Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27796 Striga asiatica HOM05D040414 ORTHO05D399210 2.2e-89 332.4 184 100.0
SGA_v2.0_scaffold90G27799 Striga asiatica HOM05D040414 ORTHO05D403595 3.7e-28 129.0 76 78.9
SGA_v2.0_scaffold90G27801 Striga asiatica HOM05D000069 ORTHO05D399115 9.7e-21 104.4 61 83.6
SGA_v2.0_scaffold4G01865 Striga asiatica HOM05D000919 ORTHO05D001187 5.5e-08 62.0 74 40.5
EL10Ac8g20214 Beta vulgaris HOM05D000519 ORTHO05D000959 1.6e-07 60.5 82 40.2
SGA_v2.0_scaffold402G50986 Striga asiatica HOM05D000085 ORTHO05D000274 2.1e-07 60.1 85 48.2
SGA_v2.0_scaffold90G27797 Striga asiatica HOM05D000069 ORTHO05D000060 2.7e-07 59.7 80 38.8
Sc24g0000290 Simmondsia chinensis HOM05D000519 ORTHO05D000959 4.7e-07 58.9 60 50.0
Ah.09g234140 Amaranthus hybridus HOM05D000519 ORTHO05D000959 6.1e-07 58.5 74 40.5
AUR62021845 Chenopodium quinoa HOM05D000519 ORTHO05D000959 6.1e-07 58.5 74 39.2
Sc17g0007820 Simmondsia chinensis HOM05D000519 ORTHO05D000959 8.0e-07 58.2 59 47.5
Aa31LG2G12570 Aethionema arabicum HOM05D000519 ORTHO05D019510 1.4e-06 57.4 71 39.4
Oeu047064.1 Olea europaea HOM05D000519 ORTHO05D000959 1.4e-06 57.4 58 48.3
Ah.08g216340 Amaranthus hybridus HOM05D000519 ORTHO05D000959 1.8e-06 57.0 84 34.5
AUR62012808 Chenopodium quinoa HOM05D000519 ORTHO05D000959 1.8e-06 57.0 67 41.8
Sp7g15050 Schrenkiella parvula HOM05D000519 ORTHO05D000959 3.0e-06 56.2 55 43.6
Aa31LG2G12610 Aethionema arabicum HOM05D000519 ORTHO05D000959 4.0e-06 55.8 54 44.4
CSS0008277 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 4.0e-06 55.8 63 44.4
CSS0041609 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 4.0e-06 55.8 63 44.4
BcaC07g37991 Brassica carinata HOM05D000519 ORTHO05D000959 6.7e-06 55.1 52 44.2
BolC8t48374H Brassica oleracea HOM05D000519 ORTHO05D000959 6.7e-06 55.1 52 44.2
Oeu009405.1 Olea europaea HOM05D000519 ORTHO05D000959 6.7e-06 55.1 58 44.8
Thecc.06G234700 Theobroma cacao HOM05D000519 ORTHO05D000959 6.7e-06 55.1 77 33.8
RcHm_v2.0_Chr5g0001051 Rosa chinensis HOM05D000519 ORTHO05D000959 8.8e-06 54.7 55 45.5


User provided reference genes

Program Settings