Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04344 Striga asiatica HOM05D000033 ORTHO05D399363 2.5e-51 205.3 112 100.0
SGA_v2.0_scaffold51G18735 Striga asiatica HOM05D000033 ORTHO05D001614 2.7e-18 95.5 181 39.2
Cc07_g16010 Coffea canephora HOM05D000033 ORTHO05D001614 6.3e-15 84.3 99 50.5
HanXRQChr15g0471911 Helianthus annuus HOM05D000033 ORTHO05D001614 1.4e-14 83.2 113 48.7
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 1.4e-14 83.2 113 46.0
Oeu002110.2 Olea europaea HOM05D000033 ORTHO05D001614 1.2e-13 80.1 104 46.2
SalBow6G1912 Salvia bowleyana HOM05D000033 ORTHO05D001614 2.0e-13 79.3 182 36.3
SalBow6G6313 Salvia bowleyana HOM05D000033 ORTHO05D001614 2.0e-13 79.3 182 36.3
Dinv19507 Davidia involucrata HOM05D000033 ORTHO05D001614 5.2e-09 64.7 182 31.3
Glyma.06G145500 Glycine max HOM05D000033 ORTHO05D001614 2.0e-08 62.8 161 35.4
Ciclev10024775m.g Citrus clementina HOM05D000033 ORTHO05D001614 4.4e-08 61.6 184 31.0
Hma1.2p1_0375F.1_g138640 Hydrangea macrophylla HOM05D000033 ORTHO05D001614 1.3e-07 60.1 53 60.4
arahy.Tifrunner.gnm1.ann1.N7FSUU Arachis hypogaea HOM05D000033 ORTHO05D001614 1.7e-07 59.7 106 40.6
DCAR_011441 Daucus carota HOM05D000033 ORTHO05D001614 1.7e-07 59.7 55 60.0
Glyma.04G220400 Glycine max HOM05D000033 ORTHO05D001614 2.2e-07 59.3 52 63.5
Lj2A560T65 Lonicera japonica HOM05D000033 ORTHO05D001614 2.2e-07 59.3 52 63.5
DCAR_000997 Daucus carota HOM05D000033 ORTHO05D001614 2.8e-07 58.9 53 60.4
TAR636G2098 Trochodendron aralioides HOM05D000053 ORTHO05D000448 8.3e-07 57.4 114 42.1
Phvul.009G140500 Phaseolus vulgaris HOM05D000033 ORTHO05D001614 1.1e-06 57.0 52 59.6
Atru.chr4.390 Acer truncatum HOM05D000033 ORTHO05D001614 1.4e-06 56.6 53 56.6
arahy.Tifrunner.gnm1.ann1.WWX9VA Arachis hypogaea HOM05D000033 ORTHO05D001614 1.4e-06 56.6 54 61.1
CSS0006075 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D001614 1.4e-06 56.6 52 57.7
Zm00001eb327990 Zea mays HOM05D000033 ORTHO05D001614 1.4e-06 56.6 66 48.5
Ca_30346_v3 Cicer arietinum L. HOM05D000053 ORTHO05D000448 4.1e-06 55.1 113 36.3
Migut.H02415 Erythranthe guttata HOM05D000033 ORTHO05D001614 4.1e-06 55.1 184 28.8
VMungo1309G0168 Vigna mungo HOM05D000033 ORTHO05D001614 4.1e-06 55.1 52 57.7
Actinidia33366 Actinidia chinensis HOM05D000033 ORTHO05D001614 7.0e-06 54.3 53 56.6
Ciclev10003386m.g Citrus clementina HOM05D000053 ORTHO05D000035 7.0e-06 54.3 112 42.0
PGR119G0163 Punica granatum HOM05D000033 ORTHO05D001614 7.0e-06 54.3 67 43.3
Thecc.07G121200 Theobroma cacao HOM05D000053 ORTHO05D000035 7.0e-06 54.3 113 37.2


User provided reference genes

Program Settings