Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 1.2e-101 373.2 192 100.0
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 3.1e-86 322.0 191 85.9
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 4.2e-83 311.6 191 83.2
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 4.2e-83 311.6 191 83.2
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 9.3e-83 310.5 191 82.7
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 6.0e-82 307.8 191 82.2
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 1.0e-81 307.0 191 82.7
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.3e-81 305.8 191 83.2
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 3.0e-81 305.4 192 81.8
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 5.1e-81 304.7 190 84.2
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 5.1e-81 304.7 192 81.2
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 6.7e-81 304.3 191 79.1
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 8.7e-81 303.9 191 81.2
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.1e-80 303.5 192 81.2
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.9e-80 302.8 191 82.7
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.9e-80 302.8 191 82.7
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 9.6e-80 300.4 191 81.2
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 1.6e-79 299.7 192 80.2
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 2.1e-79 299.3 191 80.6
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 2.8e-79 298.9 191 80.1
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.7e-79 298.5 191 80.1
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 4.8e-79 298.1 191 80.1
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 4.8e-79 298.1 191 80.6
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 4.8e-79 298.1 191 80.6
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.4e-78 296.6 178 83.7
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 1.8e-78 296.2 191 79.6
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.4e-78 295.8 191 79.6
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.4e-78 295.8 191 79.6
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 3.1e-78 295.4 177 84.7
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 3.1e-78 295.4 191 80.6
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 3.1e-78 295.4 195 79.5
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 4.0e-78 295.0 191 78.5
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 5.3e-78 294.7 191 79.6
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 5.3e-78 294.7 174 85.6
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 5.3e-78 294.7 187 80.7
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 9.0e-78 293.9 192 79.2
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 1.2e-77 293.5 191 79.1
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 2.6e-77 292.4 191 80.1
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 3.4e-77 292.0 174 83.9
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 5.8e-77 291.2 192 77.6
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 5.8e-77 291.2 191 78.0
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 7.6e-77 290.8 192 78.6
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 7.6e-77 290.8 191 77.5
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 7.6e-77 290.8 191 78.5
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 9.9e-77 290.4 192 77.6
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 1.3e-76 290.0 191 78.0
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 1.7e-76 289.7 192 79.2
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 3.8e-76 288.5 191 78.0
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 6.4e-76 287.7 185 81.1
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 8.4e-76 287.3 191 76.4
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 1.1e-75 287.0 192 76.0
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 1.4e-75 286.6 191 78.0
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 1.4e-75 286.6 173 82.7
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 1.4e-75 286.6 194 77.3
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 9.3e-75 283.9 187 77.5
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 9.3e-75 283.9 189 78.3
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 3.5e-74 282.0 185 76.2
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 3.5e-74 282.0 195 76.4
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 3.5e-74 282.0 184 79.3
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 4.6e-74 281.6 191 74.9
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.0e-74 281.2 212 71.7
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 6.0e-74 281.2 193 76.2
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 7.9e-74 280.8 191 77.5
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 5.1e-73 278.1 191 75.4
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 6.7e-73 277.7 177 78.0
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 6.7e-73 277.7 192 73.4
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 6.7e-73 277.7 191 74.9
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 1.1e-72 276.9 191 73.3
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 1.9e-72 276.2 191 73.8
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 7.4e-72 274.2 192 73.4
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 1.3e-71 273.5 183 74.9
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 2.1e-71 272.7 221 66.1
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 2.1e-71 272.7 183 74.3
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 2.1e-71 272.7 183 74.3
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 2.1e-71 272.7 183 74.3
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 2.1e-71 272.7 191 71.7
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 2.8e-71 272.3 192 74.0
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 2.8e-71 272.3 173 77.5
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 3.7e-71 271.9 174 78.2
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 4.8e-71 271.6 208 71.6
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 6.2e-71 271.2 175 78.3
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 8.2e-71 270.8 183 73.2
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 1.8e-70 269.6 190 72.1
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 3.1e-70 268.9 183 72.7
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.0e-70 268.5 183 76.0
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 4.0e-70 268.5 192 71.9
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 4.0e-70 268.5 171 76.6
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 1.2e-69 266.9 214 66.8
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 1.5e-69 266.5 176 75.0
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 4.5e-69 265.0 173 77.5
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 4.5e-69 265.0 191 70.7
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.9e-68 262.3 193 73.1
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 2.1e-66 256.1 184 70.7
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 4.6e-66 255.0 180 72.2
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 3.0e-65 252.3 304 50.7
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 8.7e-65 250.8 175 69.7
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 3.3e-64 248.8 161 80.1
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 6.9e-62 241.1 225 59.1
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 9.0e-62 240.7 140 85.0
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 2.5e-59 232.6 192 66.1
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 1.7e-52 209.9 124 82.3
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 1.1e-51 207.2 116 90.5
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 1.8e-49 199.9 121 79.3
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 2.6e-48 196.1 116 84.5
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 5.7e-48 194.9 134 76.1
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 2.8e-47 192.6 106 89.6
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 2.4e-46 189.5 120 78.3
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.5e-45 185.3 121 76.0
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 2.2e-44 183.0 136 66.9
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 1.4e-43 180.3 108 84.3
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 3.2e-43 179.1 102 85.3
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 3.0e-33 146.0 170 51.2
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 2.0e-32 143.3 152 47.4
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.8e-31 139.4 134 57.5
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 6.3e-31 138.3 150 51.3
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 2.1e-26 123.2 138 46.4
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 7.5e-24 114.8 200 41.5
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 1.3e-23 114.0 143 43.4
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 6.3e-23 111.7 228 34.6
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.1e-22 110.9 79 68.4
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 5.9e-21 105.1 121 49.6
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 2.5e-11 73.2 189 31.2
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 1.6e-10 70.5 55 70.9
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 3.6e-10 69.3 36 94.4
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 4.7e-10 68.9 78 44.9
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.8e-09 65.1 48 66.7
TAR371G0726 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.9e-06 57.0 33 81.8


User provided reference genes

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