Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 5.9e-166 587.4 287 100.0
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 3.2e-111 405.6 254 74.4
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 2.7e-110 402.5 249 77.5
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 2.6e-105 386.0 247 73.7
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 4.4e-105 385.2 247 73.7
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 4.2e-95 352.1 257 64.6
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 3.5e-94 349.0 223 73.5
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 6.0e-94 348.2 249 67.1
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 1.3e-93 347.1 248 67.3
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.7e-93 346.7 223 73.5
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 2.3e-93 346.3 246 68.7
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 2.3e-93 346.3 260 64.2
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 3.9e-93 345.5 214 74.3
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 3.9e-93 345.5 250 66.4
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 3.9e-93 345.5 233 73.0
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 6.6e-93 344.7 251 65.3
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 8.7e-93 344.4 256 64.1
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 8.7e-93 344.4 249 65.5
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 8.7e-93 344.4 222 73.0
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 3.3e-92 342.4 220 73.2
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 4.3e-92 342.0 222 72.1
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 5.6e-92 341.7 248 66.1
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 5.6e-92 341.7 220 73.6
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 7.3e-92 341.3 249 65.9
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 7.3e-92 341.3 225 69.8
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 7.3e-92 341.3 250 66.0
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 7.3e-92 341.3 222 71.6
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 9.6e-92 340.9 253 65.2
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 1.3e-91 340.5 249 66.3
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 1.6e-91 340.1 222 72.1
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 1.6e-91 340.1 248 66.1
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 2.8e-91 339.3 251 66.1
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 3.6e-91 339.0 251 66.1
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 4.8e-91 338.6 248 64.5
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 6.2e-91 338.2 233 68.7
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 8.1e-91 337.8 223 69.5
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 1.4e-90 337.0 248 64.9
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 1.8e-90 336.7 250 65.2
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 4.0e-90 335.5 219 73.1
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 6.9e-90 334.7 243 66.7
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 6.9e-90 334.7 247 65.6
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 1.2e-89 334.0 212 74.1
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 1.5e-89 333.6 217 72.8
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 2.0e-89 333.2 221 74.2
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 2.6e-89 332.8 217 73.3
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 2.6e-89 332.8 220 69.1
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 3.4e-89 332.4 226 70.8
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 5.8e-89 331.6 219 71.7
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 5.8e-89 331.6 251 64.9
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 9.9e-89 330.9 217 74.2
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 1.7e-88 330.1 223 71.7
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.7e-88 330.1 223 71.7
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 2.9e-88 329.3 235 66.4
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 2.9e-88 329.3 217 74.7
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 3.8e-88 328.9 211 73.0
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 3.8e-88 328.9 253 63.2
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 4.9e-88 328.6 226 70.8
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 4.9e-88 328.6 252 65.1
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 6.4e-88 328.2 211 73.9
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 8.4e-88 327.8 255 64.3
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 1.4e-87 327.0 217 71.4
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 1.4e-87 327.0 217 70.5
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 1.4e-87 327.0 216 71.3
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.9e-87 326.6 228 69.7
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.9e-87 326.6 220 70.0
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 2.4e-87 326.2 214 74.3
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 2.4e-87 326.2 217 71.0
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 2.4e-87 326.2 225 68.9
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 3.2e-87 325.9 244 64.3
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 4.2e-87 325.5 259 61.8
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 5.4e-87 325.1 217 70.0
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 9.3e-87 324.3 249 64.3
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 1.2e-86 323.9 225 68.9
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 2.7e-86 322.8 214 72.0
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.7e-86 322.8 223 70.9
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.5e-86 322.4 211 70.6
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 4.6e-86 322.0 243 65.0
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 4.6e-86 322.0 259 61.4
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 6.0e-86 321.6 225 68.0
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 6.0e-86 321.6 251 61.8
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 3.0e-85 319.3 222 68.9
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 1.5e-84 317.0 228 68.9
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.9e-84 316.6 225 66.7
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 5.6e-84 315.1 243 63.4
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 5.6e-84 315.1 216 71.3
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 6.2e-83 311.6 216 70.4
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 1.1e-82 310.8 242 64.9
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 2.4e-82 309.7 216 69.0
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 3.1e-82 309.3 216 70.4
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 1.2e-81 307.4 219 68.5
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 1.2e-81 307.4 252 61.5
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 1.2e-81 307.4 239 61.9
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.5e-81 307.0 211 67.8
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 2.0e-81 306.6 252 61.1
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 2.6e-81 306.2 242 62.4
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 2.6e-81 306.2 219 68.0
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 2.6e-81 306.2 219 68.0
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 2.6e-81 306.2 242 62.4
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 2.6e-81 306.2 219 68.0
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 2.6e-81 306.2 242 62.4
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 3.4e-81 305.8 224 67.4
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.3e-80 303.9 211 66.8
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 1.3e-80 303.9 235 61.3
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 6.4e-80 301.6 224 66.5
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 6.4e-80 301.6 228 62.7
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 5.5e-79 298.5 214 66.4
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 5.5e-79 298.5 216 69.0
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 1.3e-75 287.3 216 63.4
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 3.7e-75 285.8 211 62.1
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 3.7e-75 285.8 214 62.6
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 6.2e-75 285.0 211 64.0
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 1.8e-74 283.5 210 62.4
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 3.1e-74 282.7 209 65.6
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 5.3e-74 282.0 223 60.1
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 6.9e-74 281.6 183 70.5
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 5.5e-71 271.9 213 60.6
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 2.7e-70 269.6 226 60.6
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 1.3e-67 260.8 243 55.6
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 1.3e-59 234.2 186 61.3
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 1.2e-54 217.6 172 63.4
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 1.1e-44 184.5 215 44.7
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 4.5e-41 172.6 178 52.2
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 1.5e-39 167.5 144 57.6
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 5.5e-39 165.6 132 60.6
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 1.6e-33 147.5 167 47.3
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 5.5e-31 139.0 191 43.5
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 4.7e-30 136.0 104 62.5
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 2.6e-28 130.2 100 63.0
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 5.2e-13 79.3 48 72.9
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 5.4e-10 69.3 46 63.0


User provided reference genes

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