Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04360 Striga asiatica HOM05D011185 ORTHO05D010595 0.0e+00 1463.0 714 100.0
SGA_v2.0_scaffold24G10254 Striga asiatica HOM05D011185 ORTHO05D010595 3.1e-208 729.2 754 56.4
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 1.7e-145 520.8 728 45.5
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 1.1e-64 252.3 402 42.0
SGA_v2.0_scaffold1G00255 Striga asiatica HOM05D011185 ORTHO05D010595 4.5e-58 230.3 418 39.5
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 1.5e-53 215.3 404 39.4
SGA_v2.0_scaffold1G00259 Striga asiatica HOM05D011185 ORTHO05D010595 6.6e-41 173.3 384 37.2
SGA_v2.0_scaffold130G34213 Striga asiatica HOM05D030202 ORTHO05D010595 4.3e-40 170.6 378 32.5
SGA_v2.0_scaffold152G36797 Striga asiatica HOM05D011185 ORTHO05D010595 2.8e-39 167.9 350 34.9
SGA_v2.0_scaffold366G50043 Striga asiatica HOM05D011185 ORTHO05D010595 3.7e-36 157.5 349 36.1
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 4.9e-36 157.1 400 33.5
SGA_v2.0_scaffold117G32318 Striga asiatica HOM05D011185 ORTHO05D010595 1.1e-35 156.0 373 34.0
SGA_v2.0_scaffold20G09149 Striga asiatica HOM05D011185 ORTHO05D010595 3.2e-35 154.5 374 33.2
SGA_v2.0_scaffold40G15666 Striga asiatica HOM05D011185 ORTHO05D010595 3.2e-35 154.5 345 35.9
SGA_v2.0_scaffold181G39793 Striga asiatica HOM05D017978 ORTHO05D010595 3.1e-30 137.9 336 32.7
SGA_v2.0_scaffold181G39784 Striga asiatica HOM05D017978 ORTHO05D010595 2.2e-28 131.7 284 37.0
SGA_v2.0_scaffold181G39796 Striga asiatica HOM05D017978 ORTHO05D010595 4.1e-27 127.5 335 32.5
SGA_v2.0_scaffold181G39794 Striga asiatica HOM05D017978 ORTHO05D010595 5.6e-24 117.1 362 29.8
SGA_v2.0_scaffold100G29617 Striga asiatica HOM05D012911 ORTHO05D010595 1.6e-23 115.5 401 26.9
SGA_v2.0_scaffold100G29621 Striga asiatica HOM05D012911 ORTHO05D010595 1.8e-22 112.1 302 31.8
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 5.2e-22 110.5 279 32.3
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 9.9e-21 106.3 258 32.9
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.2e-20 105.1 362 29.0
SGA_v2.0_scaffold89G27539 Striga asiatica HOM05D011185 ORTHO05D010595 3.8e-20 104.4 271 31.0
SGA_v2.0_scaffold100G29662 Striga asiatica HOM05D012911 ORTHO05D010595 1.4e-19 102.4 247 30.8
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 2.7e-18 98.2 359 28.4
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.7e-18 98.2 286 29.4
SGA_v2.0_scaffold7G04003 Striga asiatica HOM05D012911 ORTHO05D010595 4.6e-18 97.4 263 30.8
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 1.7e-17 95.5 340 28.8
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 3.0e-17 94.7 356 27.5
SGA_v2.0_scaffold84G26560 Striga asiatica HOM05D012911 ORTHO05D010595 5.1e-17 94.0 270 30.4
SGA_v2.0_scaffold84G26553 Striga asiatica HOM05D012911 ORTHO05D010595 8.7e-17 93.2 268 31.3
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 1.1e-16 92.8 258 29.8
SGA_v2.0_scaffold46G17352 Striga asiatica HOM05D037070 ORTHO05D405361 1.5e-16 92.4 124 46.8
SGA_v2.0_scaffold7G03939 Striga asiatica HOM05D012911 ORTHO05D010595 1.5e-16 92.4 277 28.5
SGA_v2.0_scaffold89G27576 Striga asiatica HOM05D037070 ORTHO05D007669 1.5e-16 92.4 124 46.8
SGA_v2.0_scaffold104G30184 Striga asiatica HOM05D037070 ORTHO05D404193 1.9e-16 92.0 124 46.8
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.3e-16 90.1 289 30.1
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 7.3e-16 90.1 282 30.1
SGA_v2.0_scaffold130G34210 Striga asiatica HOM05D030202 ORTHO05D404626 1.8e-14 85.5 180 34.4
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 3.1e-14 84.7 275 26.9
SGA_v2.0_scaffold130G34211 Striga asiatica HOM05D030202 ORTHO05D403157 2.6e-13 81.6 178 35.4
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 9.9e-13 79.7 276 29.3
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 4.9e-12 77.4 268 31.7
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-11 76.3 277 28.2
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 1.1e-11 76.3 282 27.3
Gohir.D10G241000 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-11 76.3 360 24.4
TWI53G1032 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.1e-11 76.3 276 27.2
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 1.4e-11 75.9 215 32.1
Peaxi162Scf00009g02613 Petunia axillaris HOM05D000007 ORTHO05D000017 1.9e-11 75.5 258 28.7
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 2.4e-11 75.1 270 28.1
Gohir.A10G227500 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.2e-11 74.3 350 24.6
Gohir.D10G241008 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.3e-11 73.2 360 23.9
SalBow6G1338 Salvia bowleyana HOM05D012950 ORTHO05D000039 9.3e-11 73.2 261 25.3
TWI81G0699 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 9.3e-11 73.2 286 27.6
Peaxi162Scf00231g00246 Petunia axillaris HOM05D000007 ORTHO05D000017 1.2e-10 72.8 541 22.6
AUR62014756 Chenopodium quinoa HOM05D000007 ORTHO05D000017 6.0e-10 70.5 585 23.1
SGA_v2.0_scaffold39G15154 Striga asiatica HOM05D012724 ORTHO05D010595 7.9e-10 70.1 288 27.4
Gorai.011G276900 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.0e-09 69.7 352 23.3
SGA_v2.0_scaffold1G00265 Striga asiatica HOM05D017978 ORTHO05D010595 1.0e-09 69.7 190 32.6
PGSC0003DMG400045879 Solanum tuberosum HOM05D013992 ORTHO05D011565 1.3e-09 69.3 159 30.2
CiPaw.04G017800 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.8e-09 68.9 230 27.8
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.8e-09 68.9 242 30.2
SGA_v2.0_scaffold2492G54133 Striga asiatica HOM05D000007 ORTHO05D000039 3.9e-09 67.8 271 25.5
Gorai.011G274400 Gossypium raimondii HOM05D000007 ORTHO05D000039 6.7e-09 67.0 366 23.2
COL.COLO4_26961 Corchorus olitorius HOM05D000007 ORTHO05D013309 8.7e-09 66.6 201 29.9
Gorai.011G276700 Gossypium raimondii HOM05D000007 ORTHO05D000039 8.7e-09 66.6 291 24.4
TWI53G1885 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 8.7e-09 66.6 329 22.5
Gohir.D10G238608 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-08 66.2 366 23.5
Haze_03184 Corylus avellana HOM05D000007 ORTHO05D000039 1.5e-08 65.9 325 24.0
MSTRG.3214 Avicennia marina HOM05D000007 ORTHO05D000039 1.9e-08 65.5 284 25.0
SGA_v2.0_scaffold7G04012 Striga asiatica HOM05D000449 ORTHO05D010595 1.9e-08 65.5 245 28.2
Eucgr.H02734 Eucalyptus grandis HOM05D000007 ORTHO05D000017 2.5e-08 65.1 136 31.6
Eucgr.H02735 Eucalyptus grandis HOM05D000007 ORTHO05D000017 3.3e-08 64.7 126 34.1
Medtr4g007940 Medicago truncatula HOM05D000007 ORTHO05D000039 3.3e-08 64.7 265 23.0
TWI14G1098 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.3e-08 64.3 303 26.1
Cfa007606 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.6e-08 63.9 239 28.0
Peaxi162Scf00231g00116 Petunia axillaris HOM05D000007 ORTHO05D000017 5.6e-08 63.9 185 28.1
CiPaw.03G025900 Carya illinoinensis HOM05D000007 ORTHO05D000039 9.6e-08 63.2 278 24.5
FvH4_2g08290 Fragaria vesca HOM05D000007 ORTHO05D000017 9.6e-08 63.2 132 31.1
FAN24G0304 Fragaria x ananassa HOM05D000007 ORTHO05D000017 9.6e-08 63.2 132 31.1
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 9.6e-08 63.2 366 23.2
FAN02G3812 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.3e-07 62.8 133 31.6
Gorai.008G098100 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.3e-07 62.8 273 27.8
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 1.3e-07 62.8 278 24.1
Peaxi162Scf00009g02530 Petunia axillaris HOM05D000007 ORTHO05D000017 1.3e-07 62.8 144 27.1
ECA233G2501 Erigeron canadensis HOM05D000007 ORTHO05D000017 1.6e-07 62.4 165 31.5
Gohir.D12G088200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.6e-07 62.4 274 28.1
MD17G1124300 Malus domestica HOM05D000007 ORTHO05D000017 1.6e-07 62.4 132 33.3
Solyc04g063415.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.6e-07 62.4 174 31.0
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.6e-07 62.4 174 31.0
PSO461G0001 Papaver somniferum HOM05D000007 ORTHO05D000017 2.1e-07 62.0 253 24.1
Sopen04g026370 Solanum pennellii HOM05D000007 ORTHO05D000039 2.1e-07 62.0 131 32.1
CiPaw.14G019500 Carya illinoinensis HOM05D000007 ORTHO05D000039 2.8e-07 61.6 285 25.3
Haze_05766 Corylus avellana HOM05D000007 ORTHO05D000039 2.8e-07 61.6 233 26.6
Migut.N00093 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.8e-07 61.6 133 31.6
Cfa007561 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.6e-07 61.2 132 31.8
Hma1.2p1_0036F.1_g023680 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 3.6e-07 61.2 328 26.5
Lj1C663T4 Lonicera japonica HOM05D000007 ORTHO05D000039 4.8e-07 60.8 251 27.1
SalBow1G3984 Salvia bowleyana HOM05D037136 ORTHO05D005165 4.8e-07 60.8 273 25.6
Sopen00g007910 Solanum pennellii HOM05D000007 ORTHO05D000039 4.8e-07 60.8 131 32.1
FAN05G3599 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.2e-07 60.5 135 33.3
Peaxi162Scf00009g02529 Petunia axillaris HOM05D000007 ORTHO05D000017 6.2e-07 60.5 135 28.1
BraA06t26112Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-06 59.7 162 32.1
Ciclev10011921m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.1e-06 59.7 252 27.0
Ciclev10027004m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.1e-06 59.7 259 22.8
Sopen04g026360 Solanum pennellii HOM05D000007 ORTHO05D000039 1.1e-06 59.7 132 31.8
Gohir.A12G083765 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.4e-06 59.3 253 27.7
Medtr5g086590 Medicago truncatula HOM05D000007 ORTHO05D000039 1.4e-06 59.3 167 30.5
Sopen00g010140 Solanum pennellii HOM05D000007 ORTHO05D000039 1.4e-06 59.3 174 30.5
CAN.G520.23 Capsicum annuum HOM05D000007 ORTHO05D000017 1.8e-06 58.9 138 31.2
Ciclev10006809m.g Citrus clementina HOM05D000007 ORTHO05D000017 1.8e-06 58.9 148 33.1
Duzib114G0761 Durio zibethinus HOM05D000007 ORTHO05D000039 1.8e-06 58.9 274 25.9
FAN18G2360 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.4e-06 58.5 245 27.8
FAN18G3215 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.4e-06 58.5 245 27.8
BcaC05g28414 Brassica carinata HOM05D000209 ORTHO05D000129 3.1e-06 58.2 160 30.6
C05p44970 Brassica napus HOM05D000209 ORTHO05D000129 3.1e-06 58.2 160 30.6
BolC5t33223H Brassica oleracea HOM05D000209 ORTHO05D000129 3.1e-06 58.2 160 30.6
CAN.G1799.7 Capsicum annuum HOM05D000007 ORTHO05D000017 3.1e-06 58.2 202 29.7
Peaxi162Scf00700g00033 Petunia axillaris HOM05D000007 ORTHO05D000039 3.1e-06 58.2 171 29.2
SGA_v2.0_scaffold24G10256 Striga asiatica HOM05D011185 ORTHO05D406369 3.1e-06 58.2 176 31.2
FAN14G3345 Fragaria x ananassa HOM05D000007 ORTHO05D029474 4.0e-06 57.8 100 34.0
Lj2P997T15 Lonicera japonica HOM05D000007 ORTHO05D000039 4.0e-06 57.8 284 22.9
Cpa.g.sc51.32 Carica papaya HOM05D000007 ORTHO05D000039 5.3e-06 57.4 284 22.2
PGR042G2235 Punica granatum HOM05D000007 ORTHO05D000039 5.3e-06 57.4 257 27.2
A06p31800 Brassica napus HOM05D000171 ORTHO05D000101 6.9e-06 57.0 162 31.5
Ciclev10026927m.g Citrus clementina HOM05D000007 ORTHO05D000039 6.9e-06 57.0 247 24.7
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 6.9e-06 57.0 159 28.9
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 9.0e-06 56.6 248 27.0
Nitab4.5_0017036g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.0e-06 56.6 153 30.1
PGSC0003DMG400039496 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.0e-06 56.6 155 32.3


User provided reference genes

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