Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04523 Striga asiatica HOM05D003587 ORTHO05D004139 8.5e-79 297.0 153 100.0
Cc01_g07130 Coffea canephora HOM05D003587 ORTHO05D004139 2.6e-64 248.8 151 80.8
Migut.D00702 Erythranthe guttata HOM05D003587 ORTHO05D004139 3.5e-64 248.4 153 78.4
Dinv35888 Davidia involucrata HOM05D003587 ORTHO05D004139 8.5e-63 243.8 150 80.0
Actinidia07008 Actinidia chinensis HOM05D003587 ORTHO05D004139 3.2e-62 241.9 150 80.0
Cfa010158 Carpinus fangiana HOM05D003587 ORTHO05D004139 7.2e-62 240.7 151 76.8
Sed0023945 Sechium edule HOM05D003587 ORTHO05D004139 7.2e-62 240.7 153 76.5
Haze_23544 Corylus avellana HOM05D003587 ORTHO05D004139 9.4e-62 240.4 151 76.8
GSVIVG01037380001 Vitis vinifera HOM05D003587 ORTHO05D004139 1.2e-61 240.0 150 77.3
QL01p020717 Quercus lobata HOM05D003587 ORTHO05D004139 1.6e-61 239.6 151 78.8
Rhsim13G0203000 Rhododendron simsii HOM05D003587 ORTHO05D004139 1.0e-60 236.9 149 77.9
PGSC0003DMG400027414 Solanum tuberosum HOM05D003587 ORTHO05D004139 1.0e-60 236.9 151 78.1
Solyc11g072170.2 Solanum lycopersicum HOM05D003587 ORTHO05D004139 1.8e-60 236.1 151 79.5
CiPaw.13G146000 Carya illinoinensis HOM05D003587 ORTHO05D004139 2.3e-60 235.7 151 76.2
ClCG03G014310 Citrullus lanatus HOM05D003587 ORTHO05D004139 2.3e-60 235.7 153 75.8
MSTRG.21324 Avicennia marina HOM05D003587 ORTHO05D004139 3.0e-60 235.3 146 79.5
CAN.G1085.3 Capsicum annuum HOM05D003587 ORTHO05D004139 4.0e-60 235.0 151 78.1
vmacro04091 Vaccinium macrocarpon HOM05D003587 ORTHO05D004139 4.0e-60 235.0 149 78.5
Cpa.g.sc34.194 Carica papaya HOM05D003587 ORTHO05D004139 6.7e-60 234.2 146 80.1
SalBow6G4759 Salvia bowleyana HOM05D003587 ORTHO05D004139 1.1e-59 233.4 152 79.6
Ciclev10018028m.g Citrus clementina HOM05D003587 ORTHO05D004139 1.5e-59 233.0 150 78.0
TWI59G0614 Tripterygium wilfordii HOM05D003587 ORTHO05D004139 3.3e-59 231.9 150 78.0
CsaV3_1G041910 Cucumis sativus L. HOM05D003587 ORTHO05D004139 4.4e-59 231.5 153 73.9
Duzib150G0536 Durio zibethinus HOM05D003587 ORTHO05D004139 9.7e-59 230.3 151 74.8
Aqoxy1G00052 Aquilegia oxysepala HOM05D003587 ORTHO05D004139 1.7e-58 229.6 148 75.7
Eucgr.B03764 Eucalyptus grandis HOM05D003587 ORTHO05D004139 3.7e-58 228.4 150 75.3
Potri.001G224950 Populus trichocarpa HOM05D003587 ORTHO05D004139 3.7e-58 228.4 151 73.5
Thecc.09G250900 Theobroma cacao HOM05D003587 ORTHO05D004139 4.8e-58 228.0 154 74.0
COL.COLO4_00327 Corchorus olitorius HOM05D003587 ORTHO05D004139 6.3e-58 227.6 152 76.3
Ah.06g194980 Amaranthus hybridus HOM05D003587 ORTHO05D004139 1.1e-57 226.9 148 75.7
Ca_06175_v3 Cicer arietinum L. HOM05D003587 ORTHO05D004139 1.1e-57 226.9 154 73.4
Manes.02G134100 Manihot esculenta HOM05D003587 ORTHO05D004139 4.1e-57 224.9 148 71.6
Nn2g14595 Nelumbo nucifera HOM05D003587 ORTHO05D004139 4.1e-57 224.9 149 73.2
Sabra16G0133600 Salix brachista HOM05D003587 ORTHO05D004139 5.3e-57 224.6 151 72.2
THA.LOC104811210 Tarenaya hassleriana HOM05D003587 ORTHO05D004139 5.3e-57 224.6 144 76.4
Hma1.2p1_1632F.1_g294660 Hydrangea macrophylla HOM05D003587 ORTHO05D004139 7.0e-57 224.2 141 78.0
MD03G1163300 Malus domestica HOM05D003587 ORTHO05D004139 7.0e-57 224.2 153 73.2
Prupe.4G269300 Prunus persica HOM05D003587 ORTHO05D004139 2.7e-56 222.2 153 71.9
Gorai.006G123700 Gossypium raimondii HOM05D003587 ORTHO05D004139 3.5e-56 221.9 152 74.3
Psat0s2703g0240 Pisum sativum HOM05D003587 ORTHO05D004139 3.5e-56 221.9 154 70.8
HanXRQChr12g0378151 Helianthus annuus HOM05D003587 ORTHO05D004139 4.5e-56 221.5 150 72.7
Medtr5g088730 Medicago truncatula HOM05D003587 ORTHO05D004139 7.7e-56 220.7 154 70.8
Nitab4.5_0002567g0150 Nicotiana tabacum HOM05D003587 ORTHO05D004139 1.3e-55 219.9 166 68.7
AUR62006588 Chenopodium quinoa HOM05D003587 ORTHO05D004139 1.7e-55 219.5 146 72.6
CANSAT54G0304 Cannabis sativa HOM05D003587 ORTHO05D004139 2.2e-55 219.2 152 71.1
Nitab4.5_0002161g0020 Nicotiana tabacum HOM05D003587 ORTHO05D004139 3.8e-55 218.4 166 68.1
RcHm_v2.0_Chr5g0050121 Rosa chinensis HOM05D003587 ORTHO05D004139 5.0e-55 218.0 152 71.1
CDE02G1319 Ceratophyllum demersum HOM05D003587 ORTHO05D004139 1.1e-54 216.9 152 71.7
LjContig00564g0003567 Lotus japonicus HOM05D003587 ORTHO05D004139 1.1e-54 216.9 153 71.2
PSO357G0695 Papaver somniferum HOM05D003587 ORTHO05D004139 1.1e-54 216.9 150 71.3
Gohir.A09G109701 Gossypium hirsutum HOM05D003587 ORTHO05D004139 1.9e-54 216.1 151 73.5
EL10Ac4g10057 Beta vulgaris HOM05D003587 ORTHO05D004139 4.2e-54 214.9 148 70.3
AUR62000241 Chenopodium quinoa HOM05D003587 ORTHO05D004139 4.2e-54 214.9 146 70.5
Hund07482 Selenicereus undatus HOM05D003587 ORTHO05D004139 7.2e-54 214.2 148 68.9
Zm00001eb329970 Zea mays HOM05D003587 ORTHO05D004139 2.1e-53 212.6 147 71.4
CARHR193400 Cardamine hirsuta HOM05D003587 ORTHO05D004139 6.1e-53 211.1 150 70.0
Carub.0006s1785 Capsella rubella HOM05D003587 ORTHO05D004139 8.0e-53 210.7 150 69.3
ATR0782G174 Amborella trichopoda HOM05D003587 ORTHO05D004139 1.0e-52 210.3 146 67.8
AL6G31010 Arabidopsis lyrata HOM05D003587 ORTHO05D004139 1.4e-52 209.9 150 70.0
Aa31LG1G8880 Aethionema arabicum HOM05D003587 ORTHO05D004139 2.3e-52 209.1 151 68.9
Sp6g24900 Schrenkiella parvula HOM05D003587 ORTHO05D004139 2.3e-52 209.1 150 70.7
AT5G19500 Arabidopsis thaliana HOM05D003587 ORTHO05D004139 5.2e-52 208.0 144 72.2
FvH4_3g27580 Fragaria vesca HOM05D003587 ORTHO05D004139 5.7e-51 204.5 152 68.4
Thhalv10013310m.g Eutrema salsugineum HOM05D003587 ORTHO05D004139 3.7e-50 201.8 151 66.9
A02p05580 Brassica napus HOM05D003587 ORTHO05D004139 4.8e-50 201.4 149 68.5
BraA02t05510Z Brassica rapa HOM05D003587 ORTHO05D004139 4.8e-50 201.4 149 68.5
BcaB05g23382 Brassica carinata HOM05D003587 ORTHO05D004139 1.1e-49 200.3 150 67.3
BcaC03g13680 Brassica carinata HOM05D003587 ORTHO05D004139 1.8e-49 199.5 149 68.5
BNapus_Darmor_BZH_scaffold_38p02370 Brassica napus HOM05D003587 ORTHO05D004139 1.8e-49 199.5 149 68.5
BolC2t06958H Brassica oleracea HOM05D003587 ORTHO05D004139 1.8e-49 199.5 149 68.5
arahy.Tifrunner.gnm1.ann1.XHSV0C Arachis hypogaea HOM05D003587 ORTHO05D004139 2.7e-48 195.7 148 68.2
Gohir.D09G106200 Gossypium hirsutum HOM05D003587 ORTHO05D004139 3.5e-48 195.3 152 67.8
Mapoly0007s0093 Marchantia polymorpha HOM05D003587 ORTHO05D004139 5.9e-48 194.5 142 68.3
unitig_0.g312 Utricularia gibba HOM05D003587 ORTHO05D004139 1.9e-46 189.5 132 73.5
Sc11g0003600 Simmondsia chinensis HOM05D003587 ORTHO05D004139 5.5e-46 188.0 133 71.4
SMO115G0099 Selaginella moellendorffii HOM05D003587 ORTHO05D004139 7.2e-46 187.6 149 63.1
SEGI_40232 Sequoiadendron giganteum HOM05D003587 ORTHO05D004139 2.1e-45 186.0 139 67.6
SMO115G0193 Selaginella moellendorffii HOM05D003587 ORTHO05D004139 6.1e-45 184.5 146 63.7
Pp3c11_25650 Physcomitrium patens HOM05D003587 ORTHO05D004139 1.3e-42 176.8 142 62.7
HPP92_001660 Vanilla planifolia HOM05D003587 ORTHO05D004139 2.8e-42 175.6 126 68.3
CSS0013509 Camellia sinensis var. sinensis HOM05D003587 ORTHO05D004139 7.0e-41 171.0 150 60.0
Oeu025946.1 Olea europaea HOM05D003587 ORTHO05D004139 2.9e-39 165.6 100 82.0
AagrBONN_evm.TU.Sc2ySwM_344.2860 Anthoceros agrestis HOM05D003587 ORTHO05D004139 4.3e-38 161.8 142 58.5
Lalb_Chr10g0106031 Lupinus albus HOM05D003587 ORTHO05D004139 6.8e-36 154.5 104 69.2
Peaxi162Scf00234g00315 Petunia axillaris HOM05D003587 ORTHO05D004139 4.9e-34 148.3 151 54.3
ECA233G3436 Erigeron canadensis HOM05D003587 ORTHO05D000001 4.1e-33 145.2 91 78.0
Lsat_1_v5_gn_5_64961 Lactuca sativa HOM05D003587 ORTHO05D004139 6.6e-31 137.9 85 81.2
arahy.Tifrunner.gnm1.ann1.Y38JVD Arachis hypogaea HOM05D003587 ORTHO05D004139 1.6e-29 133.3 148 52.0
PRCOL_00002329 Prasinoderma coloniale HOM05D003587 ORTHO05D004139 6.4e-26 121.3 128 49.2
MCO13G640 Micromonas commoda HOM05D003587 ORTHO05D004139 1.2e-21 107.1 148 41.9
Cre13.g572200 Chlamydomonas reinhardtii HOM05D003587 ORTHO05D004139 4.7e-21 105.1 105 51.4
Pp3c10_5160 Physcomitrium patens HOM05D007626 ORTHO05D009633 1.4e-12 77.0 143 32.9
Mapoly0013s0120 Marchantia polymorpha HOM05D007626 ORTHO05D009633 2.3e-12 76.3 149 34.9
AagrBONN_evm.TU.Sc2ySwM_368.520 Anthoceros agrestis HOM05D007626 ORTHO05D009633 8.9e-12 74.3 147 34.7
Pp3c8_8340 Physcomitrium patens HOM05D003587 ORTHO05D004139 1.2e-11 73.9 125 40.0
Actinidia24487 Actinidia chinensis HOM05D003587 ORTHO05D004139 1.5e-11 73.6 86 48.8
Os07g0225100 Oryza sativa ssp. japonica HOM05D007626 ORTHO05D009633 3.8e-10 68.9 146 32.2
Lj2A826T21 Lonicera japonica HOM05D003587 ORTHO05D004139 4.9e-10 68.6 57 61.4
Sabra10G0171700 Salix brachista HOM05D003587 ORTHO05D004139 1.4e-09 67.0 167 29.9
Potri.010G221900 Populus trichocarpa HOM05D003587 ORTHO05D004139 4.1e-09 65.5 172 29.1
ATR0115G029 Amborella trichopoda HOM05D003587 ORTHO05D004139 1.2e-08 63.9 165 31.5
AagrBONN_evm.TU.Sc2ySwM_228.3870 Anthoceros agrestis HOM05D003587 ORTHO05D004139 1.2e-08 63.9 177 33.9
Lalb_Chr19g0129681 Lupinus albus HOM05D003587 ORTHO05D004139 2.1e-08 63.2 161 31.7
MCO14G107 Micromonas commoda HOM05D003587 ORTHO05D004139 3.5e-08 62.4 133 27.8
A05p12260 Brassica napus HOM05D007626 ORTHO05D009633 6.0e-08 61.6 141 31.2
BraA05t20167Z Brassica rapa HOM05D007626 ORTHO05D009633 6.0e-08 61.6 141 31.2
RcHm_v2.0_Chr1g0363461 Rosa chinensis HOM05D003587 ORTHO05D004139 6.0e-08 61.6 170 28.2
TWI15G0175 Tripterygium wilfordii HOM05D003587 ORTHO05D004139 7.8e-08 61.2 168 30.4
Nn2g10780 Nelumbo nucifera HOM05D003587 ORTHO05D004139 1.0e-07 60.8 184 29.3
SEGI_12738 Sequoiadendron giganteum HOM05D007626 ORTHO05D009633 1.0e-07 60.8 77 42.9
BcaC02g11413 Brassica carinata HOM05D007626 ORTHO05D009633 1.3e-07 60.5 152 29.6
C04p15840 Brassica napus HOM05D007626 ORTHO05D009633 1.3e-07 60.5 152 29.6
BolC4t23153H Brassica oleracea HOM05D007626 ORTHO05D009633 1.3e-07 60.5 152 29.6
FAN01G2474 Fragaria x ananassa HOM05D003587 ORTHO05D004139 1.3e-07 60.5 163 28.8
Solyc04g049340.3 Solanum lycopersicum HOM05D003587 ORTHO05D004139 1.3e-07 60.5 167 32.3
Sopen04g019250 Solanum pennellii HOM05D003587 ORTHO05D004139 1.3e-07 60.5 167 32.3
SalBow3G0063 Salvia bowleyana HOM05D003587 ORTHO05D004139 1.7e-07 60.1 175 30.9
FAN10G2586 Fragaria x ananassa HOM05D003587 ORTHO05D004139 2.3e-07 59.7 136 31.6
FAN10G4213 Fragaria x ananassa HOM05D003587 ORTHO05D004139 2.3e-07 59.7 136 31.6
Peaxi162Scf00809g00432 Petunia axillaris HOM05D003587 ORTHO05D004139 2.3e-07 59.7 168 29.2
Nitab4.5_0000575g0260 Nicotiana tabacum HOM05D003587 ORTHO05D004139 3.0e-07 59.3 169 33.1
SEGI_04120 Sequoiadendron giganteum HOM05D007626 ORTHO05D009633 3.0e-07 59.3 81 42.0
Actinidia38276 Actinidia chinensis HOM05D003587 ORTHO05D004139 3.9e-07 58.9 126 34.1
FvH4_7g19650 Fragaria vesca HOM05D003587 ORTHO05D004139 3.9e-07 58.9 136 31.6
MD07G1175000 Malus domestica HOM05D003587 ORTHO05D004139 3.9e-07 58.9 163 29.4
Phvul.004G082300 Phaseolus vulgaris HOM05D003587 ORTHO05D004139 3.9e-07 58.9 120 34.2
SEGI_26742 Sequoiadendron giganteum HOM05D003587 ORTHO05D004139 3.9e-07 58.9 209 25.4
SEGI_29926 Sequoiadendron giganteum HOM05D003587 ORTHO05D004139 3.9e-07 58.9 209 25.4
FAN06G4872 Fragaria x ananassa HOM05D003587 ORTHO05D004139 5.1e-07 58.5 136 30.9
CAN.G1099.11 Capsicum annuum HOM05D003587 ORTHO05D004139 6.6e-07 58.2 173 31.2
Glyma.16G154700 Glycine max HOM05D003587 ORTHO05D004139 6.6e-07 58.2 118 38.1
GSVIVG01016284001 Vitis vinifera HOM05D003587 ORTHO05D004139 8.6e-07 57.8 161 31.1
Aa31LG5G4160 Aethionema arabicum HOM05D007626 ORTHO05D009633 1.1e-06 57.4 137 31.4
CiPaw.01G273300 Carya illinoinensis HOM05D003587 ORTHO05D004139 1.1e-06 57.4 177 28.8
Haze_16897 Corylus avellana HOM05D003587 ORTHO05D004139 1.1e-06 57.4 171 28.7
CsaV3_6G036380 Cucumis sativus L. HOM05D003587 ORTHO05D004139 1.1e-06 57.4 171 28.1
Ciclev10031308m.g Citrus clementina HOM05D003587 ORTHO05D004139 1.5e-06 57.0 177 27.7
PGR142G0620 Punica granatum HOM05D003587 ORTHO05D004139 1.5e-06 57.0 131 29.8
MELO3C019793.2 Cucumis melo HOM05D003587 ORTHO05D004139 1.9e-06 56.6 171 27.5
SEGI_16239 Sequoiadendron giganteum HOM05D007626 ORTHO05D009633 1.9e-06 56.6 94 38.3
Ah.12g059720 Amaranthus hybridus HOM05D007626 ORTHO05D009633 2.5e-06 56.2 175 30.3
PRCOL_00003076 Prasinoderma coloniale HOM05D003587 ORTHO05D004139 2.5e-06 56.2 109 34.9
Cfa021506 Carpinus fangiana HOM05D003587 ORTHO05D004139 3.3e-06 55.8 172 28.5
CDE04G2338 Ceratophyllum demersum HOM05D007626 ORTHO05D009633 3.3e-06 55.8 174 29.3
Cc09_g02070 Coffea canephora HOM05D003587 ORTHO05D004139 3.3e-06 55.8 169 29.0
Lj5g0014900 Lotus japonicus HOM05D003587 ORTHO05D004139 3.3e-06 55.8 158 31.6
Eucgr.G02826 Eucalyptus grandis HOM05D003587 ORTHO05D004139 4.3e-06 55.5 175 27.4
QL08p056026 Quercus lobata HOM05D003587 ORTHO05D004139 4.3e-06 55.5 174 30.5
HPP92_019029 Vanilla planifolia HOM05D007626 ORTHO05D009633 4.3e-06 55.5 68 45.6
arahy.Tifrunner.gnm1.ann1.3IGY6I Arachis hypogaea HOM05D003587 ORTHO05D004139 5.6e-06 55.1 117 34.2
arahy.Tifrunner.gnm1.ann1.TJZR4S Arachis hypogaea HOM05D003587 ORTHO05D004139 5.6e-06 55.1 117 34.2
CSS0029358 Camellia sinensis var. sinensis HOM05D003587 ORTHO05D004139 5.6e-06 55.1 171 25.7
ECA238G1416 Erigeron canadensis HOM05D003587 ORTHO05D004139 5.6e-06 55.1 141 30.5
Sed0006152 Sechium edule HOM05D003587 ORTHO05D004139 5.6e-06 55.1 164 27.4
Prupe.2G214200 Prunus persica HOM05D003587 ORTHO05D004139 9.6e-06 54.3 130 32.3
TAR633G2007 Trochodendron aralioides HOM05D003587 ORTHO05D004139 9.6e-06 54.3 123 32.5
vmacro07076 Vaccinium macrocarpon HOM05D003587 ORTHO05D004139 9.6e-06 54.3 129 33.3


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