Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 0.0e+00 1131.7 571 100.0
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 9.5e-293 1009.6 575 88.3
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 6.6e-286 986.9 575 86.6
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 3.4e-274 948.0 573 82.5
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 2.9e-273 944.9 564 82.1
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 4.9e-273 944.1 576 81.6
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 6.4e-273 943.7 571 82.1
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 6.4e-273 943.7 581 81.8
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.4e-272 941.8 571 82.0
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 3.2e-272 941.4 582 79.6
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 7.1e-272 940.3 578 80.8
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 5.1e-270 934.1 575 80.9
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 5.1e-270 934.1 578 81.0
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 5.1e-270 934.1 579 80.5
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 6.7e-270 933.7 575 80.2
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 2.5e-269 931.8 575 80.0
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 5.6e-269 930.6 580 79.8
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 7.4e-269 930.2 575 80.3
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 9.6e-269 929.9 575 80.9
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 4.8e-268 927.5 518 87.1
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 4.8e-268 927.5 544 82.7
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 6.2e-268 927.2 575 80.3
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 8.1e-268 926.8 575 80.2
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 8.1e-268 926.8 574 80.0
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 1.1e-267 926.4 579 80.1
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 1.8e-267 925.6 575 79.8
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 4.0e-267 924.5 573 80.6
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 5.3e-267 924.1 575 79.3
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 9.0e-267 923.3 544 82.5
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.2e-266 922.9 575 80.0
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 2.0e-266 922.2 575 79.5
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 2.0e-266 922.2 577 79.7
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 5.8e-266 920.6 582 78.9
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 1.3e-265 919.5 546 81.9
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 2.2e-265 918.7 586 79.4
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 1.9e-264 915.6 615 75.6
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 4.2e-264 914.4 580 77.8
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 4.2e-264 914.4 525 84.8
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 1.2e-263 912.9 582 78.0
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 1.2e-263 912.9 582 77.8
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 7.9e-263 910.2 522 84.7
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 7.9e-263 910.2 580 77.6
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 1.0e-262 909.8 571 79.3
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 1.3e-262 909.4 577 79.2
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 2.3e-262 908.7 522 84.9
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 3.9e-262 907.9 575 78.4
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 8.7e-262 906.7 521 84.6
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 1.1e-261 906.4 525 83.2
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 1.1e-261 906.4 525 84.2
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 5.6e-261 904.0 522 84.5
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 5.6e-261 904.0 584 76.0
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 7.4e-261 903.7 582 76.5
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 2.1e-260 902.1 522 84.5
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 2.1e-260 902.1 567 79.4
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 2.8e-260 901.7 601 75.9
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 2.8e-260 901.7 518 84.2
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 3.7e-260 901.4 684 69.6
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 4.8e-260 901.0 557 79.2
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 1.1e-259 899.8 567 78.1
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 1.1e-259 899.8 582 76.8
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 1.8e-259 899.0 585 75.6
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 9.0e-259 896.7 584 75.3
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 9.0e-259 896.7 585 75.4
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 2.0e-258 895.6 585 75.2
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 2.0e-258 895.6 586 75.3
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 3.4e-258 894.8 573 78.5
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 5.8e-258 894.0 542 80.1
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 1.0e-257 893.3 575 78.3
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 1.3e-257 892.9 576 76.6
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 1.3e-257 892.9 586 74.9
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 4.9e-257 891.0 510 85.3
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 8.4e-257 890.2 546 77.8
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 8.4e-257 890.2 588 74.3
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 1.1e-256 889.8 588 74.5
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 1.4e-256 889.4 586 74.4
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 1.9e-256 889.0 586 74.4
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 7.1e-256 887.1 520 82.1
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 9.3e-256 886.7 578 76.1
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 9.3e-256 886.7 590 73.9
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 2.1e-255 885.6 589 75.2
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 3.5e-255 884.8 588 74.1
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 1.8e-254 882.5 575 76.5
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 3.9e-254 881.3 580 76.0
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 5.1e-254 880.9 575 76.2
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 5.1e-254 880.9 566 75.8
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 5.7e-253 877.5 576 76.4
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 1.3e-252 876.3 567 75.7
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 3.7e-252 874.8 599 73.6
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 9.0e-251 870.2 571 77.4
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 4.5e-250 867.8 582 74.2
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 1.6e-247 859.4 551 76.8
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 2.3e-246 855.5 570 76.5
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 1.1e-245 853.2 546 76.4
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 7.7e-242 840.5 585 71.3
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 2.3e-238 828.9 465 86.5
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 2.8e-236 822.0 540 73.7
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 2.8e-236 822.0 541 74.1
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 1.1e-235 820.1 499 82.4
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 3.5e-234 815.1 517 77.8
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 2.3e-230 802.4 488 82.2
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 4.1e-227 791.6 541 70.8
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 5.0e-225 784.6 468 82.3
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 2.1e-223 779.2 468 79.3
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 1.1e-219 766.9 540 70.7
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 1.8e-219 766.1 439 85.2
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 7.0e-219 764.2 465 80.0
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 2.7e-215 752.3 443 82.6
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 5.9e-202 708.0 537 66.3
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 4.1e-195 685.3 550 61.3
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 7.1e-187 657.9 462 71.9
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 5.1e-177 625.2 580 60.5
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 6.4e-172 608.2 527 59.6
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 7.8e-170 601.3 563 55.1
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 6.4e-156 555.1 447 60.9
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 5.8e-149 531.9 498 54.4
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 2.4e-134 483.4 334 72.2
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 1.1e-126 458.0 288 79.5
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 3.3e-83 313.5 254 60.2
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 3.5e-77 293.5 158 87.3
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 2.4e-54 217.6 488 30.7
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 4.9e-39 166.8 208 49.0
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 6.9e-33 146.4 90 78.9
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 3.2e-30 137.5 431 25.1
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 7.6e-24 116.3 122 58.2
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 1.3e-18 99.0 75 65.3
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 4.8e-18 97.1 65 66.2
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 5.9e-08 63.5 30 96.7
CDE05G3043 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 1.3e-07 62.4 369 23.6
Cfa022865 Carpinus fangiana HOM05D003397 ORTHO05D004390 1.4e-06 58.9 273 25.3
MCO15G166 Micromonas commoda HOM05D003397 ORTHO05D004390 7.2e-06 56.6 289 24.2


User provided reference genes

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