Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04664 Striga asiatica HOM05D007427 ORTHO05D006413 1.2e-24 116.7 64 100.0
SGA_v2.0_scaffold1G00704 Striga asiatica HOM05D007427 ORTHO05D006413 7.3e-17 90.9 64 79.7
MSTRG.21440 Avicennia marina HOM05D007427 ORTHO05D006413 1.3e-10 70.1 57 64.9
SGA_v2.0_scaffold42G16152 Striga asiatica HOM05D007427 ORTHO05D006413 1.1e-09 67.0 69 62.3
MSTRG.17537 Avicennia marina HOM05D007427 ORTHO05D006413 1.9e-09 66.2 60 68.3
unitig_8.g3079 Utricularia gibba HOM05D007427 ORTHO05D006413 2.8e-08 62.4 46 71.7
Migut.N02250 Erythranthe guttata HOM05D007427 ORTHO05D006413 1.1e-07 60.5 58 63.8
SalBow4G2254 Salvia bowleyana HOM05D007427 ORTHO05D006413 1.1e-07 60.5 59 61.0
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 1.8e-07 59.7 64 53.1
unitig_22.g6317 Utricularia gibba HOM05D007427 ORTHO05D006413 4.0e-07 58.5 57 63.2
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 8.9e-07 57.4 60 53.3
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.2e-06 57.0 52 59.6
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 1.2e-06 57.0 35 77.1
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 1.2e-06 57.0 60 55.0
Lj1g0008336 Lotus japonicus HOM05D007427 ORTHO05D006413 3.4e-06 55.5 43 62.8
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 4.4e-06 55.1 59 54.2
DCAR_012627 Daucus carota HOM05D007427 ORTHO05D006413 5.8e-06 54.7 64 54.7
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 5.8e-06 54.7 37 73.0
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 5.8e-06 54.7 61 52.5
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 7.6e-06 54.3 35 74.3
Nitab4.5_0001740g0060 Nicotiana tabacum HOM05D007427 ORTHO05D006413 9.9e-06 53.9 63 50.8


User provided reference genes

Program Settings