Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04637 Striga asiatica HOM05D000988 ORTHO05D000724 4.1e-125 451.4 232 100.0
SGA_v2.0_scaffold1G00752 Striga asiatica HOM05D000988 ORTHO05D000724 2.3e-35 153.3 156 60.9
Migut.D00535 Erythranthe guttata HOM05D000988 ORTHO05D000724 7.9e-28 128.3 154 53.2
MSTRG.21420 Avicennia marina HOM05D000988 ORTHO05D000724 1.4e-21 107.5 149 49.0
GSVIVG01028640001 Vitis vinifera HOM05D000988 ORTHO05D000724 1.1e-16 91.3 145 45.5
Hma1.2p1_0226F.1_g095740 Hydrangea macrophylla HOM05D000988 ORTHO05D000724 6.9e-16 88.6 151 43.7
Dinv19206 Davidia involucrata HOM05D000988 ORTHO05D000724 3.4e-15 86.3 161 40.4
Gorai.006G221800 Gossypium raimondii HOM05D000988 ORTHO05D000724 5.9e-15 85.5 171 40.4
Cpa.g.sc494.3 Carica papaya HOM05D000988 ORTHO05D000724 7.7e-15 85.1 156 42.3
TAR365G0156 Trochodendron aralioides HOM05D000988 ORTHO05D000724 1.0e-14 84.7 156 44.9
Cc01_g17050 Coffea canephora HOM05D000988 ORTHO05D000724 2.2e-14 83.6 165 41.2
Gohir.A09G204600 Gossypium hirsutum HOM05D000988 ORTHO05D000724 3.8e-14 82.8 177 39.5
MSTRG.18390 Avicennia marina HOM05D000988 ORTHO05D000724 6.5e-14 82.0 157 46.5
TWI53G0755 Tripterygium wilfordii HOM05D000988 ORTHO05D000724 6.5e-14 82.0 152 44.1
Gohir.D05G316900 Gossypium hirsutum HOM05D000988 ORTHO05D000724 8.5e-14 81.6 168 41.7
MD04G1005800 Malus domestica HOM05D000988 ORTHO05D000724 8.5e-14 81.6 160 41.9
TAR636G2975 Trochodendron aralioides HOM05D000988 ORTHO05D000724 8.5e-14 81.6 159 43.4
Gohir.D09G198200 Gossypium hirsutum HOM05D000988 ORTHO05D000724 1.4e-13 80.9 171 39.8
Thecc.04G205600 Theobroma cacao HOM05D000988 ORTHO05D000724 1.4e-13 80.9 73 64.4
Atru.chr4.1721 Acer truncatum HOM05D000988 ORTHO05D000724 1.9e-13 80.5 67 67.2
ClCG06G007690 Citrullus lanatus HOM05D000988 ORTHO05D000724 2.5e-13 80.1 173 37.0
Gorai.009G339200 Gossypium raimondii HOM05D000988 ORTHO05D000724 2.5e-13 80.1 168 41.1
Gorai.006G221900 Gossypium raimondii HOM05D000988 ORTHO05D000724 3.2e-13 79.7 177 38.4
RcHm_v2.0_Chr6g0284901 Rosa chinensis HOM05D000988 ORTHO05D000724 3.2e-13 79.7 151 41.7
Gohir.A09G204500 Gossypium hirsutum HOM05D000988 ORTHO05D000724 4.2e-13 79.3 171 39.8
MELO3C020458.2 Cucumis melo HOM05D000988 ORTHO05D000724 5.5e-13 79.0 184 38.6
Dinv04651 Davidia involucrata HOM05D000988 ORTHO05D000724 7.2e-13 78.6 233 31.8
Dinv38246 Davidia involucrata HOM05D000988 ORTHO05D000724 7.2e-13 78.6 164 43.9
Oeu004061.1 Olea europaea HOM05D000988 ORTHO05D000724 7.2e-13 78.6 168 41.1
CSS0039793 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 9.4e-13 78.2 156 39.7
COL.COLO4_10276 Corchorus olitorius HOM05D000988 ORTHO05D000724 9.4e-13 78.2 179 43.0
Hma1.2p1_0351F.1_g132960 Hydrangea macrophylla HOM05D000988 ORTHO05D000724 9.4e-13 78.2 175 34.9
Duzib212G0689 Durio zibethinus HOM05D000988 ORTHO05D000724 1.2e-12 77.8 174 37.9
Gohir.D09G198300 Gossypium hirsutum HOM05D000988 ORTHO05D000724 1.6e-12 77.4 177 37.9
Gohir.A05G316301 Gossypium hirsutum HOM05D000988 ORTHO05D000724 2.1e-12 77.0 165 43.6
Cpa.g.sc8.159 Carica papaya HOM05D000988 ORTHO05D000724 4.7e-12 75.9 187 40.1
CiPaw.02G066900 Carya illinoinensis HOM05D000988 ORTHO05D000724 4.7e-12 75.9 107 49.5
CsaV3_2G011460 Cucumis sativus L. HOM05D000988 ORTHO05D000724 4.7e-12 75.9 172 39.0
Manes.12G045650 Manihot esculenta HOM05D000988 ORTHO05D000724 4.7e-12 75.9 152 44.7
Nn3g19961 Nelumbo nucifera HOM05D000988 ORTHO05D000724 6.1e-12 75.5 167 37.1
Dinv29587 Davidia involucrata HOM05D000988 ORTHO05D000724 7.9e-12 75.1 169 42.6
Migut.N02269 Erythranthe guttata HOM05D000988 ORTHO05D000724 7.9e-12 75.1 149 41.6
HanXRQChr04g0110791 Helianthus annuus HOM05D000988 ORTHO05D000724 7.9e-12 75.1 78 57.7
Cc01_g17060 Coffea canephora HOM05D000988 ORTHO05D000724 1.0e-11 74.7 156 41.7
Duzib268G0174 Durio zibethinus HOM05D000988 ORTHO05D000724 1.0e-11 74.7 178 39.3
Nn1g07848 Nelumbo nucifera HOM05D000988 ORTHO05D000724 1.0e-11 74.7 180 36.7
Sed0009968 Sechium edule HOM05D000988 ORTHO05D000724 1.0e-11 74.7 164 37.2
Actinidia11410 Actinidia chinensis HOM05D000988 ORTHO05D000724 1.8e-11 73.9 148 37.2
Rhsim02G0056600 Rhododendron simsii HOM05D000988 ORTHO05D000724 2.3e-11 73.6 154 40.3
MSTRG.17553 Avicennia marina HOM05D000988 ORTHO05D000724 3.0e-11 73.2 103 52.4
MELO3C006317.2 Cucumis melo HOM05D000988 ORTHO05D000724 3.0e-11 73.2 70 64.3
CsaV3_3G011030 Cucumis sativus L. HOM05D000988 ORTHO05D000724 3.0e-11 73.2 70 62.9
FAN22G1618 Fragaria x ananassa HOM05D000988 ORTHO05D000724 3.0e-11 73.2 146 42.5
Lj2A1131T40 Lonicera japonica HOM05D000988 ORTHO05D000724 3.0e-11 73.2 154 40.9
Hund18378 Selenicereus undatus HOM05D000988 ORTHO05D000724 3.0e-11 73.2 156 39.1
CiPaw.01G122400 Carya illinoinensis HOM05D000988 ORTHO05D000724 3.9e-11 72.8 179 40.2
CDE05G3224 Ceratophyllum demersum HOM05D000988 ORTHO05D000724 3.9e-11 72.8 63 61.9
Nitab4.5_0000045g0150 Nicotiana tabacum HOM05D000988 ORTHO05D000724 3.9e-11 72.8 150 42.0
vmacro15522 Vaccinium macrocarpon HOM05D000988 ORTHO05D000724 5.1e-11 72.4 161 37.9
CANSAT78G1049 Cannabis sativa HOM05D000988 ORTHO05D000724 8.8e-11 71.6 72 56.9
MSTRG.18391 Avicennia marina HOM05D000988 ORTHO05D000724 1.1e-10 71.2 66 65.2
FvH4_2g19080 Fragaria vesca HOM05D000988 ORTHO05D000724 1.1e-10 71.2 156 40.4
Lsat_1_v5_gn_8_90001 Lactuca sativa HOM05D000988 ORTHO05D000724 1.1e-10 71.2 170 38.8
vmacro02755 Vaccinium macrocarpon HOM05D000988 ORTHO05D000724 1.5e-10 70.9 163 39.3
DCAR_012640 Daucus carota HOM05D000988 ORTHO05D000724 2.0e-10 70.5 151 39.7
Actinidia35872 Actinidia chinensis HOM05D000988 ORTHO05D000724 2.6e-10 70.1 68 58.8
CSS0020824 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 2.6e-10 70.1 157 36.9
CSS0048702 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 2.6e-10 70.1 160 38.8
ECA236G4283 Erigeron canadensis HOM05D000988 ORTHO05D000724 2.6e-10 70.1 160 41.2
VMungo0720G1882 Vigna mungo HOM05D000988 ORTHO05D000724 2.6e-10 70.1 151 39.1
GSVIVG01021078001 Vitis vinifera HOM05D000988 ORTHO05D000724 2.6e-10 70.1 149 38.9
Phvul.L002172 Phaseolus vulgaris HOM05D000988 ORTHO05D000724 3.3e-10 69.7 153 37.9
ClCG05G003380 Citrullus lanatus HOM05D000988 ORTHO05D000724 4.4e-10 69.3 82 52.4
Prupe.8G203300 Prunus persica HOM05D000988 ORTHO05D000724 5.7e-10 68.9 178 39.3
Sc24g0003570 Simmondsia chinensis HOM05D000988 ORTHO05D000724 7.4e-10 68.6 147 40.8
Lsat_1_v5_gn_5_179460 Lactuca sativa HOM05D000988 ORTHO05D000724 9.7e-10 68.2 154 34.4
Cfa002567 Carpinus fangiana HOM05D000988 ORTHO05D000724 1.3e-09 67.8 150 39.3
Glyma.20G198800 Glycine max HOM05D000988 ORTHO05D000724 1.3e-09 67.8 149 36.9
TWI09G1046 Tripterygium wilfordii HOM05D000988 ORTHO05D000724 1.3e-09 67.8 149 40.3
EL10Ac7g17832 Beta vulgaris HOM05D000988 ORTHO05D000724 1.7e-09 67.4 153 36.6
HanXRQChr06g0172031 Helianthus annuus HOM05D000988 ORTHO05D000724 1.7e-09 67.4 153 41.2
FAN12G3787 Fragaria x ananassa HOM05D000988 ORTHO05D000724 2.2e-09 67.0 66 62.1
Nitab4.5_0003312g0070 Nicotiana tabacum HOM05D000988 ORTHO05D000724 2.2e-09 67.0 152 40.1
Eucgr.H00066 Eucalyptus grandis HOM05D000988 ORTHO05D000724 3.7e-09 66.2 194 36.1
Peaxi162Scf00107g01914 Petunia axillaris HOM05D000988 ORTHO05D000724 3.7e-09 66.2 144 38.9
Sc13g0000110 Simmondsia chinensis HOM05D000988 ORTHO05D000724 3.7e-09 66.2 185 38.4
Oeu022254.2 Olea europaea HOM05D000988 ORTHO05D000724 4.8e-09 65.9 156 38.5
Actinidia30079 Actinidia chinensis HOM05D000988 ORTHO05D000724 6.3e-09 65.5 146 42.5
Actinidia39963 Actinidia chinensis HOM05D000988 ORTHO05D000724 6.3e-09 65.5 149 36.9
Oeu016719.1 Olea europaea HOM05D000988 ORTHO05D000724 6.3e-09 65.5 156 38.5
Oeu018223.2 Olea europaea HOM05D000988 ORTHO05D000724 6.3e-09 65.5 150 40.7
arahy.Tifrunner.gnm1.ann1.I0BTND Arachis hypogaea HOM05D000988 ORTHO05D000724 8.2e-09 65.1 161 34.8
FAN24G2948 Fragaria x ananassa HOM05D000988 ORTHO05D000724 8.2e-09 65.1 89 49.4
MBI10_g19229_MAGBIO Magnolia biondii HOM05D000988 ORTHO05D000724 8.2e-09 65.1 142 38.0
Rhsim13G0044800 Rhododendron simsii HOM05D000988 ORTHO05D000724 8.2e-09 65.1 157 38.9
Oeu029206.1 Olea europaea HOM05D000988 ORTHO05D000724 1.1e-08 64.7 166 40.4
HPP92_008970 Vanilla planifolia HOM05D000988 ORTHO05D000724 1.1e-08 64.7 178 37.1
A09p04640 Brassica napus HOM05D000988 ORTHO05D000724 1.4e-08 64.3 69 59.4
BraA09t36100Z Brassica rapa HOM05D000988 ORTHO05D000724 1.4e-08 64.3 69 59.4
MD00G1167700 Malus domestica HOM05D000988 ORTHO05D000724 1.4e-08 64.3 154 37.7
CDE08G0445 Ceratophyllum demersum HOM05D000988 ORTHO05D000724 1.8e-08 63.9 144 36.8
Os03g0137800 Oryza sativa ssp. japonica HOM05D000988 ORTHO05D000724 2.4e-08 63.5 75 52.0
THA.LOC104818958 Tarenaya hassleriana HOM05D000988 ORTHO05D000724 2.4e-08 63.5 184 37.5
arahy.Tifrunner.gnm1.ann1.5BK3NQ Arachis hypogaea HOM05D000988 ORTHO05D000724 4.1e-08 62.8 161 34.2
FAN17G2145 Fragaria x ananassa HOM05D000988 ORTHO05D000724 4.1e-08 62.8 145 39.3
TWI18G0513 Tripterygium wilfordii HOM05D000988 ORTHO05D000724 4.1e-08 62.8 77 57.1
MSTRG.12493 Avicennia marina HOM05D000988 ORTHO05D000724 5.3e-08 62.4 147 40.1
BcaB04g19585 Brassica carinata HOM05D000988 ORTHO05D000724 5.3e-08 62.4 156 37.8
Thhalv10004871m.g Eutrema salsugineum HOM05D000988 ORTHO05D000724 7.0e-08 62.0 151 37.7
Manes.03G148700 Manihot esculenta HOM05D000988 ORTHO05D000724 7.0e-08 62.0 170 35.3
Nitab4.5_0000850g0010 Nicotiana tabacum HOM05D000988 ORTHO05D000724 7.0e-08 62.0 166 38.6
Rhsim09G0055300 Rhododendron simsii HOM05D000988 ORTHO05D000724 7.0e-08 62.0 162 37.7
Rhsim09G0055500 Rhododendron simsii HOM05D000988 ORTHO05D000724 7.0e-08 62.0 145 38.6
Lj5g0019622 Lotus japonicus HOM05D000988 ORTHO05D000724 9.1e-08 61.6 217 30.4
Solyc09g061280.4 Solanum lycopersicum HOM05D000988 ORTHO05D000724 9.1e-08 61.6 70 57.1
THA.LOC104821646 Tarenaya hassleriana HOM05D000988 ORTHO05D000724 9.1e-08 61.6 156 39.7
AT5G48820 Arabidopsis thaliana HOM05D000988 ORTHO05D000724 1.2e-07 61.2 161 36.6
Ciclev10005793m.g Citrus clementina HOM05D000988 ORTHO05D000724 1.2e-07 61.2 68 60.3
Eucgr.K02170 Eucalyptus grandis HOM05D000988 ORTHO05D000724 1.5e-07 60.8 172 38.4
HanXRQChr00c0028g0571151 Helianthus annuus HOM05D000988 ORTHO05D000724 1.5e-07 60.8 156 40.4
Sp2g19210 Schrenkiella parvula HOM05D000988 ORTHO05D000724 1.5e-07 60.8 165 38.8
Oeu006727.2 Olea europaea HOM05D000988 ORTHO05D000724 2.0e-07 60.5 157 40.1
TWI75G1674 Tripterygium wilfordii HOM05D000988 ORTHO05D000724 2.0e-07 60.5 66 57.6
Carub.0008s0855 Capsella rubella HOM05D000988 ORTHO05D000724 2.6e-07 60.1 169 36.7
FAN15G2814 Fragaria x ananassa HOM05D000988 ORTHO05D000724 2.6e-07 60.1 157 36.9
Manes.15G052700 Manihot esculenta HOM05D000988 ORTHO05D000724 2.6e-07 60.1 174 37.9
unitig_8.g3758 Utricularia gibba HOM05D000988 ORTHO05D000724 2.6e-07 60.1 156 40.4
Ah.08g214250 Amaranthus hybridus HOM05D000988 ORTHO05D000724 3.4e-07 59.7 152 37.5
Lalb_Chr21g0312561 Lupinus albus HOM05D000988 ORTHO05D000724 4.5e-07 59.3 154 35.1
MD10G1164900 Malus domestica HOM05D000988 ORTHO05D000724 4.5e-07 59.3 82 50.0
Nitab4.5_0000676g0240 Nicotiana tabacum HOM05D000988 ORTHO05D000724 4.5e-07 59.3 168 37.5
PSO170G2101 Papaver somniferum HOM05D000988 ORTHO05D000724 5.9e-07 58.9 161 36.6
TPR.G9039 Trifolium pratense HOM05D000988 ORTHO05D000724 5.9e-07 58.9 152 36.2
AL8G21990 Arabidopsis lyrata HOM05D000988 ORTHO05D000724 7.7e-07 58.5 159 37.1
Medtr7g057920 Medicago truncatula HOM05D000988 ORTHO05D000724 7.7e-07 58.5 151 36.4
PSO764G0003 Papaver somniferum HOM05D000988 ORTHO05D000724 7.7e-07 58.5 157 37.6
Prupe.1G006300 Prunus persica HOM05D000988 ORTHO05D000724 7.7e-07 58.5 161 37.3
Sabra16G0198500 Salix brachista HOM05D000988 ORTHO05D000724 7.7e-07 58.5 154 36.4
Thecc.01G226300 Theobroma cacao HOM05D000988 ORTHO05D000724 7.7e-07 58.5 160 36.9
VMungo1383G2984 Vigna mungo HOM05D000988 ORTHO05D000724 7.7e-07 58.5 147 38.1
arahy.Tifrunner.gnm1.ann1.KKEJ8Y Arachis hypogaea HOM05D000988 ORTHO05D000724 1.0e-06 58.2 151 37.7
RcHm_v2.0_Chr4g0386031 Rosa chinensis HOM05D000988 ORTHO05D000724 1.3e-06 57.8 146 41.1
Zm00001eb221920 Zea mays HOM05D000988 ORTHO05D000724 1.3e-06 57.8 100 42.0
Zm00001eb402760 Zea mays HOM05D000988 ORTHO05D000724 1.3e-06 57.8 66 53.0
Aa31LG5G4360 Aethionema arabicum HOM05D000988 ORTHO05D000724 1.7e-06 57.4 82 51.2
arahy.Tifrunner.gnm1.ann1.VMPA50 Arachis hypogaea HOM05D000988 ORTHO05D000724 1.7e-06 57.4 151 37.1
CDE02G3557 Ceratophyllum demersum HOM05D000988 ORTHO05D000724 1.7e-06 57.4 62 51.6
vmacro00483 Vaccinium macrocarpon HOM05D000988 ORTHO05D000724 1.7e-06 57.4 171 38.0
BcaC04g23761 Brassica carinata HOM05D000988 ORTHO05D000724 2.2e-06 57.0 69 56.5
C09p04950 Brassica napus HOM05D000988 ORTHO05D000724 2.2e-06 57.0 69 56.5
BolC9t53423H Brassica oleracea HOM05D000988 ORTHO05D000724 2.2e-06 57.0 69 56.5
Ca_07515_v3 Cicer arietinum L. HOM05D000988 ORTHO05D000724 2.2e-06 57.0 151 37.7
Haze_11598 Corylus avellana HOM05D000988 ORTHO05D000724 2.2e-06 57.0 146 37.7
FAN27G0446 Fragaria x ananassa HOM05D000988 ORTHO05D000724 2.2e-06 57.0 157 36.9
PGSC0003DMG400017654 Solanum tuberosum HOM05D000988 ORTHO05D000724 2.2e-06 57.0 68 57.4
Zm00001eb003110 Zea mays HOM05D000988 ORTHO05D000724 2.2e-06 57.0 91 45.1
Sabra17G0046000 Salix brachista HOM05D000988 ORTHO05D000724 2.9e-06 56.6 155 36.8
TWI36G1195 Tripterygium wilfordii HOM05D000988 ORTHO05D000724 2.9e-06 56.6 208 32.2
FvH4_4g00660 Fragaria vesca HOM05D000988 ORTHO05D000724 3.8e-06 56.2 144 38.9
FAN12G2720 Fragaria x ananassa HOM05D000988 ORTHO05D000724 3.8e-06 56.2 144 38.9
Sabra17G0041000 Salix brachista HOM05D000988 ORTHO05D000724 3.8e-06 56.2 155 36.8
Zm00001eb046080 Zea mays HOM05D000988 ORTHO05D000724 3.8e-06 56.2 65 49.2
C03p21320 Brassica napus HOM05D000988 ORTHO05D000724 5.0e-06 55.8 76 53.9
Peaxi162Scf00047g00631 Petunia axillaris HOM05D000988 ORTHO05D000724 5.0e-06 55.8 63 57.1
Phvul.008G125600 Phaseolus vulgaris HOM05D000988 ORTHO05D000724 5.0e-06 55.8 147 38.8
Solyc12g098310.2 Solanum lycopersicum HOM05D000988 ORTHO05D000724 5.0e-06 55.8 70 57.1
PGSC0003DMG400007708 Solanum tuberosum HOM05D000988 ORTHO05D000724 5.0e-06 55.8 70 58.6
THA.LOC104804608 Tarenaya hassleriana HOM05D000988 ORTHO05D000724 5.0e-06 55.8 156 39.7
HPP92_005399 Vanilla planifolia HOM05D000988 ORTHO05D000724 5.0e-06 55.8 172 33.1
CARHR182920 Cardamine hirsuta HOM05D000988 ORTHO05D000724 6.5e-06 55.5 149 38.3
Ca_09789_v3 Cicer arietinum L. HOM05D000988 ORTHO05D000724 6.5e-06 55.5 113 37.2
MD10G1164800 Malus domestica HOM05D000988 ORTHO05D000724 6.5e-06 55.5 132 37.9
Sed0008023 Sechium edule HOM05D000988 ORTHO05D000724 6.5e-06 55.5 142 37.3
TPR.G9034 Trifolium pratense HOM05D000988 ORTHO05D000724 6.5e-06 55.5 151 35.1


User provided reference genes

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