Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27826 Striga asiatica HOM05D000434 ORTHO05D007220 9.1e-150 533.5 260 100.0
SalBow5G3182 Salvia bowleyana HOM05D000434 ORTHO05D007220 1.3e-90 337.0 229 75.5
SalBow5G4295 Salvia bowleyana HOM05D000434 ORTHO05D007220 1.3e-90 337.0 229 75.5
Migut.O00172 Erythranthe guttata HOM05D000434 ORTHO05D007220 2.1e-82 309.7 192 82.3
Oeu019426.1 Olea europaea HOM05D000434 ORTHO05D007220 1.2e-80 303.9 192 80.7
Lj5A131T30 Lonicera japonica HOM05D000434 ORTHO05D007220 6.5e-79 298.1 197 77.2
Solyc03g112060.3 Solanum lycopersicum HOM05D000434 ORTHO05D007220 7.9e-77 291.2 196 75.5
PGSC0003DMG400018194 Solanum tuberosum HOM05D000434 ORTHO05D007220 1.0e-76 290.8 192 75.5
Peaxi162Scf00089g01235 Petunia axillaris HOM05D000434 ORTHO05D007220 6.7e-76 288.1 193 76.2
Sopen03g031160 Solanum pennellii HOM05D000434 ORTHO05D007220 8.7e-76 287.7 196 74.5
Nitab4.5_0002522g0070 Nicotiana tabacum HOM05D000434 ORTHO05D007220 1.1e-75 287.3 192 75.5
Cc04_g11340 Coffea canephora HOM05D000434 ORTHO05D007220 1.9e-75 286.6 196 75.0
Haze_07599 Corylus avellana HOM05D000434 ORTHO05D007220 2.5e-75 286.2 192 76.6
CAN.G126.48 Capsicum annuum HOM05D000434 ORTHO05D007220 3.3e-75 285.8 192 74.5
Cfa019232 Carpinus fangiana HOM05D000434 ORTHO05D007220 5.7e-75 285.0 192 76.0
TAR629G3010 Trochodendron aralioides HOM05D000434 ORTHO05D007220 2.1e-74 283.1 197 73.6
Dinv20591 Davidia involucrata HOM05D000434 ORTHO05D007220 2.8e-74 282.7 197 74.1
Eucgr.K02783 Eucalyptus grandis HOM05D000434 ORTHO05D007220 2.8e-74 282.7 197 73.6
Lsat_1_v5_gn_4_79240 Lactuca sativa HOM05D000434 ORTHO05D007220 3.7e-74 282.3 193 75.6
Nitab4.5_0008037g0020 Nicotiana tabacum HOM05D000434 ORTHO05D007220 3.7e-74 282.3 192 74.0
TAR371G0697 Trochodendron aralioides HOM05D000434 ORTHO05D007220 3.7e-74 282.3 201 74.1
HanXRQChr16g0504771 Helianthus annuus HOM05D000434 ORTHO05D007220 4.8e-74 282.0 192 76.0
Dinv38518 Davidia involucrata HOM05D000434 ORTHO05D007220 8.2e-74 281.2 197 73.6
GSVIVG01007621001 Vitis vinifera HOM05D000434 ORTHO05D007220 8.2e-74 281.2 197 74.1
Gohir.A07G056000 Gossypium hirsutum HOM05D000434 ORTHO05D007220 1.4e-73 280.4 197 72.6
vmacro16649 Vaccinium macrocarpon HOM05D000434 ORTHO05D007220 1.4e-73 280.4 197 73.1
COL.COLO4_20642 Corchorus olitorius HOM05D000434 ORTHO05D007220 1.8e-73 280.0 197 73.6
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 2.4e-73 279.6 197 74.1
QL10p006642 Quercus lobata HOM05D000434 ORTHO05D007220 6.9e-73 278.1 192 71.9
Gohir.D07G060300 Gossypium hirsutum HOM05D000434 ORTHO05D007220 9.0e-73 277.7 197 72.1
Gorai.001G064000 Gossypium raimondii HOM05D000434 ORTHO05D007220 9.0e-73 277.7 197 72.1
CiPaw.11G018700 Carya illinoinensis HOM05D000434 ORTHO05D007220 1.2e-72 277.3 192 71.9
Lj4g0018547 Lotus japonicus HOM05D000434 ORTHO05D007220 1.5e-72 276.9 192 71.9
Prupe.5G164300 Prunus persica HOM05D000434 ORTHO05D007220 1.5e-72 276.9 197 73.6
unitig_8.g3068 Utricularia gibba HOM05D000434 ORTHO05D007220 2.6e-72 276.2 191 72.8
FAN04G2744 Fragaria x ananassa HOM05D000434 ORTHO05D007220 3.4e-72 275.8 198 72.2
Thecc.03G116400 Theobroma cacao HOM05D000434 ORTHO05D007220 5.9e-72 275.0 197 72.1
MD06G1164800 Malus domestica HOM05D000434 ORTHO05D007220 1.0e-71 274.2 196 73.0
Nn3g16677 Nelumbo nucifera HOM05D000434 ORTHO05D007220 1.0e-71 274.2 195 70.8
Hund05601 Selenicereus undatus HOM05D000434 ORTHO05D007220 1.3e-71 273.9 196 70.4
RcHm_v2.0_Chr7g0192351 Rosa chinensis HOM05D000434 ORTHO05D007220 1.7e-71 273.5 198 71.2
Cpa.g.sc159.10 Carica papaya HOM05D000434 ORTHO05D007220 2.2e-71 273.1 194 72.2
arahy.Tifrunner.gnm1.ann1.NJ3BP6 Arachis hypogaea HOM05D000434 ORTHO05D007220 2.9e-71 272.7 197 70.6
Ca_19423_v3 Cicer arietinum L. HOM05D000434 ORTHO05D007220 2.9e-71 272.7 193 72.0
FAN08G1614 Fragaria x ananassa HOM05D000434 ORTHO05D007220 2.9e-71 272.7 198 71.7
arahy.Tifrunner.gnm1.ann1.T2T4K7 Arachis hypogaea HOM05D000434 ORTHO05D007220 3.8e-71 272.3 197 71.1
Ciclev10019026m.g Citrus clementina HOM05D000434 ORTHO05D007220 3.8e-71 272.3 197 73.1
Sc04g0001370 Simmondsia chinensis HOM05D000434 ORTHO05D007220 3.8e-71 272.3 194 70.1
FAN18G4510 Fragaria x ananassa HOM05D000434 ORTHO05D007220 5.0e-71 271.9 198 71.2
MELO3C002307.2 Cucumis melo HOM05D000434 ORTHO05D007220 6.5e-71 271.6 195 67.2
CsaV3_1G008930 Cucumis sativus L. HOM05D000434 ORTHO05D007220 6.5e-71 271.6 195 67.2
ClCG03G003080 Citrullus lanatus HOM05D000434 ORTHO05D007220 8.5e-71 271.2 195 68.7
Manes.06G111600 Manihot esculenta HOM05D000434 ORTHO05D007220 8.5e-71 271.2 197 70.6
Manes.14G059700 Manihot esculenta HOM05D000434 ORTHO05D007220 1.1e-70 270.8 197 70.6
Medtr4g104680 Medicago truncatula HOM05D000434 ORTHO05D007220 1.1e-70 270.8 193 71.5
Potri.015G085300 Populus trichocarpa HOM05D000434 ORTHO05D007220 1.1e-70 270.8 197 71.6
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 1.9e-70 270.0 196 70.4
Duzib205G0335 Durio zibethinus HOM05D000434 ORTHO05D007220 2.5e-70 269.6 197 70.6
FvH4_5g06430 Fragaria vesca HOM05D000434 ORTHO05D007220 2.5e-70 269.6 198 70.7
Glyma.17G125100 Glycine max HOM05D000434 ORTHO05D007220 2.5e-70 269.6 197 70.1
MD14G1170100 Malus domestica HOM05D000434 ORTHO05D007220 2.5e-70 269.6 196 72.4
Rhsim12G0168600 Rhododendron simsii HOM05D000434 ORTHO05D007220 2.5e-70 269.6 192 72.4
TWI23G1317 Tripterygium wilfordii HOM05D000434 ORTHO05D007220 3.2e-70 269.2 197 69.0
AUR62001201 Chenopodium quinoa HOM05D000434 ORTHO05D007220 4.2e-70 268.9 196 69.9
THA.LOC104824992 Tarenaya hassleriana HOM05D000434 ORTHO05D007220 5.5e-70 268.5 197 70.1
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 5.5e-70 268.5 192 71.4
Atru.chr9.2596 Acer truncatum HOM05D000434 ORTHO05D007220 1.6e-69 266.9 197 71.6
CSS0021677 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D007220 1.6e-69 266.9 197 72.1
FAN13G1139 Fragaria x ananassa HOM05D000434 ORTHO05D007220 1.6e-69 266.9 198 70.7
CANSAT80G0711 Cannabis sativa HOM05D000434 ORTHO05D007220 2.1e-69 266.5 197 71.1
Sabra15G0108200 Salix brachista HOM05D000434 ORTHO05D007220 2.1e-69 266.5 197 70.6
Glyma.05G042400 Glycine max HOM05D000434 ORTHO05D007220 2.7e-69 266.2 197 70.1
Phvul.003G202900 Phaseolus vulgaris HOM05D000434 ORTHO05D007220 2.7e-69 266.2 197 69.5
EL10Ac7g17990 Beta vulgaris HOM05D000434 ORTHO05D007220 4.6e-69 265.4 196 67.9
Lalb_Chr07g0183031 Lupinus albus HOM05D000434 ORTHO05D007220 1.0e-68 264.2 197 67.5
Aqoxy5G03714 Aquilegia oxysepala HOM05D000434 ORTHO05D007220 1.8e-68 263.5 197 70.1
Sed0007484 Sechium edule HOM05D000434 ORTHO05D007220 1.8e-68 263.5 197 67.5
PGR044G1593 Punica granatum HOM05D000434 ORTHO05D007220 3.0e-68 262.7 198 68.7
Psat5g209640 Pisum sativum HOM05D000434 ORTHO05D007220 3.9e-68 262.3 191 69.1
VMungo1215G0744 Vigna mungo HOM05D000434 ORTHO05D007220 3.9e-68 262.3 197 68.5
TWI39G0950 Tripterygium wilfordii HOM05D000434 ORTHO05D007220 5.1e-68 261.9 197 68.0
AUR62022128 Chenopodium quinoa HOM05D000434 ORTHO05D007220 6.7e-68 261.5 196 68.9
PSO063G6548 Papaver somniferum HOM05D000434 ORTHO05D007220 1.9e-67 260.0 196 66.3
PSO754G0033 Papaver somniferum HOM05D000434 ORTHO05D007220 4.3e-67 258.8 196 65.8
AT5G50210 Arabidopsis thaliana HOM05D000434 ORTHO05D007220 1.3e-66 257.3 192 67.2
Os12g0290150 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D007220 1.3e-66 257.3 195 66.2
CDE09G1335 Ceratophyllum demersum HOM05D000434 ORTHO05D007220 2.2e-66 256.5 195 66.2
AL8G24240 Arabidopsis lyrata HOM05D000434 ORTHO05D007220 4.8e-66 255.4 192 66.7
Thhalv10012812m.g Eutrema salsugineum HOM05D000434 ORTHO05D007220 6.3e-66 255.0 192 65.6
Psat4g061760 Pisum sativum HOM05D000434 ORTHO05D007220 8.2e-66 254.6 194 68.0
BcaC04g20813 Brassica carinata HOM05D000434 ORTHO05D007220 1.4e-65 253.8 195 66.2
C09p38860 Brassica napus HOM05D000434 ORTHO05D007220 1.4e-65 253.8 195 66.2
BolC9t56752H Brassica oleracea HOM05D000434 ORTHO05D007220 1.4e-65 253.8 195 66.2
Carub.0008s1022 Capsella rubella HOM05D000434 ORTHO05D007220 1.4e-65 253.8 192 65.6
A10p08480 Brassica napus HOM05D000434 ORTHO05D007220 2.4e-65 253.1 195 65.6
BraSC37t46157Z Brassica rapa HOM05D000434 ORTHO05D007220 2.4e-65 253.1 195 65.6
HPP92_006247 Vanilla planifolia HOM05D000434 ORTHO05D007220 2.4e-65 253.1 196 64.8
BcaB08g35393 Brassica carinata HOM05D000434 ORTHO05D007220 3.1e-65 252.7 195 66.7
Sp6g12320 Schrenkiella parvula HOM05D000434 ORTHO05D007220 4.1e-65 252.3 195 65.6
CARHR258410 Cardamine hirsuta HOM05D000434 ORTHO05D007220 5.3e-65 251.9 192 65.6
Aa31sc402G20 Aethionema arabicum HOM05D000434 ORTHO05D007220 1.7e-63 246.9 195 67.7
ATR0122G015 Amborella trichopoda HOM05D000434 ORTHO05D007220 5.0e-63 245.4 194 62.9
SEGI_39802 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 1.4e-62 243.8 194 64.9
Pp3c19_15510 Physcomitrium patens HOM05D000434 ORTHO05D007220 5.9e-56 221.9 192 61.5
SEGI_28653 Sequoiadendron giganteum HOM05D000434 ORTHO05D007220 7.9e-53 211.5 179 62.6
Pp3c22_13970 Physcomitrium patens HOM05D000434 ORTHO05D007220 3.0e-52 209.5 192 57.3
SMO367G0357 Selaginella moellendorffii HOM05D000434 ORTHO05D007220 8.8e-52 208.0 192 57.3
AagrBONN_evm.TU.Sc2ySwM_368.2356 Anthoceros agrestis HOM05D000434 ORTHO05D007220 1.8e-49 200.3 175 62.3
CBR_g20372 Chara braunii HOM05D000434 ORTHO05D007220 2.5e-46 189.9 220 51.4
CBR_g50939 Chara braunii HOM05D000434 ORTHO05D007220 1.0e-44 184.5 218 50.5
Cre06.g251450 Chlamydomonas reinhardtii HOM05D000434 ORTHO05D007220 5.7e-43 178.7 197 50.8
Mapoly0102s0006 Marchantia polymorpha HOM05D000434 ORTHO05D007220 2.2e-42 176.8 193 50.3
MCO05G483 Micromonas commoda HOM05D000434 ORTHO05D007220 1.0e-39 167.9 196 50.0
Actinidia08038 Actinidia chinensis HOM05D000434 ORTHO05D007220 2.9e-39 166.4 113 77.9
Psat0s171g0040 Pisum sativum HOM05D000434 ORTHO05D007220 5.0e-39 165.6 136 65.4
Psat0s2371g0040 Pisum sativum HOM05D000434 ORTHO05D006824 5.0e-39 165.6 136 65.4
PRCOL_00006555 Prasinoderma coloniale HOM05D000434 ORTHO05D007220 7.5e-35 151.8 172 51.7
Psat5g252720 Pisum sativum HOM05D000434 ORTHO05D007220 4.1e-33 146.0 90 80.0
Phvul.010G094450 Phaseolus vulgaris HOM05D000434 ORTHO05D007220 1.6e-29 134.0 130 54.6
Nn4g22565 Nelumbo nucifera HOM05D000434 ORTHO05D007220 3.4e-27 126.3 133 53.4
SGA_v2.0_scaffold106G30573 Striga asiatica HOM05D000434 ORTHO05D007220 6.6e-23 112.1 63 85.7
Psat6g059000 Pisum sativum HOM05D002708 ORTHO05D003516 5.4e-17 92.4 94 53.2
Actinidia08037 Actinidia chinensis HOM05D000434 ORTHO05D007220 9.8e-11 71.6 46 73.9
ECA232G0018 Erigeron canadensis HOM05D000434 ORTHO05D007220 7.0e-09 65.5 31 93.5


User provided reference genes

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