Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 5.3e-78 294.3 147 100.0
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 1.0e-52 210.3 147 75.5
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 2.1e-50 202.6 148 73.6
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 6.7e-49 197.6 147 72.1
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 8.8e-49 197.2 150 70.7
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 2.2e-47 192.6 145 69.7
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 1.1e-46 190.3 148 70.3
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 3.1e-46 188.7 143 68.5
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 4.1e-46 188.3 132 72.0
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 4.1e-46 188.3 147 67.3
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 5.3e-46 188.0 144 69.4
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 9.1e-46 187.2 142 66.9
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 9.1e-46 187.2 128 74.2
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 1.2e-45 186.8 143 67.8
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 1.2e-45 186.8 143 67.8
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 1.2e-45 186.8 144 67.4
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 1.5e-45 186.4 144 68.1
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 2.0e-45 186.0 143 64.3
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 2.0e-45 186.0 145 67.6
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 2.0e-45 186.0 147 70.7
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 2.6e-45 185.7 145 67.6
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 2.6e-45 185.7 144 68.8
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 2.6e-45 185.7 147 70.7
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 4.5e-45 184.9 144 67.4
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 5.9e-45 184.5 145 67.6
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 2.2e-44 182.6 144 66.7
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 2.2e-44 182.6 147 65.3
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 2.9e-44 182.2 143 67.1
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 5.0e-44 181.4 144 66.0
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 5.0e-44 181.4 148 65.5
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 6.5e-44 181.0 144 66.0
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 8.5e-44 180.6 142 64.1
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 1.4e-43 179.9 143 67.1
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 1.4e-43 179.9 142 64.8
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 2.5e-43 179.1 131 71.0
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 4.2e-43 178.3 143 67.8
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 5.5e-43 177.9 144 63.2
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 7.2e-43 177.6 142 63.4
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 7.2e-43 177.6 143 66.4
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 9.4e-43 177.2 145 64.8
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 1.2e-42 176.8 140 65.7
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 1.2e-42 176.8 142 64.8
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 2.1e-42 176.0 141 66.0
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 2.1e-42 176.0 128 71.9
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 3.6e-42 175.3 143 64.3
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 4.7e-42 174.9 146 65.1
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 4.7e-42 174.9 146 65.1
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.4e-41 173.3 147 63.3
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 1.8e-41 172.9 143 62.2
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.8e-41 172.9 143 62.2
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 1.8e-41 172.9 147 64.6
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 1.8e-41 172.9 144 63.2
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 1.8e-41 172.9 146 62.3
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 1.8e-41 172.9 143 65.7
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 3.0e-41 172.2 143 62.9
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 3.0e-41 172.2 123 69.9
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 5.2e-41 171.4 143 65.7
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 6.7e-41 171.0 144 62.5
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 6.7e-41 171.0 143 65.7
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.1e-40 170.2 143 61.5
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 1.5e-40 169.9 144 65.3
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 1.5e-40 169.9 143 62.9
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 2.0e-40 169.5 154 61.7
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 2.0e-40 169.5 143 65.7
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 4.4e-40 168.3 142 61.3
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 4.4e-40 168.3 145 62.1
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 5.7e-40 167.9 130 70.0
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 5.7e-40 167.9 144 61.1
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 7.4e-40 167.5 145 62.8
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 1.7e-39 166.4 145 63.4
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 1.7e-39 166.4 143 65.0
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 4.8e-39 164.9 145 60.0
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 2.4e-38 162.5 143 62.2
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 4.1e-38 161.8 175 51.4
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 9.1e-38 160.6 145 60.0
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 1.2e-37 160.2 144 59.0
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 2.0e-37 159.5 145 59.3
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 3.5e-37 158.7 144 61.8
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 5.9e-37 157.9 148 57.4
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 7.7e-37 157.5 143 56.6
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 1.3e-36 156.8 143 60.8
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 1.7e-36 156.4 144 58.3
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 2.2e-36 156.0 134 60.4
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 2.9e-36 155.6 142 59.2
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 5.0e-36 154.8 144 58.3
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 6.5e-36 154.5 124 66.9
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 8.5e-36 154.1 143 58.0
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 1.1e-35 153.7 145 58.6
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 1.9e-35 152.9 140 61.4
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 3.2e-35 152.1 148 59.5
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 5.5e-35 151.4 142 60.6
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 5.5e-35 151.4 144 58.3
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 7.2e-35 151.0 145 58.6
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 9.4e-35 150.6 146 60.3
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 4.7e-34 148.3 143 56.6
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 8.0e-34 147.5 145 57.9
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 1.8e-33 146.4 146 58.9
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 2.3e-33 146.0 148 59.5
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 2.0e-32 142.9 145 59.3
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 9.7e-32 140.6 91 76.9
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 1.7e-31 139.8 149 59.1
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 6.3e-31 137.9 129 60.5
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 1.4e-30 136.7 129 60.5
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 1.4e-30 136.7 129 60.5
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 4.1e-30 135.2 116 62.9
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 2.7e-29 132.5 123 58.5
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 1.0e-28 130.6 126 57.9
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 1.0e-28 130.6 145 51.0
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 1.3e-28 130.2 128 57.8
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 2.2e-28 129.4 124 53.2
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 2.9e-28 129.0 155 48.4
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 1.1e-27 127.1 128 57.0
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 1.5e-27 126.7 127 59.1
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 2.6e-24 115.9 125 56.0
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 3.4e-24 115.5 145 46.9
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 4.4e-24 115.2 123 52.0
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 1.3e-23 113.6 126 54.0
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 2.2e-23 112.8 88 68.2
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 1.4e-22 110.2 146 45.2
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 1.2e-21 107.1 131 47.3
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 2.7e-21 105.9 99 62.6
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 7.7e-21 104.4 145 43.4
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 1.9e-19 99.8 136 44.9
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 7.2e-19 97.8 124 49.2
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 2.2e-15 86.3 97 58.8
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 2.4e-14 82.8 97 56.7
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 1.2e-10 70.5 54 61.1
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 2.1e-10 69.7 94 44.7
Zm00001eb019850 Zea mays HOM05D005924 ORTHO05D007290 8.9e-09 64.3 131 36.6
AagrBONN_evm.TU.Sc2ySwM_340.252 Anthoceros agrestis HOM05D005924 ORTHO05D007290 5.8e-08 61.6 107 41.1
C09p49910 Brassica napus HOM05D005924 ORTHO05D007290 6.4e-07 58.2 44 63.6
PSO210G6050 Papaver somniferum HOM05D000045 ORTHO05D000067 9.2e-06 54.3 96 40.6


User provided reference genes

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