Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04400 Striga asiatica HOM05D000004 ORTHO05D000563 6.4e-162 573.9 274 100.0
SGA_v2.0_scaffold98G29414 Striga asiatica HOM05D012397 ORTHO05D000002 2.5e-25 120.2 238 36.6
ECA233G2099 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.0e-21 105.9 234 32.9
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 1.2e-19 101.3 256 30.9
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 1.2e-19 101.3 256 30.9
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 3.6e-19 99.8 356 28.7
Rhsim04G0049200 Rhododendron simsii HOM05D000004 ORTHO05D000563 3.6e-19 99.8 256 30.9
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.6e-19 99.8 256 30.5
ECA248G0299 Erigeron canadensis HOM05D000006 ORTHO05D000091 6.1e-19 99.0 260 32.7
ECA240G4601 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.9e-18 96.3 241 32.8
Sabra15G0032500 Salix brachista HOM05D004254 ORTHO05D000563 5.1e-18 95.9 283 28.6
ECA240G1927 Erigeron canadensis HOM05D000145 ORTHO05D000115 1.1e-17 94.7 263 30.8
PGR102G1331 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-17 94.7 263 31.2
Sabra16G0279800 Salix brachista HOM05D000013 ORTHO05D000002 1.5e-17 94.4 191 33.5
Rhsim02G0208700 Rhododendron simsii HOM05D000004 ORTHO05D000563 1.9e-17 94.0 177 36.7
Atru.chr9.1417 Acer truncatum HOM05D000004 ORTHO05D000563 3.3e-17 93.2 126 42.1
Rhsim06G0081400 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.3e-17 93.2 193 33.2
SGA_v2.0_scaffold834G53653 Striga asiatica HOM05D000004 ORTHO05D000002 3.3e-17 93.2 176 37.5
Rhsim04G0098200 Rhododendron simsii HOM05D000004 ORTHO05D000563 4.3e-17 92.8 261 28.7
SGA_v2.0_scaffold142G35703 Striga asiatica HOM05D000004 ORTHO05D000002 5.7e-17 92.4 178 34.3
Rhsim02G0160700 Rhododendron simsii HOM05D000004 ORTHO05D000563 7.4e-17 92.0 177 35.6
PSO161G0062 Papaver somniferum HOM05D000004 ORTHO05D000002 9.7e-17 91.7 158 34.8
PGR031G3219 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-16 91.3 225 32.9
PGR102G3222 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-16 90.9 263 31.2
PSO675G1206 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-16 90.5 158 34.2
PSO675G3106 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-16 90.5 158 34.2
FvH4_4g08352 Fragaria vesca HOM05D000004 ORTHO05D000002 2.8e-16 90.1 291 28.5
PSO063G4042 Papaver somniferum HOM05D000004 ORTHO05D000002 2.8e-16 90.1 146 34.9
PSO478G0935 Papaver somniferum HOM05D000004 ORTHO05D000002 2.8e-16 90.1 158 34.2
PGR004G1008 Punica granatum HOM05D000004 ORTHO05D000002 2.8e-16 90.1 128 40.6
PSO478G0516 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-16 89.4 158 34.2
PSO675G6845 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-16 89.4 158 33.5
Rhsim13G0219800 Rhododendron simsii HOM05D000004 ORTHO05D000563 8.2e-16 88.6 298 29.2
Hma1.2p1_2925F.1_g330460 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.1e-15 88.2 99 42.4
SGA_v2.0_scaffold366G50025 Striga asiatica HOM05D000004 ORTHO05D000002 1.1e-15 88.2 104 42.3
PSO017G5027 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-15 87.8 239 29.3
RhsimUnG0230800 Rhododendron simsii HOM05D000004 ORTHO05D000563 1.4e-15 87.8 300 29.7
Sabra19G0020900 Salix brachista HOM05D000004 ORTHO05D000002 1.4e-15 87.8 140 39.3
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 1.8e-15 87.4 168 35.7
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 1.8e-15 87.4 168 35.7
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 1.8e-15 87.4 168 35.7
BolC3t20667H Brassica oleracea HOM05D000004 ORTHO05D000563 2.4e-15 87.0 233 30.0
SabraUnG0000900 Salix brachista HOM05D000004 ORTHO05D000002 3.1e-15 86.7 147 38.1
PGR031G1659 Punica granatum HOM05D000004 ORTHO05D000002 4.1e-15 86.3 263 31.2
Sp1g29630 Schrenkiella parvula HOM05D000004 ORTHO05D000002 4.1e-15 86.3 288 29.5
ECA238G1641 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-15 85.9 276 29.3
Sabra19G0021900 Salix brachista HOM05D000004 ORTHO05D000002 5.3e-15 85.9 140 38.6
PSO384G2288 Papaver somniferum HOM05D000004 ORTHO05D000002 6.9e-15 85.5 144 33.3
Rhsim07G0165900 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.9e-15 85.5 318 29.6
TWI09G0867 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.9e-15 85.5 126 38.9
SGA_v2.0_scaffold217G42416 Striga asiatica HOM05D000004 ORTHO05D000002 1.2e-14 84.7 228 32.5
PSO724G0202 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-14 84.3 158 32.9
PGR134G0003 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-14 84.3 102 46.1
Rhsim06G0029600 Rhododendron simsii HOM05D000004 ORTHO05D000563 2.0e-14 84.0 255 29.4
BolC6t35188H Brassica oleracea HOM05D000004 ORTHO05D000563 2.6e-14 83.6 137 32.1
LjContig00141g0019718 Lotus japonicus HOM05D000004 ORTHO05D000002 2.6e-14 83.6 282 30.1
TWI59G0527 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.4e-14 83.2 154 32.5
ECA246G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.5e-14 82.8 126 37.3
PSO063G7638 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-14 82.0 138 37.0
ECA246G2687 Erigeron canadensis HOM05D000321 ORTHO05D000002 1.0e-13 81.6 260 30.0
PSO063G1221 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-13 81.6 152 36.2
PSO210G3864 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-13 80.5 273 27.5
PSO210G5884 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-13 80.1 159 34.6
PSO675G4320 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-13 80.1 140 37.1
PGR119G1429 Punica granatum HOM05D000004 ORTHO05D000002 6.5e-13 79.0 238 29.0
PSO801G0002 Papaver somniferum HOM05D000004 ORTHO05D000002 8.5e-13 78.6 257 28.0
Rhsim09G0023400 Rhododendron simsii HOM05D000004 ORTHO05D000563 1.1e-12 78.2 103 44.7
Prupe.5G246300 Prunus persica HOM05D000004 ORTHO05D000002 5.5e-12 75.9 121 36.4
PSO017G2500 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-12 75.5 287 26.5
Rhsim05G0179000 Rhododendron simsii HOM05D011528 ORTHO05D015218 7.2e-12 75.5 216 27.8
ECA246G4319 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.4e-12 75.1 100 41.0
PSO423G0076 Papaver somniferum HOM05D000004 ORTHO05D000002 9.4e-12 75.1 174 28.7
CiPaw.14G083400 Carya illinoinensis HOM05D000004 ORTHO05D000563 1.6e-11 74.3 225 28.9
PSO170G4796 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-11 74.3 174 28.7
PSO832G0610 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-11 73.2 283 25.1
Sp7g08750 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.6e-11 73.2 206 28.6
Atru.chr6.368 Acer truncatum HOM05D000004 ORTHO05D000563 4.7e-11 72.8 224 30.8
BolC9t54975H Brassica oleracea HOM05D000004 ORTHO05D000002 4.7e-11 72.8 254 24.8
Thhalv10028087m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 4.7e-11 72.8 97 35.1
PSO067G0006 Papaver somniferum HOM05D000004 ORTHO05D000002 4.7e-11 72.8 283 25.1
PSO782G4047 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-11 72.4 283 25.1
ECA236G0673 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.9e-11 72.0 177 27.7
PSO339G1513 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-10 71.2 174 28.2
Thhalv10003071m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 1.8e-10 70.9 73 46.6
PSO063G1387 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-10 70.9 283 24.4
SHI02773 Sapria himalayana HOM05D000004 ORTHO05D000563 1.8e-10 70.9 52 59.6
PSO384G1745 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-10 70.5 283 24.0
TWI60G1627 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.3e-10 70.5 116 33.6
Thhalv10012009m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 3.0e-10 70.1 95 38.9
TAR143G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000563 3.0e-10 70.1 143 35.0
Thhalv10019697m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 5.1e-10 69.3 89 41.6
BcaC08g47040 Brassica carinata HOM05D000004 ORTHO05D000563 6.7e-10 68.9 129 34.1
PSO356G0054 Papaver somniferum HOM05D000004 ORTHO05D000002 6.7e-10 68.9 108 38.9
SHI09745 Sapria himalayana HOM05D000019 ORTHO05D000002 6.7e-10 68.9 76 43.4
TPR.G27212 Trifolium pratense HOM05D035450 ORTHO05D010126 8.8e-10 68.6 111 35.1
Thhalv10023123m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 1.1e-09 68.2 100 38.0
ECA246G2782 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-09 67.8 98 38.8
Thhalv10009839m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 1.5e-09 67.8 68 47.1
Actinidia04586 Actinidia chinensis HOM05D000004 ORTHO05D000002 2.0e-09 67.4 202 30.2
BolC7t43890H Brassica oleracea HOM05D000004 ORTHO05D000563 2.0e-09 67.4 71 39.4
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-09 67.4 145 33.8
Thhalv10012218m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 2.6e-09 67.0 104 35.6
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 3.3e-09 66.6 163 32.5
PSO170G0021 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-09 66.2 204 31.4
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 4.4e-09 66.2 119 33.6
Actinidia03258 Actinidia chinensis HOM05D057492 ORTHO05D000563 5.7e-09 65.9 73 41.1
SGA_v2.0_scaffold28G12022 Striga asiatica HOM05D000512 ORTHO05D001326 5.7e-09 65.9 167 34.1
PSO173G0122 Papaver somniferum HOM05D000004 ORTHO05D000002 7.4e-09 65.5 102 38.2
Thhalv10002819m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 1.3e-08 64.7 76 39.5
RhsimUnG0129600 Rhododendron simsii HOM05D031804 ORTHO05D000563 1.7e-08 64.3 107 32.7
Thhalv10016056m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 2.2e-08 63.9 62 43.5
BolC2t07546H Brassica oleracea HOM05D000004 ORTHO05D000563 2.8e-08 63.5 109 33.0
Rhsim03G0265700 Rhododendron simsii HOM05D031804 ORTHO05D000563 3.7e-08 63.2 101 34.7
Thhalv10000656m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 4.8e-08 62.8 94 36.2
SGA_v2.0_scaffold64G22084 Striga asiatica HOM05D000324 ORTHO05D000002 4.8e-08 62.8 204 27.9
Thhalv10027485m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 6.3e-08 62.4 68 45.6
Thhalv10015528m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 8.2e-08 62.0 70 40.0
RhsimUnG0084300 Rhododendron simsii HOM05D011528 ORTHO05D000563 8.2e-08 62.0 126 28.6
PGR142G1090 Punica granatum HOM05D000004 ORTHO05D000002 1.8e-07 60.8 104 37.5
PSO339G3112 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-07 60.5 96 33.3
QL09p008068 Quercus lobata HOM05D000004 ORTHO05D009660 2.4e-07 60.5 75 37.3
Thecc.05G102300 Theobroma cacao HOM05D000004 ORTHO05D000563 3.1e-07 60.1 98 34.7
Rhsim09G0085000 Rhododendron simsii HOM05D000004 ORTHO05D000563 4.1e-07 59.7 274 27.7
Hma1.2p1_0314F.1_g122100 Hydrangea macrophylla HOM05D000004 ORTHO05D009927 6.9e-07 58.9 114 30.7
Hund23938 Selenicereus undatus HOM05D000004 ORTHO05D000563 6.9e-07 58.9 127 30.7
Prupe.7G034800 Prunus persica HOM05D000004 ORTHO05D000563 1.2e-06 58.2 97 34.0
Hund20088 Selenicereus undatus HOM05D000004 ORTHO05D000563 1.2e-06 58.2 64 46.9
Thhalv10019653m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 2.0e-06 57.4 64 39.1
Rhsim08G0083200 Rhododendron simsii HOM05D003191 ORTHO05D003656 2.6e-06 57.0 71 36.6
Sabra11G0010700 Salix brachista HOM05D000004 ORTHO05D009927 2.6e-06 57.0 151 29.8
BolC2t10054H Brassica oleracea HOM05D000004 ORTHO05D000563 3.4e-06 56.6 68 41.2
Hund10392 Selenicereus undatus HOM05D013854 ORTHO05D000563 3.4e-06 56.6 94 31.9
PSO781G0180 Papaver somniferum HOM05D000004 ORTHO05D000002 4.5e-06 56.2 205 26.3
Rhsim10G0091100 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.5e-06 56.2 74 43.2
SGA_v2.0_scaffold370G50112 Striga asiatica HOM05D000004 ORTHO05D000563 5.9e-06 55.8 40 67.5
ECA233G5372 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.7e-06 55.5 100 31.0
Rhsim10G0002800 Rhododendron simsii HOM05D000792 ORTHO05D001021 7.7e-06 55.5 69 40.6
Sp5g17530 Schrenkiella parvula HOM05D000004 ORTHO05D000563 7.7e-06 55.5 181 27.1
SGA_v2.0_scaffold203G41508 Striga asiatica HOM05D012397 ORTHO05D000002 7.7e-06 55.5 64 43.8


User provided reference genes

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