Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 3.4e-153 545.0 289 100.0
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 3.7e-91 339.0 314 62.4
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 1.2e-86 323.9 310 61.0
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 2.9e-80 302.8 299 59.2
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 1.4e-77 293.9 303 57.4
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 3.1e-74 282.7 303 55.4
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 9.1e-74 281.2 292 54.1
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 1.2e-73 280.8 292 53.8
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 4.5e-73 278.9 319 52.4
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 2.2e-72 276.6 353 48.7
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 4.7e-70 268.9 337 48.7
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 8.8e-69 264.6 319 51.1
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 4.8e-67 258.8 313 50.5
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 6.3e-67 258.5 304 49.0
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 9.1e-66 254.6 306 49.7
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 1.2e-65 254.2 320 48.1
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 2.6e-65 253.1 304 49.0
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 2.6e-65 253.1 306 49.7
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 4.5e-65 252.3 304 48.4
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 7.7e-65 251.5 306 49.7
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 3.8e-64 249.2 310 48.4
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 6.5e-64 248.4 335 47.5
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 5.5e-63 245.4 293 49.5
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 7.2e-63 245.0 236 60.2
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 9.4e-63 244.6 334 46.1
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 9.4e-63 244.6 236 60.2
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 1.0e-61 241.1 280 49.3
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 4.0e-61 239.2 292 46.9
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 2.6e-60 236.5 311 46.6
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 7.5e-60 235.0 307 46.9
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 7.5e-60 235.0 287 48.4
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 9.7e-60 234.6 307 47.6
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 9.7e-60 234.6 305 48.5
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 2.8e-59 233.0 318 46.2
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 8.3e-59 231.5 235 55.7
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 8.3e-59 231.5 315 44.8
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 1.1e-58 231.1 304 48.0
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.4e-58 230.7 331 44.7
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 1.8e-58 230.3 292 46.2
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 4.1e-58 229.2 307 46.3
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 1.2e-57 227.6 306 46.1
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 2.0e-57 226.9 244 56.6
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 2.0e-57 226.9 290 47.6
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 1.3e-56 224.2 311 44.4
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.3e-56 224.2 297 43.4
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 2.2e-56 223.4 312 44.2
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 3.8e-56 222.6 295 46.4
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 5.0e-56 222.2 306 46.1
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 6.5e-56 221.9 315 43.2
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 1.1e-55 221.1 312 44.6
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.1e-55 221.1 318 44.0
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 7.2e-55 218.4 320 45.0
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.7e-54 216.5 303 45.2
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 4.7e-54 215.7 301 44.5
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.7e-54 215.7 317 43.5
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.8e-53 213.8 292 43.8
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.8e-53 213.8 303 43.9
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 2.3e-53 213.4 343 42.0
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.3e-53 213.4 292 43.8
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 3.0e-53 213.0 317 42.3
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 5.2e-53 212.2 302 45.4
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 6.8e-53 211.8 321 43.3
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 8.8e-53 211.5 282 44.7
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 1.2e-52 211.1 297 44.1
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 2.0e-52 210.3 307 43.0
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 2.6e-52 209.9 281 44.5
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 2.6e-52 209.9 312 44.9
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 4.4e-52 209.1 311 43.1
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 4.4e-52 209.1 315 42.9
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 4.4e-52 209.1 313 41.5
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 7.5e-52 208.4 319 44.2
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.7e-51 207.2 303 41.9
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 1.7e-51 207.2 309 42.7
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 2.8e-51 206.5 302 44.0
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 2.8e-51 206.5 317 41.3
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 3.7e-51 206.1 308 42.5
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 8.3e-51 204.9 301 43.2
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 8.3e-51 204.9 366 40.2
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 1.1e-50 204.5 319 40.8
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 1.1e-50 204.5 313 41.9
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.8e-50 203.8 279 44.1
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 5.4e-50 202.2 303 43.2
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 1.6e-49 200.7 235 46.8
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 1.6e-49 200.7 223 51.6
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.0e-49 200.3 267 45.7
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 2.7e-49 199.9 296 42.9
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 4.5e-49 199.1 300 40.7
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 5.9e-49 198.7 300 41.0
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 1.0e-48 198.0 303 41.9
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 1.0e-48 198.0 300 39.7
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 1.0e-48 198.0 249 48.2
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 1.3e-48 197.6 300 39.3
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.3e-48 197.6 279 43.7
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 1.7e-48 197.2 301 43.2
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 2.3e-48 196.8 289 42.6
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 5.0e-48 195.7 296 39.2
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 5.0e-48 195.7 254 44.1
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 6.6e-48 195.3 296 39.2
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 6.6e-48 195.3 303 40.3
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 1.1e-47 194.5 296 42.2
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 1.5e-47 194.1 318 39.9
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 2.5e-47 193.4 300 40.7
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.5e-47 193.4 314 41.4
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 2.5e-47 193.4 299 41.1
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 3.3e-47 193.0 288 40.6
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 3.3e-47 193.0 314 41.7
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 4.2e-47 192.6 296 41.6
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 5.5e-47 192.2 245 42.4
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 1.2e-46 191.0 297 41.4
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 3.6e-46 189.5 305 39.7
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 6.1e-46 188.7 296 39.9
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.4e-45 187.6 306 40.2
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.3e-45 186.8 266 40.2
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 3.4e-44 183.0 258 42.6
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 5.7e-44 182.2 297 38.4
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 1.3e-43 181.0 297 38.0
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 2.2e-43 180.3 220 45.0
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 9.2e-42 174.9 321 36.1
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.9e-40 169.9 297 36.4
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 1.1e-39 167.9 290 37.2
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 3.3e-39 166.4 319 37.9
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.0e-37 161.4 185 49.2
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 6.8e-37 158.7 195 49.2
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 2.0e-36 157.1 268 39.2
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 4.1e-34 149.4 225 44.0
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.1e-34 149.4 137 51.8
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 7.0e-34 148.7 250 38.4
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 1.3e-32 144.4 159 49.7
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 3.0e-32 143.3 279 36.9
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 6.6e-32 142.1 161 46.6
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.6e-30 137.5 289 32.9
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 1.7e-27 127.5 237 35.4
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.6e-25 120.9 296 31.1
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 2.1e-22 110.5 185 38.4
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 2.8e-22 110.2 94 54.3
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 8.9e-21 105.1 149 46.3
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 8.9e-21 105.1 191 31.4
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 1.1e-18 98.2 175 34.3
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 9.2e-18 95.1 152 33.6
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 1.6e-17 94.4 96 50.0
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 3.9e-16 89.7 241 27.4
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 6.6e-16 89.0 75 56.0
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 1.6e-14 84.3 218 33.5
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 3.6e-14 83.2 213 33.3
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 4.0e-13 79.7 135 34.1
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 4.0e-13 79.7 170 30.0
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 2.0e-12 77.4 159 32.7
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 2.0e-12 77.4 119 35.3
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 9.3e-10 68.6 111 34.2


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