Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 3.2e-243 844.7 443 100.0
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 2.8e-143 512.7 458 65.3
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 3.3e-139 499.2 449 63.3
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 2.4e-134 483.0 450 60.4
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 2.2e-127 459.9 402 64.4
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 7.1e-110 401.7 466 51.9
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.5e-104 384.0 478 49.2
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 3.5e-101 372.9 487 49.3
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 1.3e-98 364.4 429 50.8
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 6.2e-98 362.1 352 55.7
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.0e-96 357.1 447 48.5
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 1.3e-95 354.4 444 46.4
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 7.1e-94 348.6 347 53.0
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 1.7e-92 344.0 444 45.7
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 4.3e-91 339.3 449 45.4
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 1.8e-89 334.0 459 47.9
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 3.4e-88 329.7 430 46.7
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 1.3e-87 327.8 469 46.1
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 2.2e-87 327.0 465 45.2
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 6.4e-87 325.5 467 45.6
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 6.4e-87 325.5 453 46.1
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 1.9e-86 323.9 378 47.9
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 5.4e-86 322.4 388 49.7
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 2.7e-85 320.1 462 44.2
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 2.7e-85 320.1 258 63.2
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 3.5e-85 319.7 449 46.5
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 1.0e-84 318.2 391 48.1
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 1.3e-84 317.8 467 47.1
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 2.3e-84 317.0 465 44.3
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 2.3e-84 317.0 463 45.8
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 3.9e-84 316.2 437 45.3
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 1.1e-83 314.7 460 44.1
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 1.1e-83 314.7 398 47.0
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 1.5e-83 314.3 445 45.6
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 1.9e-83 313.9 465 44.1
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 1.9e-83 313.9 451 45.2
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 7.4e-83 312.0 421 47.7
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 1.3e-82 311.2 449 45.9
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 8.1e-82 308.5 365 51.2
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 1.8e-81 307.4 437 44.6
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.4e-81 307.0 434 45.9
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 4.0e-81 306.2 466 44.2
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 4.0e-81 306.2 465 43.9
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 5.3e-81 305.8 462 43.1
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 9.0e-81 305.1 456 44.1
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 1.5e-80 304.3 337 49.3
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 2.6e-80 303.5 439 43.7
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 3.4e-80 303.1 464 44.2
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 5.8e-80 302.4 326 54.3
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 5.8e-80 302.4 456 44.5
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 5.8e-80 302.4 478 43.9
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 2.9e-79 300.1 451 44.8
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 3.8e-79 299.7 444 42.1
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 6.5e-79 298.9 455 43.3
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 8.4e-79 298.5 452 44.2
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 1.9e-78 297.4 448 44.4
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 3.2e-78 296.6 331 51.4
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 9.3e-78 295.0 467 43.5
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 9.3e-78 295.0 450 44.4
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 1.2e-77 294.7 383 47.0
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 2.3e-76 290.4 338 49.7
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 2.3e-76 290.4 450 43.8
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 3.0e-76 290.0 329 50.8
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 3.9e-76 289.7 324 49.1
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 6.7e-76 288.9 337 50.7
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.1e-75 288.1 346 49.1
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 1.5e-75 287.7 320 51.2
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 1.9e-75 287.3 345 49.6
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 1.9e-75 287.3 345 49.6
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 1.9e-75 287.3 340 50.0
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.9e-75 287.3 257 59.1
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.3e-75 286.2 335 49.3
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 5.7e-75 285.8 455 42.6
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 5.7e-75 285.8 379 46.2
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 2.8e-74 283.5 220 63.6
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 4.8e-74 282.7 239 58.6
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 8.2e-74 282.0 455 42.4
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 1.1e-73 281.6 349 49.6
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 1.8e-73 280.8 340 48.2
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 2.4e-73 280.4 345 49.6
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 3.1e-73 280.0 341 48.4
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 1.2e-72 278.1 339 48.4
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 2.0e-72 277.3 320 50.0
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 2.2e-71 273.9 244 58.2
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 5.0e-71 272.7 245 57.6
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 7.1e-70 268.9 345 47.2
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 7.1e-70 268.9 506 40.5
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 1.8e-68 264.2 373 46.1
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 1.8e-68 264.2 452 42.5
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 8.7e-68 261.9 379 45.9
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 1.5e-67 261.2 231 58.4
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 5.9e-64 249.2 378 40.2
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 1.6e-61 241.1 450 39.6
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 8.8e-60 235.3 250 52.4
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 9.1e-57 225.3 311 40.5
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 2.7e-53 213.8 147 71.4
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 6.1e-53 212.6 232 48.3
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 7.9e-53 212.2 382 38.0
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.3e-50 204.9 442 38.0
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 1.2e-48 198.4 252 42.1
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.2e-48 198.4 446 32.5
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 7.7e-48 195.7 159 59.7
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 3.8e-47 193.4 256 45.7
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 2.5e-46 190.7 364 39.0
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 8.0e-45 185.7 238 45.8
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 8.8e-44 182.2 124 67.7
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.1e-41 173.7 125 66.4
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 1.4e-36 158.3 211 46.4
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 8.5e-31 139.0 121 59.5
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 3.2e-30 137.1 189 44.4
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 3.7e-26 123.6 345 32.8
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 3.7e-26 123.6 162 39.5
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 4.3e-22 110.2 189 34.9
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 3.0e-20 104.0 143 37.1
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 7.5e-19 99.4 80 62.5
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 2.4e-17 94.4 74 62.2
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 4.1e-17 93.6 172 34.9
SMO117G0021 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 6.6e-07 59.7 135 33.3


User provided reference genes

Program Settings