Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 3.3e-101 371.7 186 100.0
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 6.9e-67 257.7 190 73.7
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 5.1e-62 241.5 187 67.4
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 6.9e-59 231.1 185 63.8
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 2.0e-58 229.6 191 68.1
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 5.9e-58 228.0 195 62.6
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 1.3e-57 226.9 189 65.1
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 2.9e-57 225.7 187 63.6
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 3.8e-57 225.3 188 64.4
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 8.5e-57 224.2 187 62.6
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 1.4e-56 223.4 185 61.6
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 2.5e-56 222.6 189 61.4
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 2.5e-56 222.6 189 61.4
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.5e-56 222.6 188 64.4
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.5e-56 222.6 188 64.4
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 3.2e-56 222.2 187 63.1
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 7.2e-56 221.1 190 58.4
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 7.2e-56 221.1 187 62.6
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 1.2e-55 220.3 191 58.1
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 1.2e-55 220.3 191 60.2
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 1.6e-55 219.9 187 61.0
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 1.6e-55 219.9 187 62.0
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 2.7e-55 219.2 191 59.2
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 4.7e-55 218.4 190 61.1
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 4.7e-55 218.4 187 61.0
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 6.1e-55 218.0 191 62.8
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 7.9e-55 217.6 191 60.7
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 1.4e-54 216.9 190 57.9
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 2.3e-54 216.1 188 61.2
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 3.0e-54 215.7 191 58.6
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 3.9e-54 215.3 191 59.7
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 6.7e-54 214.5 191 56.0
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 8.8e-54 214.2 187 61.0
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 1.1e-53 213.8 194 57.2
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 1.5e-53 213.4 205 54.1
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 1.5e-53 213.4 188 60.1
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 1.5e-53 213.4 188 62.2
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 3.3e-53 212.2 192 58.9
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 4.4e-53 211.8 202 55.4
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 4.4e-53 211.8 191 57.1
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 9.7e-53 210.7 188 56.9
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 9.7e-53 210.7 187 59.4
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 1.3e-52 210.3 189 62.4
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 1.3e-52 210.3 190 60.5
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 1.3e-52 210.3 192 60.9
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 1.7e-52 209.9 192 57.8
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 2.8e-52 209.1 188 61.2
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 6.3e-52 208.0 187 58.8
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 8.2e-52 207.6 190 57.4
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 1.4e-51 206.8 223 52.9
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 1.4e-51 206.8 189 58.7
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 2.4e-51 206.1 189 59.8
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 3.1e-51 205.7 188 58.0
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 3.1e-51 205.7 189 59.3
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 5.3e-51 204.9 189 58.2
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 5.3e-51 204.9 189 57.1
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 7.0e-51 204.5 175 64.6
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 7.0e-51 204.5 132 78.0
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 1.5e-50 203.4 192 58.3
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 2.0e-50 203.0 148 69.6
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 2.6e-50 202.6 187 57.8
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 5.9e-50 201.4 187 59.9
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 7.7e-50 201.1 187 58.8
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 1.0e-49 200.7 187 59.4
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.0e-49 200.7 187 59.4
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 2.2e-49 199.5 189 56.1
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 2.9e-49 199.1 160 65.0
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 3.8e-49 198.7 191 58.6
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 5.0e-49 198.4 175 61.7
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 1.4e-48 196.8 216 54.6
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 1.4e-48 196.8 191 55.0
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 2.5e-48 196.1 189 56.6
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 4.2e-48 195.3 188 59.0
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 2.1e-47 193.0 188 55.9
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 1.0e-46 190.7 188 57.4
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 1.8e-46 189.9 191 55.0
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 2.3e-46 189.5 134 67.9
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 3.0e-46 189.1 185 55.7
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 3.0e-46 189.1 235 48.5
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 5.2e-46 188.3 185 57.3
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 1.1e-45 187.2 188 54.8
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 7.4e-45 184.5 187 54.5
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 6.3e-44 181.4 134 66.4
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 1.4e-43 180.3 185 54.6
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 1.8e-43 179.9 138 63.8
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 2.4e-43 179.5 138 63.8
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 2.4e-43 179.5 187 52.9
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 4.1e-43 178.7 185 51.9
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 2.6e-42 176.0 133 66.9
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.7e-41 173.3 209 49.3
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 3.2e-40 169.1 162 57.4
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 9.4e-40 167.5 132 65.2
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 9.4e-40 167.5 151 60.9
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.2e-39 167.2 151 62.3
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 1.5e-37 160.2 191 49.7
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 2.0e-37 159.8 152 56.6
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 3.3e-37 159.1 207 47.3
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 2.8e-36 156.0 99 73.7
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 2.8e-36 156.0 132 65.2
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 2.0e-34 149.8 235 41.3
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 1.3e-33 147.1 91 74.7
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 1.5e-32 143.7 117 63.2
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 9.4e-32 141.0 126 61.9
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 4.8e-28 128.6 74 77.0
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 1.8e-27 126.7 190 44.2
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 7.7e-26 121.3 99 64.6
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 1.0e-22 110.9 222 36.9
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 2.2e-20 103.2 199 36.2
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.8e-19 100.1 122 53.3
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.8e-19 100.1 122 53.3
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 3.9e-17 92.4 186 34.9
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 3.1e-14 82.8 115 50.4
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 1.4e-11 73.9 111 44.1
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 1.6e-07 60.5 55 50.9
Cre09.g401150 Chlamydomonas reinhardtii HOM05D006936 ORTHO05D008273 2.8e-07 59.7 133 30.8
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 2.8e-07 59.7 66 56.1


User provided reference genes

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