Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27648 Striga asiatica HOM05D003473 ORTHO05D003872 2.4e-124 448.7 214 100.0
SGA_v2.0_scaffold18G08388 Striga asiatica HOM05D003473 ORTHO05D003872 3.4e-86 322.0 265 64.2
SGA_v2.0_scaffold26G11350 Striga asiatica HOM05D003473 ORTHO05D003872 2.6e-65 252.7 129 90.7
SGA_v2.0_scaffold2G01010 Striga asiatica HOM05D003473 ORTHO05D003872 4.2e-60 235.3 264 51.1
MSTRG.8227 Avicennia marina HOM05D003473 ORTHO05D003872 4.0e-50 202.2 263 43.3
SalBow6G1341 Salvia bowleyana HOM05D003473 ORTHO05D003872 8.8e-50 201.1 289 42.2
Sed0013546 Sechium edule HOM05D003473 ORTHO05D003872 1.2e-49 200.7 264 42.8
ECA238G4809 Erigeron canadensis HOM05D003473 ORTHO05D003872 3.4e-49 199.1 264 43.6
Nitab4.5_0011129g0030 Nicotiana tabacum HOM05D003473 ORTHO05D003872 3.4e-49 199.1 263 43.3
MSTRG.314 Avicennia marina HOM05D003473 ORTHO05D003872 7.5e-49 198.0 260 42.7
HanXRQChr14g0454231 Helianthus annuus HOM05D003473 ORTHO05D003872 4.9e-48 195.3 264 42.4
Cc02_g08740 Coffea canephora HOM05D003473 ORTHO05D003872 8.3e-48 194.5 283 40.3
Nitab4.5_0001913g0170 Nicotiana tabacum HOM05D003473 ORTHO05D003872 1.1e-47 194.1 263 43.0
Thecc.05G270100 Theobroma cacao HOM05D003473 ORTHO05D003872 1.8e-47 193.4 264 42.0
Dinv15516 Davidia involucrata HOM05D003473 ORTHO05D003872 2.4e-47 193.0 264 42.4
Dinv25278 Davidia involucrata HOM05D003473 ORTHO05D003872 2.4e-47 193.0 264 42.4
FvH4_6g01760 Fragaria vesca HOM05D003473 ORTHO05D003872 4.1e-47 192.2 264 42.4
Lsat_1_v5_gn_2_108280 Lactuca sativa HOM05D003473 ORTHO05D003872 4.1e-47 192.2 267 41.9
ClCG11G010530 Citrullus lanatus HOM05D003473 ORTHO05D003872 5.4e-47 191.8 264 41.7
Duzib177G0657 Durio zibethinus HOM05D003473 ORTHO05D003872 5.4e-47 191.8 264 42.4
TWI36G0550 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 5.4e-47 191.8 264 41.7
FAN09G4673 Fragaria x ananassa HOM05D003473 ORTHO05D003872 7.0e-47 191.4 264 41.3
Cpa.g.sc306.6 Carica papaya HOM05D003473 ORTHO05D003872 9.2e-47 191.0 264 40.9
CsaV3_2G009860 Cucumis sativus L. HOM05D003473 ORTHO05D003872 1.2e-46 190.7 264 41.3
FAN14G1733 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.2e-46 190.7 264 42.4
Sc20g0000670 Simmondsia chinensis HOM05D003473 ORTHO05D003872 1.2e-46 190.7 264 41.7
Sp2g19990 Schrenkiella parvula HOM05D003473 ORTHO05D003872 2.7e-46 189.5 261 40.6
FAN14G5108 Fragaria x ananassa HOM05D003473 ORTHO05D003872 3.5e-46 189.1 264 42.0
Manes.08G140000 Manihot esculenta HOM05D003473 ORTHO05D003872 3.5e-46 189.1 264 41.3
THA.LOC104820771 Tarenaya hassleriana HOM05D003473 ORTHO05D003872 3.5e-46 189.1 270 41.5
Eucgr.B02153 Eucalyptus grandis HOM05D003473 ORTHO05D003872 4.5e-46 188.7 264 41.3
CAN.G24.3 Capsicum annuum HOM05D003473 ORTHO05D003872 5.9e-46 188.3 271 42.1
Lj2C44G25 Lonicera japonica HOM05D003473 ORTHO05D003872 5.9e-46 188.3 265 42.3
BcaC06g30691 Brassica carinata HOM05D003473 ORTHO05D003872 1.0e-45 187.6 259 40.5
FAN02G1417 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.0e-45 187.6 264 41.3
Gohir.D11G256800 Gossypium hirsutum HOM05D003473 ORTHO05D003872 1.0e-45 187.6 266 42.1
Gorai.007G275200 Gossypium raimondii HOM05D003473 ORTHO05D003872 1.0e-45 187.6 266 42.1
RcHm_v2.0_Chr3g0449501 Rosa chinensis HOM05D003473 ORTHO05D003872 1.0e-45 187.6 265 41.9
GSVIVG01023451001 Vitis vinifera HOM05D003473 ORTHO05D003872 1.0e-45 187.6 262 39.7
Aa31LG11G8510 Aethionema arabicum HOM05D003473 ORTHO05D003872 1.3e-45 187.2 260 40.4
C09p05430 Brassica napus HOM05D003473 ORTHO05D003872 1.3e-45 187.2 264 41.3
CANSAT54G3011 Cannabis sativa HOM05D003473 ORTHO05D003872 1.3e-45 187.2 264 40.5
BraA09t36141Z Brassica rapa HOM05D003473 ORTHO05D003872 1.7e-45 186.8 262 42.0
Hma1.2p1_1007F.1_g247110 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 1.7e-45 186.8 264 41.7
MD12G1249300 Malus domestica HOM05D003473 ORTHO05D003872 1.7e-45 186.8 264 39.8
TAR362G0719 Trochodendron aralioides HOM05D003473 ORTHO05D003872 1.7e-45 186.8 264 41.3
Gohir.A11G246500 Gossypium hirsutum HOM05D003473 ORTHO05D003872 2.3e-45 186.4 264 40.9
BcaB04g19636 Brassica carinata HOM05D003473 ORTHO05D003872 2.9e-45 186.0 264 40.9
MD04G1231000 Malus domestica HOM05D003473 ORTHO05D003872 2.9e-45 186.0 264 40.5
PGSC0003DMG400028063 Solanum tuberosum HOM05D003473 ORTHO05D003872 2.9e-45 186.0 264 41.3
vmacro10372 Vaccinium macrocarpon HOM05D003473 ORTHO05D003872 2.9e-45 186.0 224 47.3
EL10Ac4g08995 Beta vulgaris HOM05D003473 ORTHO05D003872 3.8e-45 185.7 268 40.7
BcaC04g23717 Brassica carinata HOM05D003473 ORTHO05D003872 3.8e-45 185.7 264 40.9
BraA06t26728Z Brassica rapa HOM05D003473 ORTHO05D003872 3.8e-45 185.7 259 40.2
MELO3C008699.2 Cucumis melo HOM05D003473 ORTHO05D003872 3.8e-45 185.7 264 40.5
Medtr7g115570 Medicago truncatula HOM05D003473 ORTHO05D003872 3.8e-45 185.7 272 39.3
A06p38150 Brassica napus HOM05D003473 ORTHO05D003872 6.6e-45 184.9 259 39.8
FAN05G2419 Fragaria x ananassa HOM05D003473 ORTHO05D003872 6.6e-45 184.9 265 41.1
A09p05020 Brassica napus HOM05D003473 ORTHO05D003872 8.6e-45 184.5 263 40.3
Prupe.6G350700 Prunus persica HOM05D003473 ORTHO05D003872 8.6e-45 184.5 264 40.2
Hma1.2p1_1007F.1_g247120 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 1.1e-44 184.1 264 40.2
TWI56G1190 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 1.1e-44 184.1 264 41.3
AT5G28960 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 1.5e-44 183.7 262 39.3
Carub.0006s2613 Capsella rubella HOM05D003473 ORTHO05D003872 1.5e-44 183.7 262 39.7
Thhalv10003947m.g Eutrema salsugineum HOM05D003473 ORTHO05D003872 1.9e-44 183.3 267 39.3
Potri.019G019800 Populus trichocarpa HOM05D003473 ORTHO05D003872 1.9e-44 183.3 263 40.7
QL03p029857 Quercus lobata HOM05D003473 ORTHO05D003872 1.9e-44 183.3 264 39.4
Sopen06g012690 Solanum pennellii HOM05D003473 ORTHO05D003872 1.9e-44 183.3 265 40.0
arahy.Tifrunner.gnm1.ann1.F06EBP Arachis hypogaea HOM05D003473 ORTHO05D003872 2.5e-44 183.0 271 38.7
Psat3g006840 Pisum sativum HOM05D003473 ORTHO05D003872 2.5e-44 183.0 272 38.6
Solyc06g036640.4 Solanum lycopersicum HOM05D003473 ORTHO05D003872 2.5e-44 183.0 265 40.0
arahy.Tifrunner.gnm1.ann1.T51LW4 Arachis hypogaea HOM05D003473 ORTHO05D003872 3.3e-44 182.6 271 38.7
Ciclev10019419m.g Citrus clementina HOM05D003473 ORTHO05D003872 3.3e-44 182.6 265 41.5
FAN05G0941 Fragaria x ananassa HOM05D003473 ORTHO05D003872 3.3e-44 182.6 265 41.1
TPR.G6958 Trifolium pratense HOM05D003473 ORTHO05D003872 5.6e-44 181.8 267 39.3
Aa31LG5G14900 Aethionema arabicum HOM05D003473 ORTHO05D003872 9.5e-44 181.0 260 40.8
BcaNung02116 Brassica carinata HOM05D003473 ORTHO05D003872 1.2e-43 180.6 263 40.7
C07p40060 Brassica napus HOM05D003473 ORTHO05D003872 1.2e-43 180.6 263 40.7
BolC7t44541H Brassica oleracea HOM05D003473 ORTHO05D003872 1.2e-43 180.6 263 40.7
PGR142G0316 Punica granatum HOM05D003473 ORTHO05D003872 1.2e-43 180.6 266 39.1
BolC9t53472H Brassica oleracea HOM05D003473 ORTHO05D003872 1.6e-43 180.3 262 40.1
CARHR185420 Cardamine hirsuta HOM05D003473 ORTHO05D003872 1.6e-43 180.3 263 40.7
Potri.013G047600 Populus trichocarpa HOM05D003473 ORTHO05D003872 1.6e-43 180.3 266 41.4
Lj5g0017612 Lotus japonicus HOM05D003473 ORTHO05D003872 2.1e-43 179.9 267 39.0
Nn1g02856 Nelumbo nucifera HOM05D003473 ORTHO05D003872 2.1e-43 179.9 264 38.6
Aqoxy2G03708 Aquilegia oxysepala HOM05D003473 ORTHO05D003872 2.8e-43 179.5 264 40.2
Migut.F01540 Erythranthe guttata HOM05D003473 ORTHO05D003872 2.8e-43 179.5 264 40.9
Glyma.03G250300 Glycine max HOM05D003473 ORTHO05D003872 2.8e-43 179.5 265 37.4
Ca_10021_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 3.6e-43 179.1 252 39.7
Ca_29585_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 3.6e-43 179.1 252 39.7
AT5G28910 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 4.7e-43 178.7 263 39.9
CSS0019381 Camellia sinensis var. sinensis HOM05D003473 ORTHO05D003872 4.7e-43 178.7 285 39.6
CDE08G1169 Ceratophyllum demersum HOM05D003473 ORTHO05D003872 4.7e-43 178.7 255 40.8
Lalb_Chr06g0168251 Lupinus albus HOM05D003473 ORTHO05D003872 6.1e-43 178.3 268 39.9
Oeu014528.1 Olea europaea HOM05D003473 ORTHO05D003872 6.1e-43 178.3 264 40.2
HPP92_020845 Vanilla planifolia HOM05D003473 ORTHO05D003872 6.1e-43 178.3 264 39.4
CiPaw.07G073400 Carya illinoinensis HOM05D003473 ORTHO05D003872 8.0e-43 177.9 264 38.6
Lalb_Chr02g0149051 Lupinus albus HOM05D003473 ORTHO05D003872 8.0e-43 177.9 265 38.9
Medtr1g080320 Medicago truncatula HOM05D003473 ORTHO05D003872 8.0e-43 177.9 265 37.7
Peaxi162Scf00718g00014 Petunia axillaris HOM05D003473 ORTHO05D003872 8.0e-43 177.9 219 45.2
Glyma.20G223600 Glycine max HOM05D003473 ORTHO05D003872 2.3e-42 176.4 266 38.0
ATR0736G092 Amborella trichopoda HOM05D003473 ORTHO05D003872 3.0e-42 176.0 264 40.2
AL6G40940 Arabidopsis lyrata HOM05D003473 ORTHO05D003872 3.0e-42 176.0 263 38.8
Carub.0007s3766 Capsella rubella HOM05D003473 ORTHO05D003872 3.0e-42 176.0 263 38.8
Carub.0006s2614 Capsella rubella HOM05D003473 ORTHO05D003872 4.0e-42 175.6 262 38.9
Cfa006361 Carpinus fangiana HOM05D003473 ORTHO05D003872 8.9e-42 174.5 272 39.0
Ca_09457_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 1.2e-41 174.1 272 38.2
Haze_04416 Corylus avellana HOM05D003473 ORTHO05D003872 1.5e-41 173.7 265 39.2
Os02g0809500 Oryza sativa ssp. japonica HOM05D003473 ORTHO05D003872 2.0e-41 173.3 263 39.2
PSO017G4386 Papaver somniferum HOM05D003473 ORTHO05D003872 3.4e-41 172.6 271 38.4
PSO063G4417 Papaver somniferum HOM05D003473 ORTHO05D003872 5.7e-41 171.8 264 39.0
Phvul.L001660 Phaseolus vulgaris HOM05D003473 ORTHO05D003872 5.7e-41 171.8 266 36.8
TPR.G22327 Trifolium pratense HOM05D003473 ORTHO05D003872 2.2e-40 169.9 266 36.8
AUR62004830 Chenopodium quinoa HOM05D003473 ORTHO05D003872 2.9e-40 169.5 222 43.2
Duzib128G0977 Durio zibethinus HOM05D003473 ORTHO05D003872 2.9e-40 169.5 257 38.9
Lj3g0009325 Lotus japonicus HOM05D003473 ORTHO05D003872 2.9e-40 169.5 261 38.3
AUR62040917 Chenopodium quinoa HOM05D003473 ORTHO05D003872 3.7e-40 169.1 222 42.8
arahy.Tifrunner.gnm1.ann1.K8P0T6 Arachis hypogaea HOM05D003473 ORTHO05D003872 4.9e-40 168.7 268 36.2
Glyma.10G165600 Glycine max HOM05D003473 ORTHO05D003872 4.9e-40 168.7 266 36.1
DCAR_030978 Daucus carota HOM05D003473 ORTHO05D003872 8.3e-40 167.9 264 39.8
Sabra13G0043500 Salix brachista HOM05D003473 ORTHO05D003872 2.4e-39 166.4 238 43.3
MBI07_g31076_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 3.2e-39 166.0 255 40.8
RhsimUnG0083500 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.0e-37 161.0 203 44.8
Eucgr.B02152 Eucalyptus grandis HOM05D003473 ORTHO05D003872 1.9e-36 156.8 292 34.6
Rhsim09G0135600 Rhododendron simsii HOM05D003473 ORTHO05D003872 5.6e-36 155.2 187 46.0
Eucgr.B02425 Eucalyptus grandis HOM05D003473 ORTHO05D003872 7.3e-36 154.8 259 39.4
Rhsim09G0135200 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.2e-35 154.1 187 45.5
SGA_v2.0_scaffold158G37446 Striga asiatica HOM05D003473 ORTHO05D003872 1.8e-34 150.2 172 50.0
Rhsim09G0136000 Rhododendron simsii HOM05D003473 ORTHO05D003872 5.2e-34 148.7 194 42.8
Rhsim09G0136100 Rhododendron simsii HOM05D003473 ORTHO05D003872 8.9e-34 147.9 188 45.2
unitig_749.g14016 Utricularia gibba HOM05D003473 ORTHO05D003872 1.2e-33 147.5 182 46.2
Actinidia38935 Actinidia chinensis HOM05D003473 ORTHO05D003872 1.5e-33 147.1 187 44.4
AagrBONN_evm.TU.Sc2ySwM_344.2023 Anthoceros agrestis HOM05D003473 ORTHO05D003872 2.6e-33 146.4 272 34.9
DCAR_030022 Daucus carota HOM05D003473 ORTHO05D003872 7.5e-33 144.8 299 33.4
COL.COLO4_15495 Corchorus olitorius HOM05D003473 ORTHO05D003872 2.9e-32 142.9 160 46.2
SEGI_25367 Sequoiadendron giganteum HOM05D003473 ORTHO05D003872 3.7e-32 142.5 182 41.8
Rhsim09G0136500 Rhododendron simsii HOM05D003473 ORTHO05D003872 6.4e-32 141.7 188 43.6
Rhsim09G0136400 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.4e-31 139.8 205 42.0
AagrBONN_evm.TU.Sc2ySwM_228.1748 Anthoceros agrestis HOM05D003473 ORTHO05D003872 3.2e-31 139.4 267 33.3
AagrBONN_evm.TU.Sc2ySwM_344.2742 Anthoceros agrestis HOM05D003473 ORTHO05D003872 5.4e-31 138.7 264 32.2
Atru.chr2.998 Acer truncatum HOM05D003473 ORTHO05D003872 9.2e-31 137.9 160 43.8
AagrBONN_evm.TU.Sc2ySwM_228.1715 Anthoceros agrestis HOM05D003473 ORTHO05D003872 2.7e-30 136.3 223 34.5
AagrBONN_evm.TU.Sc2ySwM_228.1714 Anthoceros agrestis HOM05D003473 ORTHO05D003872 3.0e-29 132.9 223 35.4
MBI07_g22622_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 3.9e-29 132.5 163 42.9
Carub.0006s2615 Capsella rubella HOM05D003473 ORTHO05D003872 2.5e-28 129.8 254 35.4
Carub.0048s0001 Capsella rubella HOM05D003473 ORTHO05D003872 3.3e-28 129.4 240 36.2
SMO351G0042 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-27 127.5 269 31.2
SMO351G0391 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-27 127.5 265 32.5
VMungo0720G0613 Vigna mungo HOM05D003473 ORTHO05D003872 1.4e-26 124.0 161 39.1
RhsimUnG0155700 Rhododendron simsii HOM05D003473 ORTHO05D003872 5.8e-25 118.6 190 39.5
SMO241G0019 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.7e-24 117.1 274 29.6
SMO241G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.2e-24 116.7 263 28.5
SMO116G0126 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.9e-24 115.5 267 29.6
SMO347G0181 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.1e-23 114.4 251 30.7
SMO235G0055 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.4e-23 113.2 204 36.3
SMO241G0014 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.1e-23 111.7 262 27.5
SMO232G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-22 110.9 263 28.1
SMO232G0128 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 3.5e-22 109.4 266 27.8
SMO145G0097 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 8.6e-21 104.8 255 29.4
SMO232G0037 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.5e-20 104.0 147 37.4
MBI07_g26633_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 1.6e-19 100.5 209 34.9
Sabra19G0032100 Salix brachista HOM05D003473 ORTHO05D003872 2.8e-19 99.8 188 36.2
A03p39790 Brassica napus HOM05D003473 ORTHO05D003872 1.4e-18 97.4 131 41.2
Rhsim09G0136200 Rhododendron simsii HOM05D003473 ORTHO05D003872 5.2e-18 95.5 190 34.7
SMO232G0114 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 3.4e-17 92.8 225 27.6
Oeu014529.1 Olea europaea HOM05D003473 ORTHO05D003872 3.8e-16 89.4 117 41.9
SMO232G0138 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 9.2e-15 84.7 228 27.2
CBR_g34948 Chara braunii HOM05D003473 ORTHO05D003872 1.6e-14 84.0 278 27.0
Psat6g143640 Pisum sativum HOM05D003473 ORTHO05D003872 1.9e-12 77.0 109 39.4
Atru.chr2.997 Acer truncatum HOM05D003473 ORTHO05D003872 2.8e-11 73.2 35 91.4
CBR_g1013 Chara braunii HOM05D003473 ORTHO05D003872 3.6e-11 72.8 260 25.8
CBR_g57532 Chara braunii HOM05D003473 ORTHO05D003872 2.4e-10 70.1 133 32.3
DCAR_030014 Daucus carota HOM05D003473 ORTHO05D003872 3.1e-10 69.7 35 85.7
BcaNung02115 Brassica carinata HOM05D003473 ORTHO05D003872 3.4e-09 66.2 68 39.7
C07p40070 Brassica napus HOM05D003473 ORTHO05D003872 3.4e-09 66.2 68 39.7
BolC7t44543H Brassica oleracea HOM05D003473 ORTHO05D003872 3.4e-09 66.2 68 39.7
AagrBONN_evm.TU.Sc2ySwM_228.1749 Anthoceros agrestis HOM05D003473 ORTHO05D003872 6.4e-08 62.0 120 31.7
Rhsim09G0136600 Rhododendron simsii HOM05D003473 ORTHO05D003872 6.4e-08 62.0 113 33.6


User provided reference genes

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