Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 0.0e+00 1969.5 985 100.0
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 0.0e+00 1108.6 1089 57.0
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.6e-308 1062.8 1073 56.8
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.3e-284 983.4 978 56.5
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.2e-284 982.6 978 56.5
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 3.4e-245 852.4 955 52.5
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 3.7e-244 849.0 1019 49.0
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.2e-229 800.8 1025 46.0
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.2e-226 790.8 1020 46.0
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 3.2e-219 766.1 1017 45.9
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 7.8e-218 761.5 1128 43.0
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 5.1e-217 758.8 1139 42.8
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 5.6e-216 755.4 1126 42.6
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 3.1e-214 749.6 944 46.0
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.2e-213 747.7 1107 42.6
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 2.0e-213 746.9 894 47.1
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.0e-213 746.9 1132 41.9
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 2.6e-213 746.5 1014 45.0
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 5.8e-213 745.3 1103 42.2
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 1.3e-212 744.2 1132 42.3
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.9e-211 740.3 1149 41.3
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 4.2e-211 739.2 1011 44.8
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 5.4e-211 738.8 1163 41.4
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 2.7e-210 736.5 1195 40.0
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 7.8e-210 734.9 1135 42.2
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 5.1e-209 732.3 1154 41.2
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 6.6e-209 731.9 1117 41.8
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 6.6e-209 731.9 1064 43.9
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.9e-208 730.3 1131 42.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 7.3e-208 728.4 1117 42.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 3.6e-207 726.1 1135 41.6
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.4e-206 724.2 1140 42.1
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 6.9e-206 721.8 1100 41.5
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 9.0e-206 721.5 1150 40.9
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.2e-205 721.1 1086 43.6
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 2.0e-205 720.3 1171 41.8
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.4e-205 719.5 888 46.5
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 3.8e-204 716.1 939 44.2
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 2.4e-203 713.4 1068 42.2
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 2.4e-203 713.4 1089 42.8
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.2e-203 713.0 1178 40.1
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 4.6e-202 709.1 1081 41.6
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 6.0e-202 708.8 1018 44.2
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 1.7e-201 707.2 1155 41.5
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 1.7e-201 707.2 1008 43.9
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 2.3e-201 706.8 1023 42.1
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 7.3e-200 701.8 1019 42.8
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 9.6e-200 701.4 988 43.5
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 2.4e-198 696.8 993 43.7
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.2e-197 694.5 1212 39.4
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 2.2e-196 690.3 1048 41.9
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 7.9e-194 681.8 867 45.8
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 1.0e-193 681.4 1096 40.4
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 1.8e-193 680.6 1127 40.4
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 1.1e-192 677.9 1040 41.2
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 3.3e-192 676.4 1030 42.4
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 7.4e-192 675.2 1128 40.3
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 2.8e-191 673.3 1052 40.5
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 3.7e-191 672.9 1028 41.4
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 1.1e-190 671.4 1028 42.0
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 1.4e-190 671.0 910 44.3
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 3.1e-190 669.8 945 42.5
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 5.3e-190 669.1 1074 40.3
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 5.3e-190 669.1 562 58.5
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 4.5e-189 666.0 1048 41.5
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 7.6e-189 665.2 1076 40.1
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 2.2e-188 663.7 1103 40.5
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 8.4e-188 661.8 1112 39.0
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 2.1e-186 657.1 1068 40.7
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.7e-186 656.8 1096 41.1
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 7.9e-186 655.2 1054 42.0
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 8.7e-185 651.7 1081 39.1
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 1.1e-184 651.4 1051 40.9
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.9e-184 650.6 1060 40.5
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 9.6e-184 648.3 1125 39.6
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 2.1e-183 647.1 1040 40.5
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 3.7e-183 646.4 996 41.8
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 8.2e-183 645.2 1081 39.2
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 1.1e-182 644.8 948 41.9
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 1.5e-181 641.0 556 56.1
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 5.8e-181 639.0 1001 41.7
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 7.6e-181 638.6 1021 41.2
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 7.6e-181 638.6 1088 38.7
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 7.6e-181 638.6 1086 39.2
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 3.8e-180 636.3 1037 39.3
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 5.0e-180 636.0 994 40.6
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 8.4e-180 635.2 1019 41.1
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 8.4e-180 635.2 1004 41.6
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 1.2e-178 631.3 1075 39.9
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 1.4e-174 617.8 1030 40.1
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 2.4e-174 617.1 558 56.5
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 5.7e-168 595.9 1134 36.9
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 5.7e-168 595.9 1002 41.0
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 1.7e-164 584.3 581 52.2
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 2.8e-159 567.0 571 52.2
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 3.2e-155 553.5 692 47.0
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 9.4e-155 552.0 985 37.5
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 5.2e-153 546.2 856 42.6
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.3e-151 541.6 1047 36.5
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.0e-145 521.9 1125 34.8
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 5.0e-140 503.1 1101 34.5
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.6e-122 443.7 523 48.0
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.0e-121 442.2 418 54.8
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 5.0e-116 423.3 887 35.4
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 3.4e-112 410.6 786 34.2
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 9.2e-110 402.5 853 35.6
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 3.0e-108 397.5 548 41.6
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 5.6e-107 393.3 547 41.3
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 9.5e-107 392.5 535 43.4
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 1.4e-105 388.7 502 40.4
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 3.1e-105 387.5 318 60.1
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 3.1e-105 387.5 792 37.6
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 6.4e-95 353.2 453 43.7
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.1e-67 262.7 686 33.7
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 7.4e-67 260.0 226 56.2
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 9.6e-67 259.6 641 34.5
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 1.5e-64 252.3 232 57.3
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.8e-60 238.8 657 31.7
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 2.6e-27 128.6 272 33.1
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 2.8e-18 98.6 198 32.8
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 4.1e-17 94.7 91 54.9
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.5e-14 86.3 465 25.8
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 6.1e-13 80.9 67 59.7
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 4.0e-12 78.2 333 27.9
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 8.9e-12 77.0 49 69.4
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 8.9e-12 77.0 62 61.3
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 8.9e-12 77.0 49 69.4
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 1.2e-11 76.6 91 45.1
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 9.8e-11 73.6 53 62.3
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.3e-10 73.2 186 32.3
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.0e-08 65.9 157 35.7


User provided reference genes

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