Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27816 Striga asiatica HOM05D013340 ORTHO05D013369 2.4e-173 612.1 308 100.0
SGA_v2.0_scaffold37G14932 Striga asiatica HOM05D013340 ORTHO05D013369 2.4e-16 90.5 161 41.6
SGA_v2.0_scaffold219G42552 Striga asiatica HOM05D013340 ORTHO05D013369 2.3e-14 84.0 178 38.8
RcHm_v2.0_Chr7g0200261 Rosa chinensis HOM05D013340 ORTHO05D013369 7.3e-13 79.0 117 44.4
Os06g0642400 Oryza sativa ssp. japonica HOM05D013340 ORTHO05D013369 1.5e-10 71.2 114 43.0
Zm00001eb245970 Zea mays HOM05D029904 ORTHO05D013369 4.4e-10 69.7 178 36.0
Os10g0514550 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D016550 5.8e-10 69.3 186 36.6
SGA_v2.0_scaffold34G13612 Striga asiatica HOM05D020718 ORTHO05D013369 1.3e-09 68.2 149 37.6
MBI16_g21173_MAGBIO Magnolia biondii HOM05D000149 ORTHO05D000076 1.7e-09 67.8 103 43.7
Os01g0543800 Oryza sativa ssp. japonica HOM05D013340 ORTHO05D013369 1.4e-08 64.7 88 48.9
Atru.chr9.2625 Acer truncatum HOM05D013340 ORTHO05D013369 1.2e-07 61.6 64 56.2
Phvul.003G005600 Phaseolus vulgaris HOM05D013340 ORTHO05D013369 1.2e-07 61.6 91 41.8
SGA_v2.0_scaffold144G35987 Striga asiatica HOM05D020718 ORTHO05D399311 3.5e-07 60.1 168 34.5
SGA_v2.0_scaffold118G32580 Striga asiatica HOM05D020718 ORTHO05D013369 1.3e-06 58.2 97 41.2
Os01g0350100 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D016550 6.6e-06 55.8 152 36.2
Os09g0264675 Oryza sativa ssp. japonica HOM05D020718 ORTHO05D013369 6.6e-06 55.8 92 43.5


User provided reference genes

Program Settings