PSO384G4310 Papaver somniferum HOM05D000007 ORTHO05D000017 8.4e-07 58.9 143 31.5
AT3G21120 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-06 58.5 119 34.5
AUR62010297 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.1e-06 58.5 293 26.6
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-06 58.5 283 27.2
PSO170G0480 Papaver somniferum HOM05D000007 ORTHO05D000017 1.1e-06 58.5 118 33.1
Ca_23780_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 1.4e-06 58.2 170 27.6
Lj1C663T4 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-06 58.2 288 25.3
Lj3P398T11 Lonicera japonica HOM05D000007 ORTHO05D000017 1.4e-06 58.2 199 27.1
RcHm_v2.0_Chr1g0321721 Rosa chinensis HOM05D000007 ORTHO05D000039 1.4e-06 58.2 220 27.3
A06p37200 Brassica napus HOM05D005941 ORTHO05D007879 1.9e-06 57.8 225 26.2
BraA06t26643Z Brassica rapa HOM05D005941 ORTHO05D007879 1.9e-06 57.8 225 26.2
Haze_20972 Corylus avellana HOM05D000007 ORTHO05D000039 1.9e-06 57.8 262 23.7
Medtr5g097680 Medicago truncatula HOM05D000007 ORTHO05D000039 1.9e-06 57.8 161 29.2
Gorai.013G256600 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.4e-06 57.4 236 28.8
Oeu025157.1 Olea europaea HOM05D000007 ORTHO05D000039 2.4e-06 57.4 215 28.4
FAN19G0854 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.2e-06 57.0 212 26.4
PSO675G7348 Papaver somniferum HOM05D000007 ORTHO05D000017 3.2e-06 57.0 147 33.3
Peaxi162Scf00033g00214 Petunia axillaris HOM05D000007 ORTHO05D000039 3.2e-06 57.0 187 25.1
TWI59G0311 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.2e-06 57.0 288 25.7
Ca_19548_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 4.2e-06 56.6 241 24.1
Ca_29970_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 4.2e-06 56.6 241 24.1
Medtr7g017040 Medicago truncatula HOM05D000007 ORTHO05D000039 4.2e-06 56.6 200 24.5
Psat0s7414g0040 Pisum sativum HOM05D000007 ORTHO05D000039 4.2e-06 56.6 92 31.5
RcHm_v2.0_Chr2g0154611 Rosa chinensis HOM05D000007 ORTHO05D000017 4.2e-06 56.6 180 27.8
SalBow4G3343 Salvia bowleyana HOM05D000412 ORTHO05D000429 4.2e-06 56.6 214 27.6
ECA233G5519 Erigeron canadensis HOM05D000007 ORTHO05D000039 5.4e-06 56.2 206 29.1
Potri.001G129400 Populus trichocarpa HOM05D000007 ORTHO05D000521 5.4e-06 56.2 174 27.6
SalBow3G2588 Salvia bowleyana HOM05D011515 ORTHO05D005165 5.4e-06 56.2 236 25.0
Cc04_g11930 Coffea canephora HOM05D000007 ORTHO05D000017 7.1e-06 55.8 234 24.8
Haze_02867 Corylus avellana HOM05D000007 ORTHO05D000039 7.1e-06 55.8 191 27.7
PSO339G2134 Papaver somniferum HOM05D000007 ORTHO05D000017 7.1e-06 55.8 114 34.2
PSO384G4561 Papaver somniferum HOM05D000007 ORTHO05D000017 7.1e-06 55.8 219 26.0
PSO478G3572 Papaver somniferum HOM05D000007 ORTHO05D000017 7.1e-06 55.8 146 31.5
Psat2g002840 Pisum sativum HOM05D000007 ORTHO05D000039 7.1e-06 55.8 105 29.5
Ciclev10028647m.g Citrus clementina HOM05D000007 ORTHO05D000039 9.3e-06 55.5 254 29.5
COL.COLO4_03624 Corchorus olitorius HOM05D000007 ORTHO05D000039 9.3e-06 55.5 189 27.5
FAN23G0826 Fragaria x ananassa HOM05D000007 ORTHO05D005026 9.3e-06 55.5 230 26.1
PSO210G2189 Papaver somniferum HOM05D000007 ORTHO05D000017 9.3e-06 55.5 145 32.4
PSO675G4948 Papaver somniferum HOM05D000007 ORTHO05D000017 9.3e-06 55.5 143 31.5
SGA_v2.0_scaffold7G03732 Striga asiatica HOM05D003543 ORTHO05D004112 9.3e-06 55.5 195 28.7


User provided reference genes

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