Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27902 Striga asiatica HOM05D006234 ORTHO05D007813 1.4e-142 509.6 257 100.0
Migut.O00096 Erythranthe guttata HOM05D006234 ORTHO05D007813 1.0e-108 397.1 273 76.2
SalBow5G5218 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.6e-106 389.8 273 75.8
MSTRG.9679 Avicennia marina HOM05D006234 ORTHO05D007813 6.4e-95 351.3 276 68.8
Oeu020907.1 Olea europaea HOM05D006234 ORTHO05D007813 6.4e-95 351.3 292 67.1
CSS0048541 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 1.3e-92 343.6 290 64.8
CSS0047520 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 1.7e-92 343.2 290 64.8
Cc04_g12080 Coffea canephora HOM05D006234 ORTHO05D007813 3.0e-92 342.4 253 72.3
Rhsim12G0165600 Rhododendron simsii HOM05D006234 ORTHO05D007813 8.6e-92 340.9 284 66.2
SalBow6G2400 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.1e-91 340.5 270 68.5
AUR62030948 Chenopodium quinoa HOM05D006234 ORTHO05D007813 4.3e-91 338.6 243 73.7
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla HOM05D006234 ORTHO05D007813 7.3e-91 337.8 246 72.4
SGA_v2.0_scaffold114G31825 Striga asiatica HOM05D006234 ORTHO05D007813 1.2e-90 337.0 275 66.2
Nitab4.5_0000025g0560 Nicotiana tabacum HOM05D006234 ORTHO05D007813 3.6e-90 335.5 283 65.7
COL.COLO4_30066 Corchorus olitorius HOM05D006234 ORTHO05D007813 2.3e-89 332.8 297 62.6
Sopen12g011710 Solanum pennellii HOM05D006234 ORTHO05D007813 4.0e-89 332.0 236 73.3
vmacro16618 Vaccinium macrocarpon HOM05D006234 ORTHO05D007813 6.8e-89 331.3 312 58.7
Gorai.008G296000 Gossypium raimondii HOM05D006234 ORTHO05D007813 1.5e-88 330.1 292 63.0
Gohir.A12G274800 Gossypium hirsutum HOM05D006234 ORTHO05D007813 2.0e-88 329.7 292 63.0
Lj9A446T64 Lonicera japonica HOM05D006234 ORTHO05D007813 2.0e-88 329.7 289 65.1
EL10Ac5g10733 Beta vulgaris HOM05D006234 ORTHO05D007813 3.4e-88 328.9 243 71.2
Gohir.D12G275500 Gossypium hirsutum HOM05D006234 ORTHO05D007813 3.4e-88 328.9 292 62.7
GSVIVG01007727001 Vitis vinifera HOM05D006234 ORTHO05D007813 3.4e-88 328.9 236 74.2
Sc10g0010120 Simmondsia chinensis HOM05D006234 ORTHO05D007813 4.4e-88 328.6 211 78.7
Atru.chr9.2492 Acer truncatum HOM05D006234 ORTHO05D007813 7.5e-88 327.8 212 77.4
unitig_60.g25412 Utricularia gibba HOM05D006234 ORTHO05D007813 3.7e-87 325.5 269 66.5
Hund09446 Selenicereus undatus HOM05D006234 ORTHO05D007813 8.3e-87 324.3 246 69.9
Glyma.05G038600 Glycine max HOM05D006234 ORTHO05D007813 1.9e-86 323.2 272 63.2
Nitab4.5_0001514g0060 Nicotiana tabacum HOM05D006234 ORTHO05D007813 1.9e-86 323.2 291 63.9
Potri.012G082300 Populus trichocarpa HOM05D006234 ORTHO05D007813 4.1e-86 322.0 284 63.7
Lalb_Chr13g0297731 Lupinus albus HOM05D006234 ORTHO05D007813 7.0e-86 321.2 241 68.9
Peaxi162Scf00255g01121 Petunia axillaris HOM05D006234 ORTHO05D007813 7.0e-86 321.2 281 63.3
TPR.G37565 Trifolium pratense HOM05D006234 ORTHO05D007813 7.0e-86 321.2 270 64.8
Medtr4g105610 Medicago truncatula HOM05D006234 ORTHO05D007813 1.2e-85 320.5 270 64.1
Sabra12G0058900 Salix brachista HOM05D006234 ORTHO05D007813 1.2e-85 320.5 283 62.9
Thecc.03G014200 Theobroma cacao HOM05D006234 ORTHO05D007813 1.2e-85 320.5 299 60.9
Hund02751 Selenicereus undatus HOM05D006234 ORTHO05D007813 2.7e-85 319.3 241 70.1
CiPaw.12G027800 Carya illinoinensis HOM05D006234 ORTHO05D007813 6.0e-85 318.2 241 70.1
Eucgr.K02833 Eucalyptus grandis HOM05D006234 ORTHO05D007813 1.0e-84 317.4 218 75.2
Glyma.17G088400 Glycine max HOM05D006234 ORTHO05D007813 1.3e-84 317.0 238 68.9
Potri.015G078100 Populus trichocarpa HOM05D006234 ORTHO05D007813 1.3e-84 317.0 288 62.8
PGR044G0892 Punica granatum HOM05D006234 ORTHO05D007813 1.5e-83 313.5 294 60.9
Ah.02g110560 Amaranthus hybridus HOM05D006234 ORTHO05D007813 1.9e-83 313.2 248 69.0
CsaV3_1G008570 Cucumis sativus L. HOM05D006234 ORTHO05D007813 1.9e-83 313.2 289 61.6
Lj4g0025683 Lotus japonicus HOM05D006234 ORTHO05D007813 1.9e-83 313.2 269 63.6
PGSC0003DMG401026661 Solanum tuberosum HOM05D006234 ORTHO05D007813 1.9e-83 313.2 248 68.1
MELO3C002271.2 Cucumis melo HOM05D006234 ORTHO05D007813 2.5e-83 312.8 289 61.2
CANSAT80G1835 Cannabis sativa HOM05D006234 ORTHO05D007813 4.3e-83 312.0 210 76.7
Manes.14G064600 Manihot esculenta HOM05D006234 ORTHO05D007813 5.6e-83 311.6 252 67.9
Cfa019148 Carpinus fangiana HOM05D006234 ORTHO05D007813 7.3e-83 311.2 213 76.1
Ciclev10021475m.g Citrus clementina HOM05D006234 ORTHO05D007813 1.6e-82 310.1 218 72.0
Haze_07514 Corylus avellana HOM05D006234 ORTHO05D007813 1.6e-82 310.1 213 75.6
Nn4g22716 Nelumbo nucifera HOM05D006234 ORTHO05D007813 1.6e-82 310.1 276 62.0
arahy.Tifrunner.gnm1.ann1.ZL3RZ2 Arachis hypogaea HOM05D006234 ORTHO05D007813 2.1e-82 309.7 236 69.1
Sed0024030 Sechium edule HOM05D006234 ORTHO05D007813 2.1e-82 309.7 241 68.5
arahy.Tifrunner.gnm1.ann1.I5PLYK Arachis hypogaea HOM05D006234 ORTHO05D007813 2.8e-82 309.3 236 69.5
MD06G1172700 Malus domestica HOM05D006234 ORTHO05D007813 2.8e-82 309.3 291 60.8
Phvul.003G201500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 3.6e-82 308.9 236 68.6
FAN08G0279 Fragaria x ananassa HOM05D006234 ORTHO05D007813 2.3e-81 306.2 293 59.7
Sabra15G0102700 Salix brachista HOM05D006234 ORTHO05D007813 2.3e-81 306.2 269 63.2
QL10p010716 Quercus lobata HOM05D006234 ORTHO05D007813 3.1e-81 305.8 249 65.9
MD14G1178600 Malus domestica HOM05D006234 ORTHO05D007813 1.5e-80 303.5 241 67.6
FAN04G0097 Fragaria x ananassa HOM05D006234 ORTHO05D007813 2.6e-80 302.8 283 61.1
QL10p011029 Quercus lobata HOM05D006234 ORTHO05D007813 7.5e-80 301.2 253 64.4
SalBow6G3516 Salvia bowleyana HOM05D006234 ORTHO05D007813 9.8e-80 300.8 187 80.7
Lsat_1_v5_gn_5_15020 Lactuca sativa HOM05D006234 ORTHO05D007813 3.7e-79 298.9 218 70.2
Aqoxy3G02888 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 4.9e-79 298.5 237 67.9
Zm00001eb345780 Zea mays HOM05D006234 ORTHO05D007813 1.1e-78 297.4 215 70.2
RcHm_v2.0_Chr7g0193391 Rosa chinensis HOM05D006234 ORTHO05D007813 1.9e-78 296.6 288 59.4
FvH4_5g05440 Fragaria vesca HOM05D006234 ORTHO05D007813 3.2e-78 295.8 279 60.2
FAN18G0739 Fragaria x ananassa HOM05D006234 ORTHO05D007813 3.2e-78 295.8 279 60.2
HanXRQChr05g0155761 Helianthus annuus HOM05D006234 ORTHO05D007813 4.1e-78 295.4 212 71.7
THA.LOC104809262 Tarenaya hassleriana HOM05D006234 ORTHO05D007813 1.2e-77 293.9 268 60.4
AUR62008196 Chenopodium quinoa HOM05D006234 ORTHO05D007813 2.1e-77 293.1 227 69.2
FAN18G3270 Fragaria x ananassa HOM05D006234 ORTHO05D007813 2.7e-77 292.7 279 59.9
PSO063G7211 Papaver somniferum HOM05D006234 ORTHO05D007813 6.0e-77 291.6 205 71.7
PSO832G4587 Papaver somniferum HOM05D006234 ORTHO05D007813 1.3e-76 290.4 216 68.5
HPP92_001303 Vanilla planifolia HOM05D006234 ORTHO05D007813 1.1e-75 287.3 212 68.9
FAN13G1809 Fragaria x ananassa HOM05D006234 ORTHO05D007813 3.3e-75 285.8 194 73.7
ClCG01G013210 Citrullus lanatus HOM05D006234 ORTHO05D007813 5.6e-75 285.0 229 67.7
Duzib205G1984 Durio zibethinus HOM05D006234 ORTHO05D007813 3.6e-74 282.3 283 56.9
VMungo1215G2331 Vigna mungo HOM05D006234 ORTHO05D007813 3.6e-74 282.3 202 74.8
Lj1g0005957 Lotus japonicus HOM05D006234 ORTHO05D007813 6.2e-74 281.6 277 56.3
ECA246G1070 Erigeron canadensis HOM05D006234 ORTHO05D007813 8.1e-74 281.2 218 67.0
Os05g0170800 Oryza sativa ssp. japonica HOM05D006234 ORTHO05D007813 1.4e-73 280.4 210 68.1
TAR629G2947 Trochodendron aralioides HOM05D006234 ORTHO05D007813 5.2e-73 278.5 276 58.0
VMungo1309G2926 Vigna mungo HOM05D006234 ORTHO05D007813 6.8e-73 278.1 235 60.4
TAR622G1324 Trochodendron aralioides HOM05D006234 ORTHO05D007813 1.2e-72 277.3 236 65.3
Glyma.04G184400 Glycine max HOM05D006234 ORTHO05D007813 3.4e-72 275.8 240 60.0
MBI10_g27998_MAGBIO Magnolia biondii HOM05D006234 ORTHO05D007813 5.8e-72 275.0 209 70.8
Zm00001eb124590 Zea mays HOM05D006234 ORTHO05D007813 5.8e-72 275.0 201 69.7
CAN.G263.4 Capsicum annuum HOM05D006234 ORTHO05D007813 1.4e-70 270.4 200 71.0
Phvul.009G177500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 1.4e-70 270.4 237 59.1
Glyma.06G181500 Glycine max HOM05D006234 ORTHO05D007813 2.4e-70 269.6 263 55.1
Cpa.g.sc685.2 Carica papaya HOM05D006234 ORTHO05D007813 9.2e-70 267.7 145 89.0
SEGI_35494 Sequoiadendron giganteum HOM05D006234 ORTHO05D007813 1.0e-68 264.2 209 65.1
Manes.06G106000 Manihot esculenta HOM05D006234 ORTHO05D007813 3.9e-68 262.3 215 67.4
arahy.Tifrunner.gnm1.ann1.HN9NVD Arachis hypogaea HOM05D006234 ORTHO05D007813 5.1e-68 261.9 271 52.8
HanXRQChr05g0132691 Helianthus annuus HOM05D006234 ORTHO05D007813 2.0e-64 250.0 247 56.7
arahy.Tifrunner.gnm1.ann1.68I129 Arachis hypogaea HOM05D006234 ORTHO05D007813 2.2e-63 246.5 197 64.0
Nn3g16823 Nelumbo nucifera HOM05D006234 ORTHO05D007813 6.4e-63 245.0 266 54.1
CDE04G1656 Ceratophyllum demersum HOM05D006234 ORTHO05D007813 7.1e-62 241.5 239 56.5
Dinv38575 Davidia involucrata HOM05D006234 ORTHO05D007813 5.6e-59 231.9 227 59.9
Actinidia19103 Actinidia chinensis HOM05D006234 ORTHO05D007813 4.6e-53 212.2 115 87.0
Pp3c21_1540 Physcomitrium patens HOM05D006234 ORTHO05D007813 2.4e-49 199.9 247 48.2
Prupe.5G172000 Prunus persica HOM05D006234 ORTHO05D007813 6.9e-49 198.4 226 54.0
SalBow1G2571 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.3e-47 194.1 158 67.1
Aqoxy6G01962 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 1.4e-41 174.1 134 68.7
SalBow8G5646 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.7e-31 140.6 163 53.4
MCO05G167 Micromonas commoda HOM05D006234 ORTHO05D007813 2.2e-31 140.2 176 44.3
Cre16.g650500 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 1.0e-28 131.3 200 39.0
Ca_21933_v3 Cicer arietinum L. HOM05D000957 ORTHO05D000754 4.8e-26 122.5 149 54.4
Psat5g000720 Pisum sativum HOM05D006234 ORTHO05D007813 2.6e-24 116.7 146 53.4
Solyc12g021360.3 Solanum lycopersicum HOM05D006234 ORTHO05D007813 5.9e-24 115.5 132 54.5
SalBow1G3204 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.2e-23 113.6 81 71.6
Lalb_Chr08g0236591 Lupinus albus HOM05D006234 ORTHO05D007813 5.0e-23 112.5 69 73.9
ATR1091G013 Amborella trichopoda HOM05D006234 ORTHO05D007813 4.6e-21 105.9 152 46.1
DCAR_026145 Daucus carota HOM05D007767 ORTHO05D010057 1.3e-18 97.8 131 50.4
Cre09.g387134 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 4.5e-16 89.4 134 37.3
Actinidia19102 Actinidia chinensis HOM05D006234 ORTHO05D007813 1.0e-15 88.2 118 47.5
PRCOL_00003688 Prasinoderma coloniale HOM05D001043 ORTHO05D006432 3.8e-15 86.3 107 42.1
arahy.Tifrunner.gnm1.ann1.AH97YV Arachis hypogaea HOM05D006234 ORTHO05D007813 3.2e-14 83.2 56 69.6
SalBow6G2479 Salvia bowleyana HOM05D006234 ORTHO05D007813 6.7e-12 75.5 83 56.6
Lalb_Chr08g0236581 Lupinus albus HOM05D006234 ORTHO05D007813 6.3e-10 68.9 80 52.5
Actinidia27085 Actinidia chinensis HOM05D001043 ORTHO05D006432 9.1e-09 65.1 173 35.3
SalBow3G0890 Salvia bowleyana HOM05D001251 ORTHO05D007813 7.7e-08 62.0 31 90.3
PGR142G0751 Punica granatum HOM05D001043 ORTHO05D006432 1.0e-07 61.6 180 31.7
CiPaw.02G052200 Carya illinoinensis HOM05D001043 ORTHO05D006432 5.0e-07 59.3 176 32.4
ECA240G3866 Erigeron canadensis HOM05D001043 ORTHO05D006432 6.5e-07 58.9 190 27.9
HanXRQChr03g0092911 Helianthus annuus HOM05D001043 ORTHO05D006432 6.5e-07 58.9 177 29.9
Atru.chr4.1261 Acer truncatum HOM05D001043 ORTHO05D006432 1.5e-06 57.8 182 30.2
RcHm_v2.0_Chr6g0279701 Rosa chinensis HOM05D006234 ORTHO05D007813 1.9e-06 57.4 53 56.6
AUR62023842 Chenopodium quinoa HOM05D001043 ORTHO05D006432 3.2e-06 56.6 134 29.1
PGR142G3303 Punica granatum HOM05D001043 ORTHO05D006432 7.2e-06 55.5 149 30.2


User provided reference genes

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