Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 0.0e+00 1327.0 690 100.0
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 9.4e-186 654.4 707 53.9
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 6.5e-179 631.7 702 54.3
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 1.2e-172 610.9 539 60.3
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 4.5e-172 609.0 710 51.0
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 8.0e-161 571.6 694 49.4
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 4.9e-158 562.4 618 50.2
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 1.9e-157 560.5 674 49.7
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 1.3e-155 554.3 614 50.3
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 1.9e-154 550.4 621 49.8
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 3.1e-152 543.1 655 47.6
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 8.9e-152 541.6 694 46.0
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 1.5e-151 540.8 707 46.8
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 3.4e-151 539.7 712 46.1
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 4.4e-151 539.3 634 49.2
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 1.3e-150 537.7 710 47.0
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 1.7e-150 537.3 692 46.4
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 1.7e-150 537.3 697 45.9
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 1.7e-150 537.3 628 49.4
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 2.9e-150 536.6 621 47.8
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 4.9e-150 535.8 704 45.7
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 4.9e-150 535.8 693 46.6
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 1.1e-149 534.6 707 46.5
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 1.1e-149 534.6 634 48.7
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 4.1e-149 532.7 702 45.2
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 4.1e-149 532.7 620 47.7
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 9.2e-149 531.6 658 47.7
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 9.2e-149 531.6 656 47.6
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 1.6e-148 530.8 622 47.3
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 1.6e-148 530.8 622 47.3
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 2.1e-148 530.4 616 47.4
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 2.7e-148 530.0 615 48.0
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 4.6e-148 529.3 645 47.6
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 7.8e-148 528.5 716 45.7
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 1.3e-147 527.7 668 46.3
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 1.7e-147 527.3 628 46.8
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 2.3e-147 526.9 619 48.0
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 3.9e-147 526.2 694 45.5
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 5.1e-147 525.8 706 44.8
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 8.6e-147 525.0 699 46.4
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 1.9e-146 523.9 641 46.8
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 3.3e-146 523.1 619 48.0
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 3.3e-146 523.1 616 49.2
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 3.3e-146 523.1 701 44.5
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 5.6e-146 522.3 701 46.6
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 2.1e-145 520.4 620 47.3
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 2.8e-145 520.0 619 48.1
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 6.2e-145 518.8 617 47.6
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 6.2e-145 518.8 575 49.9
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 6.2e-145 518.8 618 46.8
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 4.0e-144 516.2 690 44.6
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 2.0e-143 513.8 621 47.8
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 2.0e-143 513.8 695 43.6
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 2.6e-143 513.5 704 44.5
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 3.4e-143 513.1 643 46.7
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 5.8e-143 512.3 636 47.2
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 9.9e-143 511.5 705 44.1
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 2.2e-142 510.4 612 47.2
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 2.2e-142 510.4 558 50.7
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 2.9e-142 510.0 676 45.3
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 4.9e-142 509.2 633 46.4
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.1e-141 508.1 610 46.9
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 1.1e-141 508.1 693 42.7
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 1.4e-141 507.7 695 44.2
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 2.4e-141 506.9 702 43.7
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.2e-140 504.6 700 44.3
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 4.6e-140 502.7 688 44.3
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 7.8e-140 501.9 609 46.8
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 7.8e-140 501.9 562 47.5
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 7.8e-140 501.9 710 43.0
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.3e-139 501.1 609 46.8
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 1.7e-139 500.7 576 48.8
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 3.9e-139 499.6 692 43.9
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 3.9e-139 499.6 650 45.1
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 5.1e-139 499.2 605 47.4
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 8.6e-139 498.4 623 46.4
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.1e-138 498.0 627 46.4
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 1.9e-138 497.3 647 46.5
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 2.5e-138 496.9 724 42.5
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 7.3e-138 495.4 619 47.3
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 1.2e-137 494.6 612 45.9
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 3.6e-137 493.0 691 44.7
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 8.1e-137 491.9 610 46.2
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 1.8e-136 490.7 623 45.4
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 4.9e-134 482.6 576 45.3
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 1.1e-133 481.5 616 44.8
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 1.4e-133 481.1 592 47.0
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.9e-133 480.7 698 41.7
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 1.9e-133 480.7 615 44.2
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 1.9e-133 480.7 592 46.5
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 7.1e-133 478.8 550 47.5
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 1.2e-132 478.0 576 45.7
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 2.1e-132 477.2 613 43.9
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 2.7e-132 476.9 565 45.5
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 2.7e-132 476.9 653 43.2
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 4.6e-132 476.1 556 46.0
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 4.6e-132 476.1 654 43.1
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 6.0e-132 475.7 554 45.7
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 7.8e-132 475.3 565 45.5
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 1.7e-131 474.2 659 42.6
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 2.3e-131 473.8 697 42.0
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 5.1e-131 472.6 696 40.9
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 1.1e-130 471.5 615 43.6
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 4.3e-130 469.5 615 43.4
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 9.6e-130 468.4 626 43.1
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 5.3e-128 462.6 629 42.8
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 5.3e-128 462.6 626 45.5
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 1.1e-125 454.9 602 44.9
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 3.2e-125 453.4 613 42.4
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 1.3e-123 448.0 523 48.6
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 2.3e-123 447.2 611 43.2
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 5.1e-123 446.0 655 41.4
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 3.8e-118 429.9 689 39.8
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 1.9e-117 427.6 462 50.9
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 1.7e-110 404.4 600 39.7
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 1.2e-108 398.3 560 42.1
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 1.2e-108 398.3 637 37.8
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.3e-107 394.8 691 37.5
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 3.6e-92 343.6 585 38.1
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 3.0e-91 340.5 582 37.5
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.3e-89 335.1 686 34.4
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 1.4e-75 288.5 236 58.9
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 1.8e-75 288.1 626 34.8
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 6.7e-75 286.2 270 51.9
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 1.5e-74 285.0 417 43.4
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 2.0e-74 284.6 571 34.0
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 9.7e-74 282.3 519 35.1
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 6.3e-73 279.6 570 33.5
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 2.0e-71 274.6 422 38.2
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 5.9e-71 273.1 457 37.0
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 5.0e-70 270.0 337 44.2
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 4.4e-58 230.3 223 51.1
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 1.2e-42 179.1 268 41.4
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 1.9e-40 171.8 127 61.4
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 4.2e-16 90.9 312 28.2
SHI17314 Sapria himalayana HOM05D005308 ORTHO05D006494 2.3e-06 58.5 50 58.0


User provided reference genes

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