Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27762 Striga asiatica HOM05D005606 ORTHO05D006446 0.0e+00 1096.3 562 100.0
MSTRG.11550 Avicennia marina HOM05D005606 ORTHO05D006446 3.7e-249 864.8 562 76.0
SalBow5G2126 Salvia bowleyana HOM05D005606 ORTHO05D006446 9.2e-248 860.1 565 76.8
Migut.O00253 Erythranthe guttata HOM05D005606 ORTHO05D006446 6.0e-231 804.3 563 72.3
Oeu038484.2 Olea europaea HOM05D005606 ORTHO05D006446 2.2e-196 689.5 598 62.4
PGSC0003DMG400025630 Solanum tuberosum HOM05D005606 ORTHO05D006446 1.1e-192 677.2 562 64.2
Oeu023545.1 Olea europaea HOM05D005606 ORTHO05D006446 7.9e-191 671.0 563 63.8
Lj5A166G73 Lonicera japonica HOM05D005606 ORTHO05D006446 5.7e-189 664.8 543 61.9
Dinv09771 Davidia involucrata HOM05D005606 ORTHO05D006446 9.7e-189 664.1 543 63.5
Sopen03g029090 Solanum pennellii HOM05D005606 ORTHO05D006446 1.7e-188 663.3 562 63.3
Solyc03g098340.4 Solanum lycopersicum HOM05D005606 ORTHO05D006446 4.8e-188 661.8 562 63.0
Cc04_g08790 Coffea canephora HOM05D005606 ORTHO05D006446 3.2e-184 649.0 565 60.9
Rhsim08G0124400 Rhododendron simsii HOM05D005606 ORTHO05D006446 1.8e-179 633.3 553 60.8
CSS0018749 Camellia sinensis var. sinensis HOM05D005606 ORTHO05D006446 3.3e-173 612.5 551 60.4
Nn4g24861 Nelumbo nucifera HOM05D005606 ORTHO05D006446 2.5e-168 596.3 544 57.5
Actinidia37370 Actinidia chinensis HOM05D005606 ORTHO05D006446 8.8e-166 587.8 507 61.9
Potri.001G013300 Populus trichocarpa HOM05D005606 ORTHO05D006446 3.4e-165 585.9 541 58.2
CiPaw.09G118900 Carya illinoinensis HOM05D005606 ORTHO05D006446 2.2e-164 583.2 561 57.9
Sabra01G0009700 Salix brachista HOM05D005606 ORTHO05D006446 2.4e-163 579.7 555 56.8
GSVIVG01012914001 Vitis vinifera HOM05D005606 ORTHO05D006446 5.4e-163 578.6 538 56.9
Aqoxy3G04204 Aquilegia oxysepala HOM05D005606 ORTHO05D006446 9.1e-163 577.8 544 57.5
Manes.03G090364 Manihot esculenta HOM05D005606 ORTHO05D006446 9.1e-163 577.8 543 56.9
Nitab4.5_0004612g0090 Nicotiana tabacum HOM05D005606 ORTHO05D006446 3.8e-161 572.4 568 57.0
Peaxi162Scf00171g00427 Petunia axillaris HOM05D005606 ORTHO05D006446 5.0e-161 572.0 559 56.5
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 1.1e-160 570.9 442 67.0
PSO063G0483 Papaver somniferum HOM05D005606 ORTHO05D006446 1.5e-160 570.5 543 56.5
PSO782G3878 Papaver somniferum HOM05D005606 ORTHO05D006446 1.2e-159 567.4 543 56.0
TWI81G0505 Tripterygium wilfordii HOM05D005606 ORTHO05D006446 2.1e-159 566.6 548 57.3
Manes.15G103000 Manihot esculenta HOM05D005606 ORTHO05D006446 1.8e-155 553.5 544 55.3
Cfa000886 Carpinus fangiana HOM05D005606 ORTHO05D006446 2.4e-155 553.1 564 56.9
Atru.chr9.366 Acer truncatum HOM05D005606 ORTHO05D006446 3.1e-155 552.7 552 56.3
RcHm_v2.0_Chr5g0015011 Rosa chinensis HOM05D005606 ORTHO05D006446 4.1e-155 552.4 544 56.1
DCAR_010217 Daucus carota HOM05D005606 ORTHO05D006446 5.4e-155 552.0 543 55.6
Prupe.4G086400 Prunus persica HOM05D005606 ORTHO05D006446 7.0e-155 551.6 554 55.8
Eucgr.K02306 Eucalyptus grandis HOM05D005606 ORTHO05D006446 2.7e-154 549.7 547 55.8
QL05p054675 Quercus lobata HOM05D005606 ORTHO05D006446 3.8e-153 545.8 692 48.4
arahy.Tifrunner.gnm1.ann1.XD6SW7 Arachis hypogaea HOM05D005606 ORTHO05D006446 4.2e-152 542.3 544 55.5
MD05G1278400 Malus domestica HOM05D005606 ORTHO05D006446 9.5e-152 541.2 558 55.6
FvH4_3g04970 Fragaria vesca HOM05D005606 ORTHO05D006446 1.2e-151 540.8 542 54.4
Ciclev10023713m.g Citrus clementina HOM05D005606 ORTHO05D006446 2.1e-151 540.0 539 56.4
FAN21G0753 Fragaria x ananassa HOM05D005606 ORTHO05D006446 2.1e-151 540.0 545 54.5
FAN16G3646 Fragaria x ananassa HOM05D005606 ORTHO05D006446 3.6e-151 539.3 542 54.2
FAN11G2201 Fragaria x ananassa HOM05D005606 ORTHO05D006446 4.7e-151 538.9 542 54.6
PGR044G1587 Punica granatum HOM05D005606 ORTHO05D006446 8.0e-151 538.1 549 55.4
FAN25G1117 Fragaria x ananassa HOM05D005606 ORTHO05D006446 4.0e-150 535.8 542 54.2
Cpa.g.sc111.40 Carica papaya HOM05D005606 ORTHO05D006446 2.6e-149 533.1 542 54.2
Lsat_1_v5_gn_8_221 Lactuca sativa HOM05D005606 ORTHO05D006446 9.8e-149 531.2 546 55.9
Lalb_Chr20g0117701 Lupinus albus HOM05D005606 ORTHO05D006446 7.0e-147 525.0 545 54.5
CANSAT35G0050 Cannabis sativa HOM05D005606 ORTHO05D006446 1.0e-145 521.2 550 54.0
arahy.Tifrunner.gnm1.ann1.KIB2TD Arachis hypogaea HOM05D000001 ORTHO05D006446 1.1e-144 517.7 528 55.3
arahy.Tifrunner.gnm1.ann1.J0D3J2 Arachis hypogaea HOM05D005606 ORTHO05D006446 3.6e-143 512.7 522 55.0
Gohir.A08G038700 Gossypium hirsutum HOM05D005606 ORTHO05D006446 8.9e-142 508.1 543 54.1
MD10G1257000 Malus domestica HOM05D005606 ORTHO05D006446 1.5e-141 507.3 555 52.6
Thecc.03G071900 Theobroma cacao HOM05D005606 ORTHO05D006446 1.5e-141 507.3 538 54.5
CsaV3_6G052120 Cucumis sativus L. HOM05D005606 ORTHO05D006446 2.0e-141 506.9 559 51.9
ClCG01G024960 Citrullus lanatus HOM05D005606 ORTHO05D006446 2.6e-141 506.5 559 52.8
Gorai.004G048400 Gossypium raimondii HOM05D005606 ORTHO05D006446 4.4e-141 505.8 543 54.5
Lj6g0007906 Lotus japonicus HOM05D005606 ORTHO05D006446 1.3e-140 504.2 538 53.9
Gohir.D08G048900 Gossypium hirsutum HOM05D005606 ORTHO05D006446 2.9e-140 503.1 543 54.5
HanXRQChr05g0141141 Helianthus annuus HOM05D005606 ORTHO05D006446 2.9e-140 503.1 543 52.1
Sed0002755 Sechium edule HOM05D005606 ORTHO05D006446 1.4e-139 500.7 558 52.0
EL10Ac8g19487 Beta vulgaris HOM05D005606 ORTHO05D006446 9.2e-139 498.0 542 52.0
Sed0004896 Sechium edule HOM05D005606 ORTHO05D006446 2.7e-138 496.5 556 52.2
Hund06728 Selenicereus undatus HOM05D005606 ORTHO05D006446 1.7e-137 493.8 542 52.6
arahy.Tifrunner.gnm1.ann1.P0FE7Q Arachis hypogaea HOM05D005606 ORTHO05D006446 7.3e-136 488.4 472 56.8
Duzib211G0450 Durio zibethinus HOM05D005606 ORTHO05D006446 1.6e-135 487.3 543 51.9
CDE04G0503 Ceratophyllum demersum HOM05D005606 ORTHO05D006446 2.8e-135 486.5 491 53.0
Glyma.15G091800 Glycine max HOM05D005606 ORTHO05D006446 4.7e-135 485.7 540 53.1
Ca_00517_v3 Cicer arietinum L. HOM05D005606 ORTHO05D006446 4.0e-134 482.6 540 50.9
Medtr2g018830 Medicago truncatula HOM05D005606 ORTHO05D006446 2.0e-133 480.3 540 50.7
Thhalv10018404m.g Eutrema salsugineum HOM05D005606 ORTHO05D006446 9.8e-133 478.0 538 52.8
Sc04g0004710 Simmondsia chinensis HOM05D005606 ORTHO05D006446 9.8e-133 478.0 536 51.1
Sp5g28210 Schrenkiella parvula HOM05D005606 ORTHO05D006446 6.4e-132 475.3 538 52.6
MELO3C007099.2 Cucumis melo HOM05D005606 ORTHO05D006446 1.4e-131 474.2 583 48.7
AL2G33010 Arabidopsis lyrata HOM05D005606 ORTHO05D006446 1.9e-131 473.8 538 52.6
AT1G73240 Arabidopsis thaliana HOM05D005606 ORTHO05D006446 6.0e-130 468.8 540 52.4
THA.LOC104810627 Tarenaya hassleriana HOM05D005606 ORTHO05D006446 1.0e-129 468.0 537 52.7
Glyma.13G220600 Glycine max HOM05D005606 ORTHO05D006446 1.1e-128 464.5 541 51.8
AUR62041591 Chenopodium quinoa HOM05D005606 ORTHO05D006446 5.6e-128 462.2 488 54.1
BolC6t39777H Brassica oleracea HOM05D005606 ORTHO05D006446 9.5e-128 461.5 539 51.9
C06p47380 Brassica napus HOM05D005606 ORTHO05D006446 8.1e-127 458.4 539 51.6
BcaB03g15036 Brassica carinata HOM05D005606 ORTHO05D006446 1.1e-126 458.0 539 51.2
CARHR066250 Cardamine hirsuta HOM05D005606 ORTHO05D006446 3.1e-126 456.4 540 50.0
BcaC08g46742 Brassica carinata HOM05D005606 ORTHO05D006446 4.0e-126 456.1 539 51.4
BraA07t31468Z Brassica rapa HOM05D005606 ORTHO05D006446 6.8e-126 455.3 538 51.1
A07p39190 Brassica napus HOM05D005606 ORTHO05D006446 1.2e-125 454.5 538 50.9
Carub.0002s2004 Capsella rubella HOM05D005606 ORTHO05D006446 4.4e-125 452.6 540 50.0
Nitab4.5_0001180g0240 Nicotiana tabacum HOM05D005606 ORTHO05D006446 1.3e-124 451.1 577 47.3
Phvul.006G167500 Phaseolus vulgaris HOM05D005606 ORTHO05D006446 2.4e-123 446.8 392 60.7
CDE02G0130 Ceratophyllum demersum HOM05D005606 ORTHO05D006446 3.2e-123 446.4 473 51.6
Aa31LG4G3530 Aethionema arabicum HOM05D005606 ORTHO05D006446 2.5e-120 436.8 538 49.3
VMungo0540G1265 Vigna mungo HOM05D005606 ORTHO05D006446 1.8e-118 430.6 521 49.7
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 5.8e-117 425.6 477 51.6
SEGI_11499 Sequoiadendron giganteum HOM05D005606 ORTHO05D006446 3.2e-115 419.9 553 44.1
Psat1g191760 Pisum sativum HOM05D005606 ORTHO05D006446 6.6e-113 412.1 354 59.9
TAR629G2351 Trochodendron aralioides HOM05D005606 ORTHO05D006446 8.1e-111 405.2 387 58.9
vmacro17739 Vaccinium macrocarpon HOM05D005606 ORTHO05D006446 2.3e-105 387.1 353 58.9
Medtr8g007580 Medicago truncatula HOM05D005606 ORTHO05D006446 1.5e-104 384.4 537 45.3
unitig_750.g28452 Utricularia gibba HOM05D005606 ORTHO05D006446 2.1e-98 364.0 367 55.6
Medtr8g008810 Medicago truncatula HOM05D005606 ORTHO05D006446 6.2e-95 352.4 314 60.2
Zm00001eb250810 Zea mays HOM05D005606 ORTHO05D006446 5.3e-94 349.4 431 46.4
MBI06_g43804_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 1.7e-92 344.4 379 53.0
ATR0824G067 Amborella trichopoda HOM05D005606 ORTHO05D006446 2.6e-85 320.5 386 47.4
AagrBONN_evm.TU.Sc2ySwM_228.2052 Anthoceros agrestis HOM05D005606 ORTHO05D006446 2.1e-82 310.8 530 38.1
Mapoly0061s0120 Marchantia polymorpha HOM05D005606 ORTHO05D006446 3.6e-82 310.1 536 39.4
Potri.003G213050 Populus trichocarpa HOM05D005606 ORTHO05D006446 3.6e-82 310.1 280 58.6
Pp3c23_16320 Physcomitrium patens HOM05D005606 ORTHO05D006446 4.3e-80 303.1 456 41.7
SMO358G0536 Selaginella moellendorffii HOM05D005606 ORTHO05D006446 9.4e-75 285.4 399 41.6
AUR62042457 Chenopodium quinoa HOM05D005606 ORTHO05D006446 1.0e-73 282.0 330 50.9
Zm00001eb187400 Zea mays HOM05D005606 ORTHO05D006446 3.7e-71 273.5 394 40.6
MBI06_g39886_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 5.3e-70 269.6 276 52.9
Os02g0684300 Oryza sativa ssp. japonica HOM05D005606 ORTHO05D006446 1.7e-68 264.6 262 53.1
TPR.G7652 Trifolium pratense HOM05D005606 ORTHO05D006446 4.2e-67 260.0 209 62.7
Lj9C350G3 Lonicera japonica HOM05D005606 ORTHO05D006446 3.0e-65 253.8 278 53.2
MBI06_g21907_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 1.5e-59 235.0 263 51.0
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 1.2e-58 231.9 154 73.4
Hma1.2p1_0403F.1_g145180 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 6.1e-58 229.6 160 70.0
CBR_g11193 Chara braunii HOM05D005606 ORTHO05D006446 5.2e-57 226.5 409 35.2
Hma1.2p1_0403F.1_g145190 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 4.8e-55 219.9 160 67.5
ATR0879G001 Amborella trichopoda HOM05D005606 ORTHO05D006446 8.0e-50 202.6 196 53.6
Haze_05701 Corylus avellana HOM05D005606 ORTHO05D006446 2.3e-49 201.1 270 45.6
ECA233G5513 Erigeron canadensis HOM05D005606 ORTHO05D006446 1.5e-40 171.8 197 50.8
ATR0824G212 Amborella trichopoda HOM05D005606 ORTHO05D006446 1.7e-39 168.3 157 53.5
vmacro17738 Vaccinium macrocarpon HOM05D005606 ORTHO05D006446 1.6e-37 161.8 123 67.5
Aqoxy3G04211 Aquilegia oxysepala HOM05D005606 ORTHO05D006446 2.0e-32 144.8 271 39.9
Medtr8g008813 Medicago truncatula HOM05D005606 ORTHO05D006446 1.2e-29 135.6 138 54.3
TPR.G20455 Trifolium pratense HOM05D005606 ORTHO05D006446 1.0e-28 132.5 120 57.5
Hma1.2p1_0403F.1_g145170 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 5.0e-28 130.2 198 41.4
Hma1.2p1_2967F.1_g331010 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 6.6e-28 129.8 241 38.2
Medtr0199s0020 Medicago truncatula HOM05D005606 ORTHO05D006446 6.6e-20 103.2 112 50.9
Migut.N00941 Erythranthe guttata HOM05D053082 ORTHO05D006446 2.5e-19 101.3 182 41.8
Ah.15g099030 Amaranthus hybridus HOM05D002838 ORTHO05D002114 2.4e-14 84.7 103 49.5
Sabra03G0155900 Salix brachista HOM05D005606 ORTHO05D006446 2.7e-13 81.3 94 47.9
Sabra03G0159100 Salix brachista HOM05D005606 ORTHO05D006446 2.7e-13 81.3 94 47.9
TPR.G26262 Trifolium pratense HOM05D005606 ORTHO05D006446 2.7e-13 81.3 183 34.4
Oeu061196.1 Olea europaea HOM05D005606 ORTHO05D006446 2.3e-12 78.2 96 51.0
BcaC01g04920 Brassica carinata HOM05D005606 ORTHO05D006446 1.3e-07 62.4 150 37.3


User provided reference genes

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