Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04458 Striga asiatica HOM05D008164 ORTHO05D010222 2.8e-101 372.1 206 100.0
Migut.N00863 Erythranthe guttata HOM05D008164 ORTHO05D010222 2.8e-29 132.9 167 49.7
Gohir.A05G110000 Gossypium hirsutum HOM05D008164 ORTHO05D010222 1.5e-14 84.0 161 31.7
QL02p103286 Quercus lobata HOM05D008164 ORTHO05D010222 4.1e-12 75.9 180 42.2
Ciclev10002734m.g Citrus clementina HOM05D008164 ORTHO05D010222 5.4e-12 75.5 167 31.7
Lj5P282T61 Lonicera japonica HOM05D008164 ORTHO05D010222 1.6e-11 73.9 179 45.8
CiPaw.05G001800 Carya illinoinensis HOM05D008164 ORTHO05D010222 3.5e-11 72.8 171 30.4
PGSC0003DMG400038752 Solanum tuberosum HOM05D008164 ORTHO05D010222 7.8e-11 71.6 114 36.0
Rhsim11G0118100 Rhododendron simsii HOM05D008164 ORTHO05D010222 1.3e-10 70.9 163 41.7
Dinv29630 Davidia involucrata HOM05D000112 ORTHO05D000564 2.3e-10 70.1 165 45.5
Gohir.D05G110300 Gossypium hirsutum HOM05D008164 ORTHO05D010222 2.3e-10 70.1 161 39.8
Gorai.009G114500 Gossypium raimondii HOM05D008164 ORTHO05D010222 2.3e-10 70.1 161 39.8
Solyc01g103070.2 Solanum lycopersicum HOM05D008164 ORTHO05D010222 6.6e-10 68.6 172 42.4
Peaxi162Scf00011g00188 Petunia axillaris HOM05D008164 ORTHO05D010222 8.6e-10 68.2 126 33.3
Sopen01g045480 Solanum pennellii HOM05D008164 ORTHO05D010222 8.6e-10 68.2 173 40.5
Cc02_g23560 Coffea canephora HOM05D008164 ORTHO05D010222 1.2e-08 64.3 179 39.1
Cfa004447 Carpinus fangiana HOM05D008164 ORTHO05D010222 1.6e-08 63.9 176 34.7
Manes.10G108200 Manihot esculenta HOM05D008164 ORTHO05D010222 1.1e-07 61.2 173 38.7
Sc23g0003940 Simmondsia chinensis HOM05D008164 ORTHO05D010222 1.1e-07 61.2 170 40.0
PGR142G0304 Punica granatum HOM05D008164 ORTHO05D010222 1.4e-07 60.8 114 34.2
Thecc.06G017700 Theobroma cacao HOM05D008164 ORTHO05D010222 2.3e-07 60.1 176 27.3
Phvul.006G221400 Phaseolus vulgaris HOM05D045043 ORTHO05D010222 3.1e-07 59.7 164 43.9
TWI14G0748 Tripterygium wilfordii HOM05D008164 ORTHO05D010222 1.5e-06 57.4 112 35.7
TAR628G0422 Trochodendron aralioides HOM05D008164 ORTHO05D010222 2.0e-06 57.0 165 28.5
Atru.chr6.245 Acer truncatum HOM05D008164 ORTHO05D010222 4.4e-06 55.8 196 26.5
Haze_09987 Corylus avellana HOM05D008164 ORTHO05D010222 5.8e-06 55.5 174 33.9
Duzib235G0793 Durio zibethinus HOM05D008164 ORTHO05D010222 7.5e-06 55.1 172 27.3
Eucgr.I02795 Eucalyptus grandis HOM05D008164 ORTHO05D010222 7.5e-06 55.1 183 24.6
Potri.003G001200 Populus trichocarpa HOM05D008164 ORTHO05D010222 9.9e-06 54.7 163 41.1


User provided reference genes

Program Settings