Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27781 Striga asiatica HOM05D007187 ORTHO05D009219 1.4e-186 656.4 382 100.0
Migut.O00232 Erythranthe guttata HOM05D007187 ORTHO05D009219 2.2e-115 419.9 372 64.0
MSTRG.11527 Avicennia marina HOM05D007187 ORTHO05D009219 8.2e-115 417.9 365 66.0
SalBow5G2942 Salvia bowleyana HOM05D007187 ORTHO05D009219 5.3e-106 388.7 336 64.9
Ciclev10020853m.g Citrus clementina HOM05D007187 ORTHO05D009219 1.7e-96 357.1 299 64.9
GSVIVG01000394001 Vitis vinifera HOM05D007187 ORTHO05D009219 8.5e-96 354.8 323 61.6
CAN.G637.26 Capsicum annuum HOM05D007187 ORTHO05D009219 2.5e-95 353.2 316 61.4
Hma1.2p1_0471F.1_g159290 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 6.1e-94 348.6 298 62.1
Actinidia34651 Actinidia chinensis HOM05D007187 ORTHO05D009219 8.0e-94 348.2 300 63.0
Nn4g24583 Nelumbo nucifera HOM05D007187 ORTHO05D009219 2.0e-92 343.6 315 61.6
MD06G1234700 Malus domestica HOM05D007187 ORTHO05D009219 4.4e-92 342.4 302 60.6
Prupe.5G239500 Prunus persica HOM05D007187 ORTHO05D009219 9.8e-92 341.3 296 62.8
RcHm_v2.0_Chr7g0177701 Rosa chinensis HOM05D007187 ORTHO05D009219 9.8e-92 341.3 333 56.8
Cfa020663 Carpinus fangiana HOM05D007187 ORTHO05D009219 2.2e-91 340.1 299 64.2
Solyc03g098110.4 Solanum lycopersicum HOM05D007187 ORTHO05D009219 6.3e-91 338.6 374 53.5
Sopen03g028810 Solanum pennellii HOM05D007187 ORTHO05D009219 8.3e-91 338.2 374 53.5
Peaxi162Scf00171g00732 Petunia axillaris HOM05D007187 ORTHO05D009219 1.8e-90 337.0 317 58.7
Atru.chr9.1590 Acer truncatum HOM05D007187 ORTHO05D009219 7.0e-90 335.1 294 62.2
TAR629G1287 Trochodendron aralioides HOM05D007187 ORTHO05D009219 7.0e-90 335.1 311 61.1
QL10p033296 Quercus lobata HOM05D007187 ORTHO05D009219 1.2e-89 334.3 300 61.7
QL93p0156_0017 Quercus lobata HOM05D007187 ORTHO05D009219 1.2e-89 334.3 300 61.7
PGSC0003DMG400031050 Solanum tuberosum HOM05D007187 ORTHO05D009219 3.5e-89 332.8 346 54.6
Gohir.A07G061100 Gossypium hirsutum HOM05D007187 ORTHO05D009219 5.9e-89 332.0 311 59.2
Gohir.D07G065800 Gossypium hirsutum HOM05D007187 ORTHO05D009219 1.0e-88 331.3 311 59.2
Gorai.001G069400 Gossypium raimondii HOM05D007187 ORTHO05D009219 1.0e-88 331.3 311 59.2
HanXRQChr01g0002671 Helianthus annuus HOM05D007187 ORTHO05D009219 2.3e-88 330.1 363 53.2
Lj5C164T17 Lonicera japonica HOM05D007187 ORTHO05D009219 2.3e-88 330.1 312 59.6
Thecc.03G067300 Theobroma cacao HOM05D007187 ORTHO05D009219 2.3e-88 330.1 309 57.6
Nitab4.5_0000936g0080 Nicotiana tabacum HOM05D007187 ORTHO05D009219 5.0e-88 328.9 370 52.7
FAN13G0144 Fragaria x ananassa HOM05D007187 ORTHO05D009219 6.6e-88 328.6 333 56.2
Manes.14G173900 Manihot esculenta HOM05D007187 ORTHO05D009219 6.6e-88 328.6 342 55.8
PGR083G1346 Punica granatum HOM05D007187 ORTHO05D009219 8.6e-88 328.2 309 60.5
Eucgr.H00587 Eucalyptus grandis HOM05D007187 ORTHO05D009219 2.8e-86 323.2 301 59.1
ClCG04G010390 Citrullus lanatus HOM05D007187 ORTHO05D009219 3.6e-86 322.8 294 61.2
ECA238G2937 Erigeron canadensis HOM05D007187 ORTHO05D009219 3.6e-86 322.8 304 57.9
Lsat_1_v5_gn_2_15080 Lactuca sativa HOM05D007187 ORTHO05D009219 3.6e-86 322.8 317 57.1
Nitab4.5_0004454g0040 Nicotiana tabacum HOM05D007187 ORTHO05D009219 6.1e-86 322.0 364 52.5
MD14G1241900 Malus domestica HOM05D007187 ORTHO05D009219 1.0e-85 321.2 296 60.1
PSO782G3824 Papaver somniferum HOM05D007187 ORTHO05D009219 1.0e-85 321.2 290 61.7
ATR0598G346 Amborella trichopoda HOM05D007187 ORTHO05D009219 1.4e-85 320.9 340 54.4
PSO063G6433 Papaver somniferum HOM05D007187 ORTHO05D009219 1.8e-85 320.5 333 57.4
AT1G73470 Arabidopsis thaliana HOM05D007187 ORTHO05D009219 5.2e-85 318.9 305 57.4
Carub.0002s2020 Capsella rubella HOM05D007187 ORTHO05D009219 5.2e-85 318.9 339 54.9
Rhsim08G0113600 Rhododendron simsii HOM05D007187 ORTHO05D009219 5.2e-85 318.9 363 52.3
MELO3C002156.2 Cucumis melo HOM05D007187 ORTHO05D009219 8.9e-85 318.2 290 61.0
DCAR_014735 Daucus carota HOM05D007187 ORTHO05D009219 1.2e-84 317.8 295 58.6
Sed0020940 Sechium edule HOM05D007187 ORTHO05D009219 1.5e-84 317.4 294 60.2
Sabra15G0027300 Salix brachista HOM05D007187 ORTHO05D009219 7.5e-84 315.1 312 57.7
Thhalv10018766m.g Eutrema salsugineum HOM05D007187 ORTHO05D009219 1.3e-83 314.3 290 59.3
AL2G33240 Arabidopsis lyrata HOM05D007187 ORTHO05D009219 1.7e-83 313.9 305 56.7
Aqoxy3G04047 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 2.2e-83 313.5 353 52.4
Aa31LG4G3710 Aethionema arabicum HOM05D007187 ORTHO05D009219 3.7e-83 312.8 342 52.3
TWI15G0155 Tripterygium wilfordii HOM05D007187 ORTHO05D009219 8.3e-83 311.6 344 53.2
A02p18740 Brassica napus HOM05D007187 ORTHO05D009219 1.1e-82 311.2 292 58.9
C02p31110 Brassica napus HOM05D007187 ORTHO05D009219 1.1e-82 311.2 291 59.5
CsaV3_1G007400 Cucumis sativus L. HOM05D007187 ORTHO05D009219 1.1e-82 311.2 293 59.7
Sp5g28650 Schrenkiella parvula HOM05D007187 ORTHO05D009219 1.8e-82 310.5 297 57.2
Cc04_g09730 Coffea canephora HOM05D007187 ORTHO05D009219 2.0e-81 307.0 363 49.6
arahy.Tifrunner.gnm1.ann1.ZBK6XN Arachis hypogaea HOM05D007187 ORTHO05D009219 1.7e-80 303.9 301 56.5
BolC2t09155H Brassica oleracea HOM05D007187 ORTHO05D009219 2.3e-80 303.5 296 58.1
arahy.Tifrunner.gnm1.ann1.RE1P9T Arachis hypogaea HOM05D007187 ORTHO05D009219 1.9e-79 300.4 301 56.5
Dinv19316 Davidia involucrata HOM05D007187 ORTHO05D009219 1.9e-79 300.4 322 55.6
Nitab4.5_0000021g0400 Nicotiana tabacum HOM05D007187 ORTHO05D009219 6.8e-77 292.0 285 58.2
HPP92_026739 Vanilla planifolia HOM05D007187 ORTHO05D009219 1.2e-76 291.2 333 52.6
HPP92_016177 Vanilla planifolia HOM05D007187 ORTHO05D009219 2.0e-76 290.4 333 52.3
LjContig00484g0006565 Lotus japonicus HOM05D007187 ORTHO05D009219 6.4e-75 285.4 304 53.6
VMungo0251G3256 Vigna mungo HOM05D007187 ORTHO05D009219 6.4e-75 285.4 297 55.2
BraA02t06916Z Brassica rapa HOM05D007187 ORTHO05D009219 1.4e-74 284.3 297 55.6
FvH4_5g17910 Fragaria vesca HOM05D007187 ORTHO05D009219 2.0e-73 280.4 298 53.7
Phvul.002G332600 Phaseolus vulgaris HOM05D007187 ORTHO05D009219 2.0e-73 280.4 297 54.5
TPR.G1397 Trifolium pratense HOM05D007187 ORTHO05D009219 2.5e-71 273.5 315 51.1
CiPaw.15G149500 Carya illinoinensis HOM05D007187 ORTHO05D009219 8.3e-67 258.5 257 58.4
Hma1.2p1_0471F.1_g159280 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 1.9e-66 257.3 235 60.0
AagrBONN_evm.TU.Sc2ySwM_228.159 Anthoceros agrestis HOM05D007187 ORTHO05D009219 2.3e-61 240.4 389 41.1
EL10Ac8g19490 Beta vulgaris HOM05D007187 ORTHO05D009219 4.9e-59 232.6 294 50.0
Pp3c24_15180 Physcomitrium patens HOM05D007187 ORTHO05D009219 1.9e-58 230.7 295 46.1
Hund22370 Selenicereus undatus HOM05D007187 ORTHO05D009219 4.1e-58 229.6 332 47.0
Glyma.08G057000 Glycine max HOM05D007187 ORTHO05D009219 9.2e-58 228.4 264 51.9
Lalb_Chr16g0386871 Lupinus albus HOM05D007187 ORTHO05D009219 1.2e-57 228.0 286 49.3
SMO137G0317 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 3.0e-56 223.4 310 44.5
SEGI_30595 Sequoiadendron giganteum HOM05D007187 ORTHO05D009219 4.3e-55 219.5 297 45.5
Mapoly0047s0078 Marchantia polymorpha HOM05D007187 ORTHO05D009219 3.6e-54 216.5 341 40.8
Ca_17169_v3 Cicer arietinum L. HOM05D005071 ORTHO05D006069 8.1e-54 215.3 256 49.6
Sc10g0008990 Simmondsia chinensis HOM05D007187 ORTHO05D009219 2.0e-52 210.7 326 42.3
vmacro17853 Vaccinium macrocarpon HOM05D007187 ORTHO05D009219 1.4e-50 204.5 373 41.0
Potri.015G033200 Populus trichocarpa HOM05D007187 ORTHO05D009219 2.4e-50 203.8 233 51.9
Haze_18954 Corylus avellana HOM05D007187 ORTHO05D009219 9.3e-50 201.8 290 45.9
CBR_g23710 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-47 194.5 303 41.6
FAN18G0372 Fragaria x ananassa HOM05D007187 ORTHO05D009219 9.6e-47 191.8 167 62.3
FAN08G2087 Fragaria x ananassa HOM05D007187 ORTHO05D009219 2.8e-46 190.3 144 68.1
Cpa.g.sc7.111 Carica papaya HOM05D007187 ORTHO05D009219 1.4e-45 188.0 125 76.0
CARHR066500 Cardamine hirsuta HOM05D007187 ORTHO05D009219 8.4e-43 178.7 172 57.0
SMO134G0127 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 6.0e-41 172.6 240 45.4
Psat7g000640 Pisum sativum HOM05D007187 ORTHO05D009219 1.1e-39 168.3 241 41.1
FAN08G0101 Fragaria x ananassa HOM05D007187 ORTHO05D009219 3.3e-39 166.8 244 43.4
Os09g0448900 Oryza sativa ssp. japonica HOM05D007187 ORTHO05D009219 1.4e-34 151.4 156 54.5
MSTRG.10866 Avicennia marina HOM05D007187 ORTHO05D009219 1.2e-33 148.3 102 76.5
Zm00001eb314540 Zea mays HOM05D007187 ORTHO05D009219 3.0e-32 143.7 210 41.9
MSTRG.10865 Avicennia marina HOM05D007187 ORTHO05D009219 1.6e-30 137.9 90 81.1
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 1.1e-29 135.2 323 34.1
CDE11G1050 Ceratophyllum demersum HOM05D007187 ORTHO05D009219 1.3e-27 128.3 94 71.3
Aqoxy3G04295 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 7.2e-18 95.9 94 60.6
Cre09.g407450 Chlamydomonas reinhardtii HOM05D007187 ORTHO05D009219 4.6e-17 93.2 419 24.3
Aqoxy3G04293 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 2.4e-13 80.9 83 57.8
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 1.0e-08 65.5 83 49.4
PRCOL_00002241 Prasinoderma coloniale HOM05D007187 ORTHO05D009219 6.7e-08 62.8 109 38.5
Lsat_1_v5_gn_3_52400 Lactuca sativa HOM05D007187 ORTHO05D009219 4.8e-06 56.6 36 75.0


User provided reference genes

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