Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-279 964.5 486 100.0
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-92 344.0 478 39.3
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-92 342.4 367 52.0
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 2.5e-84 317.0 469 43.5
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 4.6e-78 296.2 544 33.3
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 7.8e-78 295.4 559 32.7
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 7.3e-68 262.3 500 33.4
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-67 260.0 565 30.6
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 8.1e-67 258.8 489 34.4
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-62 243.4 490 33.3
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 7.4e-60 235.7 238 45.8
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-58 231.9 526 29.1
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-58 231.9 332 37.3
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-58 231.5 419 33.7
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-57 228.0 550 30.2
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 2.6e-57 227.3 374 34.0
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 7.6e-57 225.7 421 34.4
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-56 223.0 491 30.8
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 3.2e-55 220.3 563 29.7
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-55 219.9 457 31.5
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 7.1e-55 219.2 458 31.2
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-54 218.4 553 29.7
SGA_v2.0_scaffold122G33346 Striga asiatica HOM05D031284 ORTHO05D009014 1.0e-53 215.3 469 34.8
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-52 210.7 555 29.0
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-48 198.4 476 27.9
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-48 196.4 490 29.0
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-48 196.1 433 31.4
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 7.1e-47 192.6 481 29.5
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-45 186.0 334 31.1
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-43 181.0 372 30.4
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.8e-42 177.9 492 27.6
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 5.3e-42 176.4 301 34.6
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-40 172.2 559 27.0
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-40 169.5 345 30.7
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 8.5e-40 169.1 487 28.7
SGA_v2.0_scaffold72G24094 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-39 168.3 95 93.7
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 7.9e-38 162.5 265 32.8
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 3.3e-36 157.1 459 27.7
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 4.3e-36 156.8 336 32.4
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 5.7e-36 156.4 131 55.0
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 9.1e-34 149.1 143 49.0
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-33 148.7 478 26.8
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 1.4e-31 141.7 287 30.0
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 2.5e-31 141.0 141 47.5
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-31 140.2 294 31.6
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 5.5e-31 139.8 329 28.6
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 7.2e-31 139.4 288 31.9
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 9.4e-31 139.0 142 51.4
SGA_v2.0_scaffold92G28297 Striga asiatica HOM05D031284 ORTHO05D009014 1.2e-30 138.7 194 49.0
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 7.9e-30 136.0 225 34.2
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 2.3e-29 134.4 139 47.5
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-27 128.6 448 27.2
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-26 125.2 124 45.2
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 5.3e-26 123.2 275 31.3
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 7.0e-26 122.9 354 25.1
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-25 122.1 289 29.1
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-24 117.9 168 33.9
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-24 117.1 273 30.0
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 1.1e-23 115.5 154 39.6
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-23 114.8 268 28.7
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 9.4e-23 112.5 484 24.0
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-21 106.3 141 42.6
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 2.6e-20 104.4 270 28.5
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-19 101.7 210 30.5
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-19 101.3 89 49.4
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 5.9e-17 93.2 187 26.7
Cc11_g04420 Coffea canephora HOM05D006612 ORTHO05D009014 1.3e-16 92.0 114 42.1
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 1.3e-16 92.0 240 27.9
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 1.7e-16 91.7 81 46.9
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-16 90.9 141 37.6
Cc02_g21340 Coffea canephora HOM05D006612 ORTHO05D009014 3.8e-16 90.5 130 35.4
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-16 90.5 269 27.1
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 8.5e-16 89.4 282 25.9
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-15 89.0 306 23.5
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 1.1e-15 89.0 282 25.9
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 1.1e-15 89.0 282 25.9
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-15 87.8 86 41.9
Sopen02g008580 Solanum pennellii HOM05D002261 ORTHO05D002334 9.4e-15 85.9 287 25.1
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 9.4e-15 85.9 142 34.5
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 4.7e-14 83.6 248 25.0
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.1e-14 83.2 180 25.6
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 6.1e-14 83.2 242 26.0
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-13 82.4 137 31.4
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 6.7e-13 79.7 193 25.9
Oeu030897.1 Olea europaea HOM05D008860 ORTHO05D010619 8.8e-13 79.3 167 30.5
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-12 79.0 290 23.4
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-12 79.0 265 25.3
Sopen07g011000 Solanum pennellii HOM05D000004 ORTHO05D002334 3.3e-12 77.4 133 34.6
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 5.7e-12 76.6 136 35.3
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 1.7e-11 75.1 307 22.1
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 3.7e-11 73.9 278 25.9
Cc00_g35160 Coffea canephora HOM05D006612 ORTHO05D009014 4.8e-11 73.6 137 29.9
Cc00_g13000 Coffea canephora HOM05D006612 ORTHO05D009014 6.3e-11 73.2 69 47.8
Atru.chr12.1651 Acer truncatum HOM05D000096 ORTHO05D000045 8.2e-11 72.8 259 23.2
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 8.2e-11 72.8 98 37.8
Cc03_g10290 Coffea canephora HOM05D006612 ORTHO05D009014 1.1e-10 72.4 103 33.0
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 1.1e-10 72.4 136 30.1
SGA_v2.0_scaffold3598G54367 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-10 72.4 112 31.2
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 2.4e-10 71.2 141 31.2
SGA_v2.0_scaffold4G02280 Striga asiatica HOM05D021043 ORTHO05D009014 2.4e-10 71.2 193 27.5
Nitab4.5_0003349g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.1e-10 70.5 193 26.9
Dinv36352 Davidia involucrata HOM05D009267 ORTHO05D000302 5.3e-10 70.1 195 26.2
Sopen07g022080 Solanum pennellii HOM05D002261 ORTHO05D002334 5.3e-10 70.1 120 34.2
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 9.1e-10 69.3 98 34.7
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 1.2e-09 68.9 205 25.4
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 1.2e-09 68.9 128 32.0
SGA_v2.0_scaffold62G21622 Striga asiatica HOM05D031284 ORTHO05D009014 1.2e-09 68.9 94 38.3
Peaxi162Scf00045g02132 Petunia axillaris HOM05D002327 ORTHO05D002306 1.6e-09 68.6 329 22.5
Dinv11979 Davidia involucrata HOM05D006612 ORTHO05D009014 2.7e-09 67.8 156 28.2
Rhsim08G0116600 Rhododendron simsii HOM05D008336 ORTHO05D011520 2.7e-09 67.8 176 27.8
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 3.5e-09 67.4 141 29.8
Cc09_g00100 Coffea canephora HOM05D006612 ORTHO05D009014 3.5e-09 67.4 87 40.2
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 3.5e-09 67.4 114 33.3
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 4.5e-09 67.0 364 20.6
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.5e-09 67.0 270 24.4
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 5.9e-09 66.6 364 19.8
Peaxi162Scf00401g00528 Petunia axillaris HOM05D002327 ORTHO05D002306 5.9e-09 66.6 306 22.9
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 1.0e-08 65.9 154 27.9
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 1.0e-08 65.9 280 23.2
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-08 65.9 129 28.7
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 1.0e-08 65.9 364 20.6
SGA_v2.0_scaffold68G23014 Striga asiatica HOM05D000096 ORTHO05D000045 1.7e-08 65.1 56 48.2
Oeu057911.1 Olea europaea HOM05D008860 ORTHO05D010619 2.9e-08 64.3 238 26.1
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 3.8e-08 63.9 405 19.8
Sopen04g022620 Solanum pennellii HOM05D002261 ORTHO05D002334 3.8e-08 63.9 261 24.1
SGA_v2.0_scaffold330G48902 Striga asiatica HOM05D015626 ORTHO05D019382 3.8e-08 63.9 96 35.4
Nitab4.5_0009976g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.0e-08 63.5 171 27.5
SGA_v2.0_scaffold132G34534 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-08 63.5 230 25.7
Nitab4.5_0001504g0150 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.5e-08 63.2 143 30.1
Oeu003462.1 Olea europaea HOM05D008860 ORTHO05D010619 1.1e-07 62.4 142 30.3
Peaxi162Scf00371g00312 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-07 62.4 112 31.2
vmacro17288 Vaccinium macrocarpon HOM05D008860 ORTHO05D010619 1.9e-07 61.6 112 28.6
Oeu039609.1 Olea europaea HOM05D008860 ORTHO05D010619 4.2e-07 60.5 133 30.8
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 5.5e-07 60.1 130 26.2
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.5e-07 60.1 145 26.9
SGA_v2.0_scaffold13G06611 Striga asiatica HOM05D006612 ORTHO05D009014 7.2e-07 59.7 315 24.8
Oeu032902.1 Olea europaea HOM05D008860 ORTHO05D010619 1.2e-06 58.9 136 28.7
SGA_v2.0_scaffold2G01273 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-06 58.9 48 52.1
Nitab4.5_0002427g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-06 58.5 144 29.2
Cc07_g03400 Coffea canephora HOM05D006612 ORTHO05D009014 3.6e-06 57.4 189 21.7
Dinv03710 Davidia involucrata HOM05D015775 ORTHO05D010384 3.6e-06 57.4 63 44.4


User provided reference genes

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