Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04472 Striga asiatica HOM05D003886 ORTHO05D004587 2.9e-263 911.4 464 100.0
Migut.N00997 Erythranthe guttata HOM05D003886 ORTHO05D004587 4.0e-156 555.4 514 61.7
MSTRG.27896 Avicennia marina HOM05D003886 ORTHO05D004587 7.6e-155 551.2 514 61.5
Dinv24535 Davidia involucrata HOM05D003886 ORTHO05D004587 7.8e-144 514.6 515 57.9
Oeu000173.4 Olea europaea HOM05D003886 ORTHO05D004587 3.9e-143 512.3 587 52.8
Rhsim11G0111800 Rhododendron simsii HOM05D003886 ORTHO05D004587 8.7e-143 511.1 511 58.9
MSTRG.5179 Avicennia marina HOM05D003886 ORTHO05D004587 1.6e-141 506.9 486 60.9
GSVIVG01000280001 Vitis vinifera HOM05D003886 ORTHO05D004587 3.1e-140 502.7 515 57.7
Actinidia17720 Actinidia chinensis HOM05D003886 ORTHO05D004587 1.3e-138 497.3 515 58.1
vmacro01641 Vaccinium macrocarpon HOM05D003886 ORTHO05D004587 2.9e-138 496.1 538 56.5
Ca_17750_v3 Cicer arietinum L. HOM05D003886 ORTHO05D004587 6.4e-138 495.0 512 55.7
Thecc.06G049000 Theobroma cacao HOM05D003886 ORTHO05D004587 1.9e-137 493.4 517 57.3
Dinv30973 Davidia involucrata HOM05D003886 ORTHO05D004587 1.2e-136 490.7 497 58.6
Prupe.3G028400 Prunus persica HOM05D003886 ORTHO05D004587 1.2e-136 490.7 516 56.0
QL05p085089 Quercus lobata HOM05D003886 ORTHO05D004587 2.7e-136 489.6 523 55.1
Cc02_g36820 Coffea canephora HOM05D003886 ORTHO05D004587 7.9e-136 488.0 513 56.3
VMungo0464G1314 Vigna mungo HOM05D003886 ORTHO05D004587 7.9e-136 488.0 512 55.5
Lj2g0000910 Lotus japonicus HOM05D003886 ORTHO05D004587 1.3e-135 487.3 512 55.1
CiPaw.01G092000 Carya illinoinensis HOM05D003886 ORTHO05D004587 1.1e-134 484.2 517 55.3
Phvul.004G065600 Phaseolus vulgaris HOM05D003886 ORTHO05D004587 1.9e-134 483.4 512 55.5
Peaxi162Scf00048g01418 Petunia axillaris HOM05D003886 ORTHO05D004587 4.3e-134 482.3 516 57.6
Duzib235G0758 Durio zibethinus HOM05D003886 ORTHO05D004587 7.4e-134 481.5 508 56.5
Cfa002157 Carpinus fangiana HOM05D003886 ORTHO05D004587 9.6e-134 481.1 517 54.2
TWI75G0340 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 2.8e-133 479.6 511 55.8
Glyma.19G049500 Glycine max HOM05D003886 ORTHO05D004587 1.1e-132 477.6 513 54.8
Gohir.D10G001000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 1.8e-132 476.9 516 56.2
Lalb_Chr21g0317801 Lupinus albus HOM05D003886 ORTHO05D004587 1.8e-132 476.9 516 54.5
Gorai.011G001300 Gossypium raimondii HOM05D003886 ORTHO05D004587 4.0e-132 475.7 516 56.0
CSS0041623 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 5.3e-132 475.3 504 56.0
Manes.15G112100 Manihot esculenta HOM05D003886 ORTHO05D004587 9.0e-132 474.6 515 54.8
Medtr8g090035 Medicago truncatula HOM05D003886 ORTHO05D004587 1.5e-131 473.8 515 54.4
Glyma.13G045600 Glycine max HOM05D003886 ORTHO05D004587 2.0e-131 473.4 514 54.7
Peaxi162Scf00198g01528 Petunia axillaris HOM05D003886 ORTHO05D004587 3.4e-131 472.6 515 55.1
Manes.03G095300 Manihot esculenta HOM05D003886 ORTHO05D004587 9.9e-131 471.1 514 54.3
HanXRQChr17g0570801 Helianthus annuus HOM05D003886 ORTHO05D004587 1.3e-130 470.7 505 55.6
Nitab4.5_0006794g0050 Nicotiana tabacum HOM05D003886 ORTHO05D004587 6.4e-130 468.4 511 56.4
Gohir.A10G000800 Gossypium hirsutum HOM05D003886 ORTHO05D004587 1.1e-129 467.6 516 55.6
CSS0008969 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 1.4e-129 467.2 510 54.9
MD09G1170200 Malus domestica HOM05D003886 ORTHO05D004587 1.4e-129 467.2 508 54.3
MD17G1156900 Malus domestica HOM05D003886 ORTHO05D004587 5.5e-129 465.3 515 53.4
Nitab4.5_0013482g0010 Nicotiana tabacum HOM05D003886 ORTHO05D004587 9.3e-129 464.5 513 56.3
CAN.G809.69 Capsicum annuum HOM05D003886 ORTHO05D004587 2.1e-128 463.4 514 55.1
Atru.chr3.1841 Acer truncatum HOM05D003886 ORTHO05D004587 3.5e-128 462.6 529 53.5
FAN14G1097 Fragaria x ananassa HOM05D003886 ORTHO05D004587 7.9e-128 461.5 515 53.6
Solyc02g032300.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 7.9e-128 461.5 502 56.2
Solyc02g081650.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 7.9e-128 461.5 511 55.2
Sopen02g010650 Solanum pennellii HOM05D003886 ORTHO05D004587 7.9e-128 461.5 502 56.2
PGSC0003DMG400017734 Solanum tuberosum HOM05D003886 ORTHO05D004587 7.9e-128 461.5 511 55.2
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea HOM05D003886 ORTHO05D004587 1.0e-127 461.1 536 51.1
FvH4_6g36310 Fragaria vesca HOM05D003886 ORTHO05D004587 1.0e-127 461.1 515 53.2
FAN09G1502 Fragaria x ananassa HOM05D003886 ORTHO05D004587 1.0e-127 461.1 515 53.4
Sopen02g026260 Solanum pennellii HOM05D003886 ORTHO05D004587 1.3e-127 460.7 511 55.2
THA.LOC104808112 Tarenaya hassleriana HOM05D003886 ORTHO05D004587 1.3e-127 460.7 518 54.1
DCAR_022329 Daucus carota HOM05D003886 ORTHO05D004587 1.8e-127 460.3 514 55.3
FAN05G1128 Fragaria x ananassa HOM05D003886 ORTHO05D004587 1.8e-127 460.3 515 53.4
Oeu010600.1 Olea europaea HOM05D003886 ORTHO05D004587 1.8e-127 460.3 515 54.0
Sabra14G0003200 Salix brachista HOM05D003886 ORTHO05D004587 1.8e-127 460.3 517 54.2
Psat7g057280 Pisum sativum HOM05D003886 ORTHO05D004587 2.3e-127 459.9 513 53.0
Actinidia11710 Actinidia chinensis HOM05D003886 ORTHO05D004587 5.1e-127 458.8 486 56.8
FAN14G2559 Fragaria x ananassa HOM05D003886 ORTHO05D004587 6.7e-127 458.4 515 53.2
EL10Ac9g21865 Beta vulgaris HOM05D003886 ORTHO05D004587 1.1e-126 457.6 510 53.9
Lalb_Chr06g0174541 Lupinus albus HOM05D003886 ORTHO05D004587 1.9e-126 456.8 512 53.5
TWI12G0365 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 1.9e-126 456.8 514 52.3
AUR62011474 Chenopodium quinoa HOM05D003886 ORTHO05D004587 3.3e-126 456.1 515 54.6
unitig_699.g19834 Utricularia gibba HOM05D003886 ORTHO05D004587 3.3e-126 456.1 502 54.6
Oeu061917.1 Olea europaea HOM05D003886 ORTHO05D004587 5.6e-126 455.3 543 52.1
CANSAT01G1565 Cannabis sativa HOM05D003886 ORTHO05D004587 2.1e-125 453.4 519 53.2
RcHm_v2.0_Chr2g0148321 Rosa chinensis HOM05D003886 ORTHO05D004587 1.4e-124 450.7 513 53.8
AUR62016582 Chenopodium quinoa HOM05D003886 ORTHO05D004587 4.0e-124 449.1 510 54.7
ECA234G0089 Erigeron canadensis HOM05D003886 ORTHO05D004587 4.0e-124 449.1 502 54.0
Nn7g35782 Nelumbo nucifera HOM05D003886 ORTHO05D004587 9.0e-124 448.0 513 52.4
Ciclev10020009m.g Citrus clementina HOM05D003886 ORTHO05D004587 2.0e-123 446.8 529 52.2
HanXRQChr17g0545561 Helianthus annuus HOM05D003886 ORTHO05D004587 2.0e-123 446.8 508 52.8
Eucgr.F04066 Eucalyptus grandis HOM05D003886 ORTHO05D004587 2.2e-122 443.4 508 53.1
PGR102G2920 Punica granatum HOM05D003886 ORTHO05D004587 4.9e-122 442.2 523 52.0
Sc24g0001760 Simmondsia chinensis HOM05D003886 ORTHO05D004587 6.5e-122 441.8 511 52.1
Potri.014G000600 Populus trichocarpa HOM05D003886 ORTHO05D004587 8.4e-122 441.4 518 53.3
Lalb_Chr04g0257491 Lupinus albus HOM05D003886 ORTHO05D004587 1.9e-121 440.3 511 51.1
Carub.0002s2589 Capsella rubella HOM05D003886 ORTHO05D004587 3.2e-121 439.5 516 52.9
Sp5g34070 Schrenkiella parvula HOM05D003886 ORTHO05D004587 7.1e-121 438.3 519 51.8
TAR624G0406 Trochodendron aralioides HOM05D003886 ORTHO05D004587 7.1e-121 438.3 495 53.9
Ah.01g020350 Amaranthus hybridus HOM05D003886 ORTHO05D004587 9.3e-121 438.0 510 51.4
AL2G39480 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 9.3e-121 438.0 519 51.4
COL.COLO4_26802 Corchorus olitorius HOM05D003886 ORTHO05D004587 9.3e-121 438.0 517 52.8
MELO3C015232.2 Cucumis melo HOM05D003886 ORTHO05D004587 1.2e-120 437.6 503 51.5
CsaV3_1G038140 Cucumis sativus L. HOM05D003886 ORTHO05D004587 2.7e-120 436.4 503 51.7
TAR626G1553 Trochodendron aralioides HOM05D003886 ORTHO05D004587 2.7e-120 436.4 509 51.9
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 7.9e-120 434.9 497 53.7
Thhalv10018536m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.0e-119 434.5 508 52.6
BolC6t40307H Brassica oleracea HOM05D003886 ORTHO05D004587 1.3e-119 434.1 517 51.5
Carub.0001s1642 Capsella rubella HOM05D003886 ORTHO05D004587 2.3e-119 433.3 507 53.1
Sed0016198 Sechium edule HOM05D003886 ORTHO05D004587 2.3e-119 433.3 511 52.4
BcaC08g47466 Brassica carinata HOM05D003886 ORTHO05D004587 3.0e-119 433.0 517 51.3
C06p52890 Brassica napus HOM05D003886 ORTHO05D004587 1.1e-118 431.0 518 51.2
BraA07t31924Z Brassica rapa HOM05D003886 ORTHO05D004587 1.1e-118 431.0 511 51.5
AT1G79020 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 3.3e-118 429.5 516 51.4
A07p44160 Brassica napus HOM05D003886 ORTHO05D004587 4.3e-118 429.1 517 50.7
Thhalv10007658m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.6e-117 427.2 509 52.8
AL1G28850 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 6.9e-116 421.8 507 52.5
BcaB02g07192 Brassica carinata HOM05D003886 ORTHO05D004587 9.0e-116 421.4 510 51.2
A02p22460 Brassica napus HOM05D003886 ORTHO05D004587 2.6e-115 419.9 507 52.3
BcaC08g45391 Brassica carinata HOM05D003886 ORTHO05D004587 3.4e-115 419.5 514 51.6
AT1G16690 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 4.5e-115 419.1 507 52.3
C06p30220 Brassica napus HOM05D003886 ORTHO05D004587 4.5e-115 419.1 514 51.4
BolC6t38185H Brassica oleracea HOM05D003886 ORTHO05D004587 4.5e-115 419.1 514 51.4
Duzib192G0492 Durio zibethinus HOM05D003886 ORTHO05D004587 7.6e-115 418.3 514 51.2
CARHR017150 Cardamine hirsuta HOM05D003886 ORTHO05D004587 1.7e-114 417.2 511 51.9
BcaC03g15859 Brassica carinata HOM05D003886 ORTHO05D004587 2.2e-114 416.8 507 52.5
BraA07t30377Z Brassica rapa HOM05D003886 ORTHO05D004587 5.0e-114 415.6 514 51.2
C02p36140 Brassica napus HOM05D003886 ORTHO05D004587 8.4e-114 414.8 507 52.3
TPR.G6290 Trifolium pratense HOM05D003886 ORTHO05D004587 4.2e-113 412.5 478 52.9
BraA02t07251Z Brassica rapa HOM05D003886 ORTHO05D004587 2.7e-112 409.8 506 51.0
MBI14_g11787_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 6.1e-112 408.7 483 50.3
A07p27360 Brassica napus HOM05D003886 ORTHO05D004587 2.3e-111 406.8 509 50.5
Lsat_1_v5_gn_3_52161 Lactuca sativa HOM05D003886 ORTHO05D004587 3.0e-111 406.4 433 56.8
PSO782G4625 Papaver somniferum HOM05D003886 ORTHO05D004587 1.1e-110 404.4 514 49.8
PSO063G1610 Papaver somniferum HOM05D003886 ORTHO05D004587 5.7e-110 402.1 514 49.4
Sp1g14830 Schrenkiella parvula HOM05D003886 ORTHO05D004587 4.8e-109 399.1 508 50.2
HPP92_015734 Vanilla planifolia HOM05D003886 ORTHO05D004587 2.6e-107 393.3 509 48.9
Lj5C312G11 Lonicera japonica HOM05D003886 ORTHO05D004587 5.5e-105 385.6 435 54.9
Ciclev10021199m.g Citrus clementina HOM05D003886 ORTHO05D004587 5.9e-99 365.5 337 61.4
CDE02G1355 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 8.5e-98 361.7 486 45.5
Aqoxy6G00358 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 9.4e-97 358.2 508 47.2
Zm00001eb308950 Zea mays HOM05D003886 ORTHO05D004587 6.1e-96 355.5 509 46.6
ATR0626G209 Amborella trichopoda HOM05D003886 ORTHO05D004587 2.0e-94 350.5 498 45.6
SHI31130 Sapria himalayana HOM05D003886 ORTHO05D004587 2.2e-93 347.1 513 45.0
Os08g0338900 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 2.8e-93 346.7 514 44.2
CDE03G0037 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 3.5e-91 339.7 486 46.1
BolC2t09627H Brassica oleracea HOM05D003886 ORTHO05D004587 3.6e-88 329.7 329 59.0
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 2.3e-87 327.0 503 45.7
CDE05G0598 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 6.5e-82 308.9 489 40.7
Mapoly0014s0003 Marchantia polymorpha HOM05D003886 ORTHO05D004587 5.5e-81 305.8 531 40.9
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea HOM05D003886 ORTHO05D004587 2.3e-79 300.4 342 51.5
CDE06G2124 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 3.0e-79 300.1 414 47.1
SMO367G1242 Selaginella moellendorffii HOM05D003886 ORTHO05D004587 4.8e-77 292.7 507 41.4
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05D003886 ORTHO05D004587 2.4e-76 290.4 514 41.2
ATR0751G140 Amborella trichopoda HOM05D003886 ORTHO05D004587 3.2e-73 280.0 330 51.5
ClCG03G018020 Citrullus lanatus HOM05D003886 ORTHO05D004587 1.3e-69 268.1 295 52.9
Pp3c23_7050 Physcomitrium patens HOM05D003886 ORTHO05D004587 1.1e-68 265.0 514 37.5
CAN.G1586.1 Capsicum annuum HOM05D003886 ORTHO05D004587 5.9e-67 259.2 245 61.6
ECA228G0002 Erigeron canadensis HOM05D003886 ORTHO05D004587 5.7e-62 242.7 357 47.3
Nitab4.5_0000389g0130 Nicotiana tabacum HOM05D003886 ORTHO05D004587 5.4e-60 236.1 327 48.3
Haze_16249 Corylus avellana HOM05D003886 ORTHO05D004587 2.1e-56 224.2 263 50.6
Pp3c16_8390 Physcomitrium patens HOM05D003886 ORTHO05D004587 2.0e-54 217.6 503 35.2
Nn8g38501 Nelumbo nucifera HOM05D003886 ORTHO05D004587 4.1e-52 209.9 217 57.6
Cpa.g.sc10.19 Carica papaya HOM05D003886 ORTHO05D004587 2.0e-51 207.6 196 62.2
HanXRQChr08g0234351 Helianthus annuus HOM05D003886 ORTHO05D004587 5.6e-49 199.5 154 73.4
Zm00001eb097400 Zea mays HOM05D003886 ORTHO05D004587 1.3e-45 188.3 224 50.0
Nitab4.5_0000389g0110 Nicotiana tabacum HOM05D003886 ORTHO05D004587 6.4e-45 186.0 171 59.1
CBR_g38268 Chara braunii HOM05D003886 ORTHO05D004587 6.8e-39 166.0 349 36.4
Cpa.g.sc10.20 Carica papaya HOM05D003886 ORTHO05D004587 6.4e-37 159.5 234 46.2
PGSC0003DMG400013092 Solanum tuberosum HOM05D003886 ORTHO05D004587 6.0e-35 152.9 225 45.3
BcaB05g25167 Brassica carinata HOM05D003886 ORTHO05D004587 3.0e-34 150.6 122 68.0
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 6.6e-34 149.4 566 28.4
CARHR072690 Cardamine hirsuta HOM05D003886 ORTHO05D004587 9.6e-33 145.6 231 43.3
SEGI_11104 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 3.6e-32 143.7 319 35.7
Os09g0284600 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 5.8e-30 136.3 253 38.7
ClCG03G018040 Citrullus lanatus HOM05D003886 ORTHO05D004587 1.7e-26 124.8 130 54.6
GSVIVG01024509001 Vitis vinifera HOM05D003886 ORTHO05D004587 9.6e-25 119.0 87 75.9
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea HOM05D003886 ORTHO05D004587 1.4e-23 115.2 122 57.4
ATR0751G177 Amborella trichopoda HOM05D003886 ORTHO05D004587 9.9e-22 109.0 141 46.1
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea HOM05D003886 ORTHO05D019782 1.3e-21 108.6 115 58.3
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea HOM05D003886 ORTHO05D004587 1.9e-20 104.8 163 46.6
SEGI_16863 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 3.2e-20 104.0 207 36.2
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 6.7e-18 96.3 134 47.8
Cre03.g196400 Chlamydomonas reinhardtii HOM05D003886 ORTHO05D004587 4.8e-16 90.1 485 25.4
Lj5C312T17 Lonicera japonica HOM05D001538 ORTHO05D004587 1.3e-13 82.0 50 86.0
BcaB05g25166 Brassica carinata HOM05D000912 ORTHO05D001232 4.9e-13 80.1 111 46.8
MCO08G116 Micromonas commoda HOM05D003886 ORTHO05D004587 1.9e-12 78.2 554 26.0
Aqoxy6G02601 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 3.5e-11 73.9 130 41.5
CAN.G1600.1 Capsicum annuum HOM05D003886 ORTHO05D004587 7.9e-11 72.8 61 63.9
Gohir.A07G077000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 2.3e-10 71.2 53 75.5
PRCOL_00004606 Prasinoderma coloniale HOM05D003886 ORTHO05D004587 3.9e-10 70.5 330 27.0
Haze_16250 Corylus avellana HOM05D003886 ORTHO05D004587 5.1e-10 70.1 44 70.5
SHI49864 Sapria himalayana HOM05D003886 ORTHO05D004587 5.1e-10 70.1 40 82.5
Dinv30975 Davidia involucrata HOM05D000190 ORTHO05D000113 4.8e-08 63.5 51 66.7
SHI44505 Sapria himalayana HOM05D003886 ORTHO05D009901 5.8e-06 56.6 27 85.2
arahy.Tifrunner.gnm1.ann1.EDPG13 Arachis hypogaea HOM05D003961 ORTHO05D038865 7.6e-06 56.2 120 38.3


User provided reference genes

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