Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04627 Striga asiatica HOM05D009248 ORTHO05D011411 2.6e-109 398.7 194 100.0
Eucgr.H04911 Eucalyptus grandis HOM05D009248 ORTHO05D011411 2.2e-39 166.4 138 63.0
HPP92_006102 Vanilla planifolia HOM05D009248 ORTHO05D011411 4.3e-35 152.1 145 56.6
Os06g0131001 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 2.6e-32 142.9 147 56.5
Zm00001eb376140 Zea mays HOM05D009248 ORTHO05D011411 2.2e-31 139.8 148 57.4
Zm00001eb271250 Zea mays HOM05D009248 ORTHO05D011411 7.1e-30 134.8 137 59.1
Zm00001eb181730 Zea mays HOM05D009248 ORTHO05D011411 3.0e-28 129.4 133 57.9
Os06g0160000 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 1.5e-27 127.1 138 56.5
Cpa.g.sc55.60 Carica papaya HOM05D009248 ORTHO05D011411 1.6e-26 123.6 148 49.3
Os11g0155950 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 2.3e-25 119.8 117 59.8
Atru.chr13.1919 Acer truncatum HOM05D009248 ORTHO05D011411 1.5e-24 117.1 144 44.4
Dinv05186 Davidia involucrata HOM05D002878 ORTHO05D003649 5.8e-24 115.2 109 58.7
Lsat_1_v5_gn_6_48640 Lactuca sativa HOM05D002542 ORTHO05D005078 9.9e-24 114.4 140 46.4
Hma1.2p1_0019F.1_g013770 Hydrangea macrophylla HOM05D009248 ORTHO05D011411 2.4e-22 109.8 141 43.3
FAN11G2848 Fragaria x ananassa HOM05D009248 ORTHO05D011411 7.1e-22 108.2 105 57.1
Dinv36294 Davidia involucrata HOM05D009248 ORTHO05D011411 2.7e-21 106.3 103 51.5
SGA_v2.0_scaffold326G48753 Striga asiatica HOM05D009248 ORTHO05D011411 3.5e-21 105.9 96 53.1
Ciclev10030158m.g Citrus clementina HOM05D009248 ORTHO05D011411 6.0e-21 105.1 105 49.5
Ciclev10003105m.g Citrus clementina HOM05D009248 ORTHO05D011411 1.3e-20 104.0 102 49.0
arahy.Tifrunner.gnm1.ann1.RU7JNP Arachis hypogaea HOM05D009248 ORTHO05D011411 3.9e-20 102.4 115 50.4
DCAR_004036 Daucus carota HOM05D009248 ORTHO05D011411 5.6e-19 98.6 108 50.9
BolC2t06434H Brassica oleracea HOM05D004194 ORTHO05D005641 7.3e-19 98.2 111 47.7
Hma1.2p1_0237F.1_g099550 Hydrangea macrophylla HOM05D009248 ORTHO05D011411 6.2e-18 95.1 115 51.3
SEGI_24703 Sequoiadendron giganteum HOM05D009248 ORTHO05D011411 1.4e-17 94.0 117 49.6
EL10Ac4g08271 Beta vulgaris HOM05D000288 ORTHO05D000173 4.9e-15 85.5 87 47.1
Os03g0390633 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 1.6e-13 80.5 93 51.6
Os04g0450825 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 6.0e-13 78.6 91 50.5
Actinidia21566 Actinidia chinensis HOM05D009248 ORTHO05D011411 1.5e-11 73.9 105 47.6
Nn3g18111 Nelumbo nucifera HOM05D009248 ORTHO05D011411 2.5e-11 73.2 144 38.2
Thecc.05G224900 Theobroma cacao HOM05D009248 ORTHO05D011411 3.3e-11 72.8 82 40.2
Os02g0457175 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 1.1e-09 67.8 57 59.6
Os02g0457325 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 2.4e-09 66.6 57 59.6
Eucgr.H04906 Eucalyptus grandis HOM05D009248 ORTHO05D011411 2.0e-08 63.5 44 65.9
Oeu022030.2 Olea europaea HOM05D009248 ORTHO05D011411 1.7e-07 60.5 59 52.5


User provided reference genes

Program Settings