Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04541 Striga asiatica HOM05D006179 ORTHO05D008370 3.6e-174 614.8 304 100.0
Migut.D00669 Erythranthe guttata HOM05D006179 ORTHO05D008370 1.0e-123 447.2 312 75.6
Oeu061700.1 Olea europaea HOM05D006179 ORTHO05D008370 1.4e-120 436.8 305 73.1
SalBow6G4024 Salvia bowleyana HOM05D006179 ORTHO05D008370 3.1e-117 425.6 304 72.0
Nitab4.5_0001290g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 4.8e-110 401.7 227 83.7
Potri.009G069300 Populus trichocarpa HOM05D006179 ORTHO05D008370 6.6e-107 391.3 306 68.3
PGSC0003DMG401004716 Solanum tuberosum HOM05D006179 ORTHO05D008370 1.5e-106 390.2 226 83.2
Sopen12g034430 Solanum pennellii HOM05D006179 ORTHO05D008370 1.2e-105 387.1 226 82.3
Solyc12g099800.2 Solanum lycopersicum HOM05D006179 ORTHO05D008370 3.6e-105 385.6 226 81.4
GSVIVG01037292001 Vitis vinifera HOM05D006179 ORTHO05D008370 6.1e-105 384.8 305 68.2
Cfa009884 Carpinus fangiana HOM05D006179 ORTHO05D008370 1.0e-104 384.0 305 66.9
MD11G1184200 Malus domestica HOM05D006179 ORTHO05D008370 1.8e-104 383.3 307 67.4
CSS0020940 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 5.2e-104 381.7 307 67.1
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla HOM05D006179 ORTHO05D008370 8.9e-104 380.9 227 78.9
CiPaw.14G111900 Carya illinoinensis HOM05D006179 ORTHO05D008370 2.6e-103 379.4 225 81.8
Cc00_g17410 Coffea canephora HOM05D006179 ORTHO05D008370 2.6e-103 379.4 229 80.3
COL.COLO4_24491 Corchorus olitorius HOM05D006179 ORTHO05D008370 4.4e-103 378.6 311 66.2
RcHm_v2.0_Chr5g0050451 Rosa chinensis HOM05D006179 ORTHO05D008370 5.7e-103 378.3 230 80.4
unitig_62.g23875 Utricularia gibba HOM05D006179 ORTHO05D008370 5.7e-103 378.3 223 82.1
PGR119G2402 Punica granatum HOM05D006179 ORTHO05D008370 1.3e-102 377.1 320 64.7
Gohir.A07G121100 Gossypium hirsutum HOM05D006179 ORTHO05D008370 1.7e-102 376.7 232 78.0
QL01p016926 Quercus lobata HOM05D006179 ORTHO05D008370 1.7e-102 376.7 224 80.4
vmacro14276 Vaccinium macrocarpon HOM05D006179 ORTHO05D008370 1.7e-102 376.7 288 66.7
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea HOM05D006179 ORTHO05D008370 2.2e-102 376.3 226 78.3
EL10Ac4g10106 Beta vulgaris HOM05D006179 ORTHO05D008370 2.2e-102 376.3 242 74.8
FvH4_3g27810 Fragaria vesca HOM05D006179 ORTHO05D008370 2.2e-102 376.3 230 80.4
TPR.G16411 Trifolium pratense HOM05D006179 ORTHO05D008370 2.2e-102 376.3 281 67.6
LjContig00564g0004002 Lotus japonicus HOM05D006179 ORTHO05D008370 2.8e-102 375.9 228 78.5
Gohir.D07G125300 Gossypium hirsutum HOM05D006179 ORTHO05D008370 3.7e-102 375.6 232 77.6
Glyma.02G279000 Glycine max HOM05D006179 ORTHO05D008370 4.9e-102 375.2 229 79.0
Glyma.14G035700 Glycine max HOM05D006179 ORTHO05D008370 4.9e-102 375.2 229 79.5
Rhsim01G0195300 Rhododendron simsii HOM05D006179 ORTHO05D008370 6.3e-102 374.8 246 73.6
Atru.chr3.2957 Acer truncatum HOM05D006179 ORTHO05D008370 8.3e-102 374.4 234 76.5
FAN25G1664 Fragaria x ananassa HOM05D006179 ORTHO05D008370 1.4e-101 373.6 225 81.3
AUR62000204 Chenopodium quinoa HOM05D006179 ORTHO05D008370 9.2e-101 370.9 232 76.3
Psat2g020720 Pisum sativum HOM05D006179 ORTHO05D008370 9.2e-101 370.9 258 72.5
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea HOM05D006179 ORTHO05D008370 1.2e-100 370.5 232 76.7
CANSAT54G1770 Cannabis sativa HOM05D006179 ORTHO05D008370 1.6e-100 370.2 306 63.1
CAN.G1305.17 Capsicum annuum HOM05D006179 ORTHO05D008370 2.0e-100 369.8 238 76.5
Lj2C622G16 Lonicera japonica HOM05D006179 ORTHO05D008370 3.5e-100 369.0 265 69.8
Lalb_Chr04g0249261 Lupinus albus HOM05D006179 ORTHO05D008370 5.9e-100 368.2 225 77.8
Prupe.4G263800 Prunus persica HOM05D006179 ORTHO05D008370 5.9e-100 368.2 232 78.0
VMungo0647G1137 Vigna mungo HOM05D006179 ORTHO05D008370 7.8e-100 367.9 238 76.1
Hund21973 Selenicereus undatus HOM05D006179 ORTHO05D008370 1.0e-99 367.5 241 73.0
Sed0005347 Sechium edule HOM05D006179 ORTHO05D008370 1.3e-99 367.1 232 76.3
Nn2g14782 Nelumbo nucifera HOM05D006179 ORTHO05D008370 1.7e-99 366.7 307 63.8
ClCG02G022800 Citrullus lanatus HOM05D006179 ORTHO05D008370 2.3e-99 366.3 305 65.2
Phvul.008G201800 Phaseolus vulgaris HOM05D006179 ORTHO05D008370 3.9e-99 365.5 228 76.8
HanXRQChr13g0390131 Helianthus annuus HOM05D006179 ORTHO05D008370 1.1e-98 364.0 227 74.9
Medtr5g089330 Medicago truncatula HOM05D006179 ORTHO05D008370 2.5e-98 362.8 228 76.3
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 3.3e-98 362.5 231 75.3
TWI31G1173 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 4.3e-98 362.1 307 63.8
TAR623G0610 Trochodendron aralioides HOM05D006179 ORTHO05D008370 5.6e-98 361.7 226 77.0
Ah.04g159740 Amaranthus hybridus HOM05D006179 ORTHO05D008370 7.3e-98 361.3 218 78.0
Ca_06199_v3 Cicer arietinum L. HOM05D006179 ORTHO05D008370 7.3e-98 361.3 227 76.2
Gorai.001G135100 Gossypium raimondii HOM05D006179 ORTHO05D008370 7.3e-98 361.3 223 77.6
Sc16g0011000 Simmondsia chinensis HOM05D006179 ORTHO05D008370 7.3e-98 361.3 221 77.4
TWI79G0794 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 9.5e-98 360.9 306 63.7
Peaxi162Scf00272g00828 Petunia axillaris HOM05D006179 ORTHO05D008370 1.6e-97 360.1 201 83.6
Sabra09G0052200 Salix brachista HOM05D006179 ORTHO05D008370 6.1e-97 358.2 353 57.2
PSO339G0647 Papaver somniferum HOM05D006179 ORTHO05D008370 1.8e-96 356.7 226 74.8
PSO384G2846 Papaver somniferum HOM05D006179 ORTHO05D008370 5.2e-96 355.1 226 74.3
Cpa.g.sc157.57 Carica papaya HOM05D006179 ORTHO05D008370 6.8e-96 354.8 321 61.1
CDE02G1620 Ceratophyllum demersum HOM05D006179 ORTHO05D008370 3.4e-95 352.4 270 66.3
ATR0621G006 Amborella trichopoda HOM05D006179 ORTHO05D008370 7.5e-95 351.3 232 72.4
Aqoxy1G00395 Aquilegia oxysepala HOM05D006179 ORTHO05D008370 7.5e-95 351.3 221 74.2
Thecc.09G246900 Theobroma cacao HOM05D006179 ORTHO05D008370 1.3e-94 350.5 368 55.7
Haze_23248 Corylus avellana HOM05D006179 ORTHO05D008370 3.7e-94 349.0 269 65.8
TPR.G16393 Trifolium pratense HOM05D006179 ORTHO05D008370 4.6e-92 342.0 287 61.3
Zm00001eb331180 Zea mays HOM05D006179 ORTHO05D008370 4.6e-92 342.0 273 63.7
FAN21G1036 Fragaria x ananassa HOM05D006179 ORTHO05D008370 3.0e-91 339.3 247 72.1
Duzib170G0239 Durio zibethinus HOM05D006179 ORTHO05D008370 3.9e-91 339.0 305 62.3
Nn7g36750 Nelumbo nucifera HOM05D006179 ORTHO05D008370 5.0e-91 338.6 211 75.8
Os07g0687500 Oryza sativa ssp. japonica HOM05D006179 ORTHO05D008370 1.2e-89 334.0 238 69.7
FAN11G2659 Fragaria x ananassa HOM05D000059 ORTHO05D008370 6.2e-89 331.6 203 80.8
Atru.chr3.2952 Acer truncatum HOM05D006179 ORTHO05D008370 2.3e-88 329.7 281 64.4
Nitab4.5_0002310g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 6.8e-88 328.2 234 71.8
THA.LOC104811194 Tarenaya hassleriana HOM05D006179 ORTHO05D008370 9.8e-87 324.3 304 57.6
Lsat_1_v5_gn_5_65341 Lactuca sativa HOM05D006179 ORTHO05D008370 5.4e-85 318.5 221 71.0
DCAR_024400 Daucus carota HOM05D006179 ORTHO05D008370 1.6e-84 317.0 223 70.4
CARHR193590 Cardamine hirsuta HOM05D006179 ORTHO05D008370 2.1e-84 316.6 295 58.0
Sp6g25040 Schrenkiella parvula HOM05D006179 ORTHO05D008370 4.6e-84 315.5 307 58.6
Aa31LG1G8830 Aethionema arabicum HOM05D006179 ORTHO05D008370 6.0e-84 315.1 304 55.9
Thhalv10014227m.g Eutrema salsugineum HOM05D006179 ORTHO05D008370 7.8e-84 314.7 305 56.1
A03p09460 Brassica napus HOM05D006179 ORTHO05D008370 1.3e-83 313.9 234 66.7
BraA03t10264Z Brassica rapa HOM05D006179 ORTHO05D008370 1.3e-83 313.9 234 66.7
C03p11040 Brassica napus HOM05D006179 ORTHO05D008370 2.3e-83 313.2 234 67.5
BolC3t13573H Brassica oleracea HOM05D006179 ORTHO05D008370 2.3e-83 313.2 234 67.5
BcaB01g04864 Brassica carinata HOM05D006179 ORTHO05D008370 8.6e-83 311.2 234 66.2
AL6G30860 Arabidopsis lyrata HOM05D006179 ORTHO05D008370 9.5e-82 307.8 255 62.0
AT5G19370 Arabidopsis thaliana HOM05D006179 ORTHO05D008370 6.2e-81 305.1 277 58.5
HPP92_028459 Vanilla planifolia HOM05D006179 ORTHO05D008370 2.3e-80 303.1 183 76.5
BcaC03g13669 Brassica carinata HOM05D006179 ORTHO05D008370 6.8e-80 301.6 224 67.4
A02p05510 Brassica napus HOM05D006179 ORTHO05D008370 2.0e-79 300.1 301 55.8
Carub.0006s1771 Capsella rubella HOM05D006179 ORTHO05D008370 1.1e-77 294.3 234 63.7
BraA02t05502Z Brassica rapa HOM05D006179 ORTHO05D008370 1.9e-77 293.5 325 52.0
MELO3C014557.2 Cucumis melo HOM05D006179 ORTHO05D008370 2.4e-77 293.1 199 73.4
CsaV3_6G038930 Cucumis sativus L. HOM05D006179 ORTHO05D008370 9.2e-77 291.2 190 76.3
SMO145G0007 Selaginella moellendorffii HOM05D006179 ORTHO05D008370 1.6e-76 290.4 228 63.2
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus HOM05D006179 ORTHO05D008370 1.7e-75 287.0 215 66.5
Mapoly0003s0043 Marchantia polymorpha HOM05D006179 ORTHO05D008370 1.7e-75 287.0 233 60.1
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis HOM05D006179 ORTHO05D008370 6.2e-73 278.5 225 60.4
Pp3c3_13280 Physcomitrium patens HOM05D006179 ORTHO05D008370 5.2e-72 275.4 302 50.0
BcaB01g05143 Brassica carinata HOM05D006179 ORTHO05D008370 1.4e-69 267.3 179 70.9
Eucgr.J00687 Eucalyptus grandis HOM05D006179 ORTHO05D008370 3.2e-69 266.2 151 81.5
CBR_g54969 Chara braunii HOM05D006179 ORTHO05D008370 1.3e-67 260.8 254 53.1
Ciclev10017644m.g Citrus clementina HOM05D006179 ORTHO05D008370 1.3e-67 260.8 151 78.8
Dinv36157 Davidia involucrata HOM05D006179 ORTHO05D008370 9.0e-64 248.1 145 84.8
ECA233G4787 Erigeron canadensis HOM05D006179 ORTHO05D008370 1.2e-60 237.7 146 74.0
Manes.02G138400 Manihot esculenta HOM05D006179 ORTHO05D008370 1.6e-60 237.3 234 61.1
Peaxi162Scf00174g00223 Petunia axillaris HOM05D006179 ORTHO05D008370 8.7e-59 231.5 196 62.2
AUR62040469 Chenopodium quinoa HOM05D006179 ORTHO05D008370 4.8e-57 225.7 185 62.2
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 4.8e-57 225.7 161 71.4
SEGI_16296 Sequoiadendron giganteum HOM05D006179 ORTHO05D008370 2.0e-55 220.3 153 68.6
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 1.6e-49 200.7 140 72.9
AUR62042212 Chenopodium quinoa HOM05D006179 ORTHO05D008370 7.4e-42 175.3 146 62.3
Cre07.g350400 Chlamydomonas reinhardtii HOM05D006179 ORTHO05D008370 3.2e-37 159.8 182 39.6
SalBow6G2129 Salvia bowleyana HOM05D006179 ORTHO05D353266 4.6e-36 156.0 152 60.5
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 1.1e-32 144.8 198 39.4
CSS0040024 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 3.1e-24 116.7 68 83.8
CSS0040434 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 2.2e-17 94.0 137 42.3
MCO16G521 Micromonas commoda HOM05D005637 ORTHO05D006983 1.7e-09 67.8 102 41.2
QL02p019212 Quercus lobata HOM05D006179 ORTHO05D008370 4.8e-09 66.2 36 77.8
Haze_26617 Corylus avellana HOM05D006179 ORTHO05D164269 1.7e-06 57.8 96 37.5
Sc04g0002850 Simmondsia chinensis HOM05D005637 ORTHO05D006983 1.7e-06 57.8 119 31.1


User provided reference genes

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