Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04421 Striga asiatica HOM05D006675 ORTHO05D008302 9.5e-92 340.1 167 100.0
MSTRG.1795 Avicennia marina HOM05D006675 ORTHO05D008302 4.9e-80 301.2 161 88.2
Oeu017091.1 Olea europaea HOM05D006675 ORTHO05D008302 8.4e-80 300.4 167 86.2
GSVIVG01013027001 Vitis vinifera HOM05D006675 ORTHO05D008302 2.7e-78 295.4 161 84.5
Migut.E01322 Erythranthe guttata HOM05D006675 ORTHO05D008302 4.6e-78 294.7 161 87.6
QL12p001835 Quercus lobata HOM05D006675 ORTHO05D008302 3.9e-77 291.6 160 84.4
SalBow8G0964 Salvia bowleyana HOM05D006675 ORTHO05D008302 5.1e-77 291.2 161 86.3
CiPaw.12G069400 Carya illinoinensis HOM05D006675 ORTHO05D008302 1.9e-76 289.3 161 83.9
RcHm_v2.0_Chr7g0212211 Rosa chinensis HOM05D006675 ORTHO05D008302 3.3e-76 288.5 161 83.9
Peaxi162Scf00052g00336 Petunia axillaris HOM05D006675 ORTHO05D008302 4.3e-76 288.1 159 83.6
Potri.001G135700 Populus trichocarpa HOM05D006675 ORTHO05D008302 7.3e-76 287.3 161 82.6
Sed0011153 Sechium edule HOM05D006675 ORTHO05D008302 7.3e-76 287.3 161 84.5
Duzib205G0370 Durio zibethinus HOM05D006675 ORTHO05D008302 9.6e-76 287.0 161 82.0
MELO3C013816.2 Cucumis melo HOM05D006675 ORTHO05D008302 1.2e-75 286.6 161 84.5
Dinv06918 Davidia involucrata HOM05D006675 ORTHO05D008302 1.2e-75 286.6 159 84.3
Thecc.03G311400 Theobroma cacao HOM05D006675 ORTHO05D008302 1.2e-75 286.6 161 82.0
CAN.G773.29 Capsicum annuum HOM05D006675 ORTHO05D008302 1.6e-75 286.2 161 81.4
CsaV3_3G001280 Cucumis sativus L. HOM05D006675 ORTHO05D008302 1.6e-75 286.2 161 84.5
TWI60G1033 Tripterygium wilfordii HOM05D006675 ORTHO05D008302 1.6e-75 286.2 161 81.4
unitig_61.g26418 Utricularia gibba HOM05D006675 ORTHO05D008302 2.1e-75 285.8 161 82.6
PGSC0003DMG400009297 Solanum tuberosum HOM05D006675 ORTHO05D008302 2.8e-75 285.4 161 81.4
Solyc08g076130.3 Solanum lycopersicum HOM05D006675 ORTHO05D008302 4.7e-75 284.6 161 81.4
Sopen08g024770 Solanum pennellii HOM05D006675 ORTHO05D008302 4.7e-75 284.6 161 81.4
COL.COLO4_16920 Corchorus olitorius HOM05D006675 ORTHO05D008302 6.2e-75 284.3 161 82.0
PGSC0003DMG400003501 Solanum tuberosum HOM05D006675 ORTHO05D008302 8.1e-75 283.9 161 81.4
Aqoxy5G00552 Aquilegia oxysepala HOM05D006675 ORTHO05D008302 1.1e-74 283.5 161 80.7
Ciclev10002637m.g Citrus clementina HOM05D006675 ORTHO05D008302 1.1e-74 283.5 161 82.6
Manes.01G194600 Manihot esculenta HOM05D006675 ORTHO05D008302 1.1e-74 283.5 161 80.1
Atru.chr3.2397 Acer truncatum HOM05D006675 ORTHO05D008302 1.4e-74 283.1 161 83.2
Cfa009033 Carpinus fangiana HOM05D006675 ORTHO05D008302 1.4e-74 283.1 161 81.4
Sc10g0009260 Simmondsia chinensis HOM05D006675 ORTHO05D008302 1.8e-74 282.7 161 79.5
PGR042G1238 Punica granatum HOM05D006675 ORTHO05D008302 2.4e-74 282.3 161 82.6
CSS0012354 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 3.1e-74 282.0 161 80.7
CSS0042811 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 3.1e-74 282.0 161 80.7
Haze_12062 Corylus avellana HOM05D006675 ORTHO05D008302 3.1e-74 282.0 161 82.0
Lj8A133G65 Lonicera japonica HOM05D006675 ORTHO05D008302 3.1e-74 282.0 161 80.7
DCAR_024956 Daucus carota HOM05D006675 ORTHO05D008302 4.0e-74 281.6 161 82.0
Gohir.D03G176700 Gossypium hirsutum HOM05D006675 ORTHO05D008302 6.9e-74 280.8 161 82.0
FvH4_5g23270 Fragaria vesca HOM05D006675 ORTHO05D008302 9.0e-74 280.4 161 81.4
FAN18G2874 Fragaria x ananassa HOM05D006675 ORTHO05D008302 9.0e-74 280.4 161 81.4
Lj2g0021996 Lotus japonicus HOM05D006675 ORTHO05D008302 1.5e-73 279.6 161 78.9
CANSAT21G2314 Cannabis sativa HOM05D006675 ORTHO05D008302 2.0e-73 279.3 161 80.7
Gohir.A03G000027 Gossypium hirsutum HOM05D006675 ORTHO05D008302 2.0e-73 279.3 161 81.4
FAN18G0120 Fragaria x ananassa HOM05D006675 ORTHO05D008302 2.6e-73 278.9 161 80.7
AUR62007364 Chenopodium quinoa HOM05D006675 ORTHO05D008302 4.4e-73 278.1 160 79.4
AL7G35150 Arabidopsis lyrata HOM05D006675 ORTHO05D008302 5.8e-73 277.7 161 79.5
Sp7g17730 Schrenkiella parvula HOM05D006675 ORTHO05D008302 5.8e-73 277.7 161 78.9
Carub.0007s2216 Capsella rubella HOM05D006675 ORTHO05D008302 7.6e-73 277.3 161 78.9
Eucgr.E01319 Eucalyptus grandis HOM05D006675 ORTHO05D008302 7.6e-73 277.3 156 82.1
Actinidia01330 Actinidia chinensis HOM05D006675 ORTHO05D008302 9.9e-73 276.9 154 83.1
AT4G19003 Arabidopsis thaliana HOM05D006675 ORTHO05D008302 9.9e-73 276.9 161 78.9
Duzib068G1343 Durio zibethinus HOM05D006675 ORTHO05D008302 9.9e-73 276.9 161 79.5
Thhalv10026368m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 1.7e-72 276.2 161 78.9
THA.LOC104806177 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 1.7e-72 276.2 161 78.9
VMungo1215G1847 Vigna mungo HOM05D006675 ORTHO05D008302 1.7e-72 276.2 161 79.5
HanXRQChr12g0362191 Helianthus annuus HOM05D006675 ORTHO05D008302 2.2e-72 275.8 161 77.6
Lsat_1_v5_gn_9_15400 Lactuca sativa HOM05D006675 ORTHO05D008302 2.2e-72 275.8 154 81.2
ECA233G1922 Erigeron canadensis HOM05D006675 ORTHO05D008302 2.9e-72 275.4 161 76.4
BcaNung04023 Brassica carinata HOM05D006675 ORTHO05D008302 3.8e-72 275.0 161 78.3
Eucgr.E01313 Eucalyptus grandis HOM05D006675 ORTHO05D008302 4.9e-72 274.6 156 81.4
Phvul.002G134300 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 4.9e-72 274.6 161 78.3
BraA01t01049Z Brassica rapa HOM05D006675 ORTHO05D008302 6.4e-72 274.2 161 78.3
Lalb_Chr16g0380971 Lupinus albus HOM05D006675 ORTHO05D008302 6.4e-72 274.2 161 76.4
THA.LOC104798450 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 8.4e-72 273.9 159 79.2
MD11G1243800 Malus domestica HOM05D006675 ORTHO05D008302 1.1e-71 273.5 162 78.4
BcaC09g51446 Brassica carinata HOM05D000169 ORTHO05D008302 1.4e-71 273.1 161 77.6
BolC1t01279H Brassica oleracea HOM05D000169 ORTHO05D000542 1.4e-71 273.1 161 77.6
Cc08_g03740 Coffea canephora HOM05D006675 ORTHO05D008302 1.4e-71 273.1 161 77.0
Medtr5g028000 Medicago truncatula HOM05D006675 ORTHO05D008302 1.9e-71 272.7 161 78.3
Rhsim06G0208000 Rhododendron simsii HOM05D006675 ORTHO05D008302 1.9e-71 272.7 160 81.9
C01p13040 Brassica napus HOM05D000169 ORTHO05D000542 2.4e-71 272.3 161 77.6
CARHR225840 Cardamine hirsuta HOM05D006675 ORTHO05D008302 2.4e-71 272.3 161 77.0
Glyma.09G209600 Glycine max HOM05D006675 ORTHO05D008302 3.2e-71 271.9 161 76.4
Ca_25161_v3 Cicer arietinum L. HOM05D006675 ORTHO05D000003 7.1e-71 270.8 160 76.2
Prupe.4G182100 Prunus persica HOM05D006675 ORTHO05D008302 1.6e-70 269.6 160 78.1
ClCG06G010630 Citrullus lanatus HOM05D006675 ORTHO05D008302 2.7e-70 268.9 172 77.3
Aa31LG6G1700 Aethionema arabicum HOM05D006675 ORTHO05D008302 6.0e-70 267.7 161 77.6
Glyma.01G011400 Glycine max HOM05D006675 ORTHO05D008302 7.8e-70 267.3 161 75.8
Nn1g09734 Nelumbo nucifera HOM05D006675 ORTHO05D008302 1.3e-69 266.5 161 76.4
PSO170G4469 Papaver somniferum HOM05D006675 ORTHO05D008302 1.3e-69 266.5 159 76.1
HPP92_023365 Vanilla planifolia HOM05D006675 ORTHO05D008302 1.3e-69 266.5 161 75.2
HanXRQChr14g0430781 Helianthus annuus HOM05D006675 ORTHO05D008302 3.0e-69 265.4 160 75.0
ATR0796G253 Amborella trichopoda HOM05D006675 ORTHO05D008302 8.7e-69 263.8 159 76.7
EL10Ac5g11997 Beta vulgaris HOM05D006675 ORTHO05D008302 8.7e-69 263.8 159 76.7
Thhalv10015765m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 3.3e-68 261.9 161 75.2
PSO017G0801 Papaver somniferum HOM05D006675 ORTHO05D008302 1.6e-67 259.6 159 75.5
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 1.3e-64 250.0 184 64.7
Zm00001eb157890 Zea mays HOM05D006675 ORTHO05D008302 2.9e-64 248.8 161 70.8
CDE02G0997 Ceratophyllum demersum HOM05D006675 ORTHO05D008302 2.7e-62 242.3 159 71.7
SEGI_13659 Sequoiadendron giganteum HOM05D006675 ORTHO05D008302 1.9e-60 236.1 161 67.7
Mapoly0004s0185 Marchantia polymorpha HOM05D006675 ORTHO05D008302 3.3e-60 235.3 159 65.4
SGA_v2.0_scaffold8G04249 Striga asiatica HOM05D006675 ORTHO05D008302 4.3e-60 235.0 154 77.9
Nitab4.5_0002897g0050 Nicotiana tabacum HOM05D006675 ORTHO05D008302 1.4e-58 229.9 161 68.3
SMO364G0912 Selaginella moellendorffii HOM05D006675 ORTHO05D008302 1.1e-55 220.3 159 61.6
Sabra01G0105000 Salix brachista HOM05D006675 ORTHO05D008302 1.2e-54 216.9 174 62.6
Dinv29017 Davidia involucrata HOM05D006675 ORTHO05D008302 6.0e-54 214.5 134 74.6
Pp3c15_1420 Physcomitrium patens HOM05D006675 ORTHO05D008302 7.9e-54 214.2 159 62.3
Gorai.003G186000 Gossypium raimondii HOM05D006675 ORTHO05D008302 1.5e-52 209.9 120 80.8
Nitab4.5_0002188g0010 Nicotiana tabacum HOM05D006675 ORTHO05D008302 3.3e-52 208.8 140 70.7
TPR.G19460 Trifolium pratense HOM05D006675 ORTHO05D008302 2.4e-50 202.6 120 75.8
CBR_g10842 Chara braunii HOM05D006675 ORTHO05D008302 5.8e-49 198.0 158 57.0
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea HOM05D006675 ORTHO05D008302 7.6e-49 197.6 147 62.6
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis HOM05D006675 ORTHO05D008302 3.2e-47 192.2 153 61.4
arahy.Tifrunner.gnm1.ann1.1JB7Z5 Arachis hypogaea HOM05D000001 ORTHO05D000003 2.2e-43 179.5 185 53.0
arahy.Tifrunner.gnm1.ann1.K4EES2 Arachis hypogaea HOM05D000001 ORTHO05D000003 2.2e-43 179.5 185 53.0
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 2.2e-40 169.5 95 76.8
Cre02.g076400 Chlamydomonas reinhardtii HOM05D006675 ORTHO05D008302 8.5e-40 167.5 158 48.7
Ah.12g055570 Amaranthus hybridus HOM05D000160 ORTHO05D008302 1.2e-38 163.7 113 72.6
vmacro00263 Vaccinium macrocarpon HOM05D006675 ORTHO05D008302 2.3e-37 159.5 99 75.8
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea HOM05D006675 ORTHO05D008302 1.7e-35 153.3 118 59.3
Psat2g139880 Pisum sativum HOM05D006675 ORTHO05D008302 4.1e-34 148.7 91 73.6
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla HOM05D006675 ORTHO05D008302 2.9e-32 142.5 180 45.0
PRCOL_00001914 Prasinoderma coloniale HOM05D006675 ORTHO05D008302 3.6e-30 135.6 161 43.5
MCO12G007 Micromonas commoda HOM05D006675 ORTHO05D008302 2.0e-28 129.8 159 39.6
GSVIVG01009131001 Vitis vinifera HOM05D006675 ORTHO05D008302 2.0e-28 129.8 80 72.5
Os01g0658500 Oryza sativa ssp. japonica HOM05D006675 ORTHO05D008302 6.3e-27 124.8 73 75.3
Actinidia29284 Actinidia chinensis HOM05D006675 ORTHO05D008302 2.7e-22 109.4 65 78.5
BcaB07g30589 Brassica carinata HOM05D006675 ORTHO05D008302 2.6e-20 102.8 79 64.6
BcaB06g29627 Brassica carinata HOM05D006675 ORTHO05D008302 2.8e-19 99.4 80 67.5
A01p11020 Brassica napus HOM05D006675 ORTHO05D008302 5.3e-18 95.1 56 82.1
Hund14383 Selenicereus undatus HOM05D006675 ORTHO05D008302 5.3e-18 95.1 56 76.8
Haze_08131 Corylus avellana HOM05D006675 ORTHO05D008302 6.5e-16 88.2 50 80.0
FAN13G1728 Fragaria x ananassa HOM05D006675 ORTHO05D008302 6.1e-14 81.6 46 78.3
CARHR288450 Cardamine hirsuta HOM05D006675 ORTHO05D008302 5.7e-12 75.1 55 54.5
Gohir.D12G043050 Gossypium hirsutum HOM05D006675 ORTHO05D008302 4.2e-07 58.9 45 62.2
Phvul.002G134150 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 9.4e-07 57.8 60 50.0


User provided reference genes

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