Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 9.1e-88 327.0 182 100.0
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 9.8e-42 174.1 169 61.5
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 2.3e-35 152.9 182 57.1
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 4.6e-31 138.7 156 53.8
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 6.6e-30 134.8 183 53.0
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 4.3e-29 132.1 178 49.4
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 9.6e-29 131.0 156 55.8
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 8.1e-28 127.9 173 48.0
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 1.5e-26 123.6 137 54.7
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 1.5e-26 123.6 157 53.5
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 4.4e-26 122.1 188 46.8
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 5.8e-26 121.7 180 46.1
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 9.9e-26 120.9 136 55.9
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 1.3e-25 120.6 142 52.8
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 2.9e-25 119.4 137 54.0
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 3.8e-25 119.0 128 56.2
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 4.9e-25 118.6 176 46.6
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 8.4e-25 117.9 114 61.4
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 1.1e-24 117.5 159 48.4
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 1.4e-24 117.1 195 41.0
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.4e-24 117.1 126 52.4
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 2.4e-24 116.3 140 53.6
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 2.4e-24 116.3 132 54.5
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 3.2e-24 115.9 131 55.7
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 5.4e-24 115.2 141 53.2
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 5.4e-24 115.2 172 48.8
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 5.4e-24 115.2 151 50.3
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 7.1e-24 114.8 143 46.2
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 9.3e-24 114.4 181 44.2
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 1.6e-23 113.6 169 44.4
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 1.6e-23 113.6 186 43.0
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 1.6e-23 113.6 200 42.5
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 2.7e-23 112.8 115 54.8
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 2.7e-23 112.8 148 49.3
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.7e-23 112.8 126 52.4
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 2.7e-23 112.8 102 60.8
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 2.7e-23 112.8 139 48.9
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 3.5e-23 112.5 142 49.3
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 4.6e-23 112.1 134 50.0
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 4.6e-23 112.1 132 49.2
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 6.0e-23 111.7 136 51.5
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 6.0e-23 111.7 126 52.4
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 7.8e-23 111.3 128 50.8
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 1.0e-22 110.9 124 54.0
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 1.0e-22 110.9 180 43.9
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 1.7e-22 110.2 136 50.7
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 1.7e-22 110.2 109 58.7
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 2.3e-22 109.8 124 53.2
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 2.3e-22 109.8 187 44.4
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 3.0e-22 109.4 133 49.6
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 3.0e-22 109.4 169 44.4
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.0e-22 109.4 105 59.0
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 3.0e-22 109.4 121 56.2
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 3.9e-22 109.0 133 52.6
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 6.6e-22 108.2 146 49.3
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 6.6e-22 108.2 123 52.8
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 6.6e-22 108.2 163 46.6
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 6.6e-22 108.2 105 59.0
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 8.7e-22 107.8 122 54.9
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 8.7e-22 107.8 132 50.0
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.1e-21 107.5 105 58.1
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 1.5e-21 107.1 97 59.8
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 1.5e-21 107.1 104 59.6
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.5e-21 107.1 197 37.6
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 1.9e-21 106.7 98 59.2
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 1.9e-21 106.7 134 51.5
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 2.5e-21 106.3 112 52.7
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 2.5e-21 106.3 134 52.2
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 3.3e-21 105.9 133 51.9
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 3.3e-21 105.9 119 52.9
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 4.3e-21 105.5 175 44.6
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 7.3e-21 104.8 191 44.0
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 9.6e-21 104.4 176 44.3
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 1.3e-20 104.0 123 54.5
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 2.1e-20 103.2 163 44.2
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 2.1e-20 103.2 112 52.7
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 2.8e-20 102.8 92 59.8
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 2.8e-20 102.8 157 45.9
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.8e-20 102.1 122 50.0
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 4.8e-20 102.1 116 50.9
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 8.1e-20 101.3 184 41.3
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 1.4e-19 100.5 128 47.7
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 1.8e-19 100.1 137 49.6
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 2.4e-19 99.8 115 50.4
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 3.1e-19 99.4 155 43.2
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 4.0e-19 99.0 137 48.9
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 5.3e-19 98.6 185 41.6
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 6.9e-19 98.2 78 64.1
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 9.0e-19 97.8 85 62.4
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.5e-18 97.1 152 42.8
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.5e-18 97.1 139 46.8
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 2.0e-18 96.7 93 58.1
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 3.4e-18 95.9 151 43.7
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 1.7e-17 93.6 80 61.2
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 2.2e-17 93.2 156 42.3
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 4.9e-17 92.0 104 50.0
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 6.4e-17 91.7 176 39.2
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 1.1e-16 90.9 134 44.0
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 1.9e-16 90.1 120 46.7
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 2.4e-16 89.7 67 65.7
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 1.6e-15 87.0 111 47.7
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 2.1e-15 86.7 132 40.9
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 2.1e-15 86.7 71 57.7
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 2.7e-15 86.3 111 47.7
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.7e-15 86.3 111 49.5
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 6.0e-15 85.1 133 44.4
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 1.3e-14 84.0 152 40.1
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 1.8e-14 83.6 52 78.8
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 3.0e-14 82.8 67 67.2
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 6.7e-14 81.6 97 55.7
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 1.9e-13 80.1 138 42.0
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 4.3e-13 79.0 123 43.1
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 4.3e-13 79.0 79 54.4
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 4.3e-13 79.0 71 57.7
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 1.3e-12 77.4 111 44.1
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 2.8e-12 76.3 123 42.3
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 4.8e-12 75.5 53 69.8
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 4.8e-12 75.5 123 41.5
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 1.1e-11 74.3 166 35.5
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 2.0e-10 70.1 120 39.2
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 2.9e-09 66.2 113 38.9
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 3.8e-09 65.9 68 58.8
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 6.4e-09 65.1 47 61.7
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 1.4e-08 63.9 114 40.4
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 4.2e-08 62.4 93 44.1
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.2e-08 62.4 93 44.1
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 5.5e-08 62.0 91 45.1
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 5.5e-08 62.0 91 45.1


User provided reference genes

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