Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 4.7e-196 687.6 321 100.0
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.0e-155 551.6 319 76.8
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 3.2e-152 542.0 319 74.0
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.2e-152 540.4 319 76.8
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 6.0e-151 537.7 319 76.5
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.0e-150 537.0 309 78.0
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 3.9e-150 535.0 319 74.0
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 5.6e-149 531.2 319 75.2
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 1.1e-147 526.9 319 73.0
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 1.8e-147 526.2 320 72.5
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.0e-147 525.0 319 73.0
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 1.2e-146 523.5 319 73.4
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.6e-146 522.3 318 74.2
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 3.4e-146 521.9 320 71.6
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 4.4e-146 521.5 320 72.5
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 7.6e-146 520.8 320 73.4
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 7.6e-146 520.8 319 72.4
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.3e-145 520.0 320 71.2
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 2.2e-145 519.2 318 72.0
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 2.2e-145 519.2 306 74.5
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 2.9e-145 518.8 319 72.1
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.9e-144 516.2 294 78.6
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 2.4e-144 515.8 319 71.8
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.2e-144 515.0 311 73.3
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 4.2e-144 515.0 319 71.5
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 5.4e-144 514.6 320 71.9
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 5.4e-144 514.6 320 71.9
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 1.2e-143 513.5 320 71.6
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 2.1e-143 512.7 320 71.9
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 2.7e-143 512.3 320 70.3
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 3.5e-143 511.9 311 73.6
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 4.6e-143 511.5 317 70.3
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.0e-142 510.4 328 69.5
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 1.7e-142 509.6 317 70.0
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 1.7e-142 509.6 320 70.9
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.7e-142 509.6 319 71.2
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 2.3e-142 509.2 316 70.9
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 3.0e-142 508.8 310 72.3
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.9e-142 508.4 328 69.5
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 1.9e-141 506.1 310 71.0
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 2.5e-141 505.8 320 69.7
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 2.5e-141 505.8 320 69.4
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 3.3e-141 505.4 308 70.5
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 5.6e-141 504.6 320 70.0
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 5.6e-141 504.6 319 70.2
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.2e-140 503.4 320 69.4
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 1.2e-140 503.4 306 70.9
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 2.1e-140 502.7 320 70.0
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 2.1e-140 502.7 320 69.1
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 4.7e-140 501.5 311 71.4
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 6.2e-140 501.1 310 71.3
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 8.1e-140 500.7 317 70.3
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 8.1e-140 500.7 314 70.4
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 8.1e-140 500.7 320 68.1
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.1e-139 500.4 313 70.3
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 2.4e-139 499.2 310 71.9
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 3.1e-139 498.8 321 69.2
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 3.1e-139 498.8 320 70.3
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 5.3e-139 498.0 320 69.4
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 6.9e-139 497.7 311 70.4
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 6.9e-139 497.7 311 70.4
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 6.9e-139 497.7 315 68.9
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 9.0e-139 497.3 311 70.1
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.4e-138 495.4 323 69.0
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 4.4e-138 495.0 311 70.1
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 4.4e-138 495.0 322 68.9
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 5.8e-138 494.6 308 70.5
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 7.6e-138 494.2 319 68.3
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 7.6e-138 494.2 310 68.4
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 9.9e-138 493.8 310 71.6
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 1.3e-137 493.4 320 67.5
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.3e-137 493.4 306 69.6
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.7e-137 493.0 315 69.5
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 2.2e-137 492.7 320 68.1
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.9e-137 492.3 320 69.4
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 3.8e-137 491.9 315 68.9
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 4.9e-137 491.5 317 67.5
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 4.9e-137 491.5 320 67.8
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 4.9e-137 491.5 307 70.4
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 4.9e-137 491.5 315 68.9
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 1.4e-136 490.0 310 70.6
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 1.4e-136 490.0 307 71.0
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 1.4e-136 490.0 315 68.6
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.9e-136 489.6 322 68.3
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 4.2e-136 488.4 318 67.9
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 7.1e-136 487.6 314 68.8
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 1.6e-135 486.5 278 77.7
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 2.1e-135 486.1 306 68.6
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 3.5e-135 485.3 320 68.8
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 6.0e-135 484.6 314 67.5
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 7.8e-135 484.2 311 69.1
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 7.8e-135 484.2 307 68.1
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 1.0e-134 483.8 311 68.8
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.3e-134 483.4 310 70.0
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 1.3e-134 483.4 306 68.6
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 1.7e-134 483.0 304 69.7
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 2.3e-134 482.6 316 68.0
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 6.6e-134 481.1 307 69.1
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 1.9e-133 479.6 317 65.9
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 4.3e-133 478.4 317 67.8
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 1.6e-132 476.5 301 68.8
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 6.2e-132 474.6 304 68.1
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 8.1e-132 474.2 303 68.3
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 2.0e-130 469.5 306 67.6
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 7.6e-130 467.6 306 67.6
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 1.3e-129 466.8 303 67.3
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 1.7e-129 466.5 306 67.6
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 2.2e-129 466.1 303 66.7
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.8e-129 465.3 317 63.4
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 4.9e-129 464.9 306 67.0
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 8.4e-129 464.2 307 66.4
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 3.2e-128 462.2 303 65.7
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 3.2e-128 462.2 306 65.0
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.2e-128 462.2 290 70.7
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 7.1e-128 461.1 306 66.3
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 7.1e-128 461.1 311 66.2
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 1.6e-127 459.9 320 63.8
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.5e-127 458.8 290 70.0
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 6.0e-127 458.0 303 66.0
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 6.0e-127 458.0 303 65.7
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 7.9e-127 457.6 318 66.0
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 1.3e-126 456.8 303 65.7
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.1e-126 454.9 287 71.1
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 4.8e-124 448.4 306 65.7
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 3.8e-121 438.7 319 63.0
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 5.5e-120 434.9 306 63.7
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 9.3e-120 434.1 323 60.7
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 3.0e-118 429.1 272 68.0
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 9.6e-117 424.1 309 61.5
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 8.2e-116 421.0 307 61.2
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 5.8e-114 414.8 314 58.0
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 6.0e-111 404.8 310 57.4
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.0e-110 404.1 310 62.3
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.3e-110 403.7 295 64.1
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 5.7e-109 398.3 308 58.1
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.1e-107 394.0 323 59.8
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.1e-107 394.0 323 59.8
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 8.5e-105 384.4 305 56.7
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.9e-96 356.7 216 70.8
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.4e-94 350.5 225 66.7
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 1.5e-93 347.1 307 52.4
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 7.7e-90 334.7 311 52.1
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.6e-82 310.5 271 55.4
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 5.5e-80 302.0 314 49.7
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 6.5e-73 278.5 263 53.6
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 1.2e-71 274.2 183 68.3
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 6.0e-50 202.2 126 67.5
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 2.8e-47 193.4 133 64.7
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.9e-44 183.3 119 70.6
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 2.8e-39 166.8 302 31.8
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 1.7e-36 157.5 301 31.6
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 6.8e-30 135.6 236 36.0
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 2.0e-29 134.0 338 28.1
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.1e-27 128.3 96 60.4
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.8e-14 84.3 50 76.0
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 7.6e-13 79.0 74 55.4


User provided reference genes

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