Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04318 Striga asiatica HOM05D002166 ORTHO05D002634 1.7e-94 349.4 178 100.0
GSVIVG01037646001 Vitis vinifera HOM05D002166 ORTHO05D002634 2.0e-15 86.7 57 71.9
Migut.H01828 Erythranthe guttata HOM05D002166 ORTHO05D002634 8.5e-14 81.3 56 67.9
Hma1.2p1_0673F.1_g201340 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 8.5e-14 81.3 57 68.4
Ciclev10007979m.g Citrus clementina HOM05D002166 ORTHO05D002634 1.4e-13 80.5 57 71.9
Duzib268G1828 Durio zibethinus HOM05D002166 ORTHO05D002634 1.9e-13 80.1 56 67.9
SGA_v2.0_scaffold18G08536 Striga asiatica HOM05D002166 ORTHO05D002634 5.5e-13 78.6 58 67.2
CSS0030432 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 7.2e-13 78.2 53 67.9
COL.COLO4_09660 Corchorus olitorius HOM05D002166 ORTHO05D002634 7.2e-13 78.2 56 66.1
Dinv22263 Davidia involucrata HOM05D002166 ORTHO05D002634 9.4e-13 77.8 58 67.2
Manes.15G072000 Manihot esculenta HOM05D002166 ORTHO05D002634 9.4e-13 77.8 57 68.4
Nn1g03540 Nelumbo nucifera HOM05D002166 ORTHO05D002634 9.4e-13 77.8 56 66.1
Thecc.07G037300 Theobroma cacao HOM05D002166 ORTHO05D002634 1.2e-12 77.4 56 66.1
TWI38G0482 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 1.2e-12 77.4 56 66.1
Dinv40752 Davidia involucrata HOM05D002166 ORTHO05D002634 2.7e-12 76.3 56 62.5
Oeu042937.1 Olea europaea HOM05D002166 ORTHO05D002634 3.6e-12 75.9 57 63.2
Cc05_g13700 Coffea canephora HOM05D002166 ORTHO05D002634 4.7e-12 75.5 56 60.7
Eucgr.F00765 Eucalyptus grandis HOM05D002166 ORTHO05D002634 4.7e-12 75.5 55 63.6
PGR083G0038 Punica granatum HOM05D002166 ORTHO05D002634 6.1e-12 75.1 50 72.0
MSTRG.15149 Avicennia marina HOM05D002166 ORTHO05D002634 1.0e-11 74.3 57 66.7
MBI02_g24810_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 1.4e-11 73.9 57 63.2
Cpa.g.sc97.2 Carica papaya HOM05D002166 ORTHO05D002634 2.3e-11 73.2 56 66.1
Manes.03G129200 Manihot esculenta HOM05D002166 ORTHO05D002634 2.3e-11 73.2 56 64.3
Oeu007581.1 Olea europaea HOM05D002166 ORTHO05D002634 2.3e-11 73.2 91 48.4
TAR626G0812 Trochodendron aralioides HOM05D002166 ORTHO05D002634 2.3e-11 73.2 56 60.7
RhsimUnG0250700 Rhododendron simsii HOM05D002166 ORTHO05D002634 3.0e-11 72.8 57 59.6
Aqoxy1G02169 Aquilegia oxysepala HOM05D002166 ORTHO05D002634 5.2e-11 72.0 55 60.0
Gohir.D13G143100 Gossypium hirsutum HOM05D002166 ORTHO05D002634 5.2e-11 72.0 55 61.8
Gorai.013G160000 Gossypium raimondii HOM05D002166 ORTHO05D002634 5.2e-11 72.0 55 61.8
Lj8A169T85 Lonicera japonica HOM05D002166 ORTHO05D002634 5.2e-11 72.0 53 60.4
DCAR_016704 Daucus carota HOM05D002166 ORTHO05D002634 6.7e-11 71.6 56 58.9
MSTRG.14434 Avicennia marina HOM05D002166 ORTHO05D002634 8.8e-11 71.2 57 59.6
Gohir.A13G138300 Gossypium hirsutum HOM05D002166 ORTHO05D002634 8.8e-11 71.2 55 61.8
THA.LOC104817854 Tarenaya hassleriana HOM05D002166 ORTHO05D002634 8.8e-11 71.2 55 63.6
CSS0020014 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 1.1e-10 70.9 50 64.0
Dinv13887 Davidia involucrata HOM05D002166 ORTHO05D002634 1.1e-10 70.9 56 58.9
Gohir.A01G079400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 1.1e-10 70.9 56 64.3
Gohir.D01G066400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 1.1e-10 70.9 56 64.3
PSO541G1388 Papaver somniferum HOM05D002166 ORTHO05D002634 1.1e-10 70.9 57 59.6
DCAR_022561 Daucus carota HOM05D002166 ORTHO05D002634 2.0e-10 70.1 56 55.4
Gohir.D05G369400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 2.0e-10 70.1 56 57.1
Gorai.009G438100 Gossypium raimondii HOM05D002166 ORTHO05D002634 3.3e-10 69.3 56 57.1
Cfa020346 Carpinus fangiana HOM05D002166 ORTHO05D002634 4.4e-10 68.9 56 62.5
Duzib213G0813 Durio zibethinus HOM05D002166 ORTHO05D002634 4.4e-10 68.9 56 58.9
RcHm_v2.0_Chr5g0039421 Rosa chinensis HOM05D002166 ORTHO05D002634 5.7e-10 68.6 56 67.9
vmacro09716 Vaccinium macrocarpon HOM05D002166 ORTHO05D002634 5.7e-10 68.6 57 59.6
Gohir.A04G016800 Gossypium hirsutum HOM05D002166 ORTHO05D002634 7.4e-10 68.2 56 55.4
Nitab4.5_0011129g0010 Nicotiana tabacum HOM05D002166 ORTHO05D002634 7.4e-10 68.2 55 58.2
Hma1.2p1_2464F.1_g322600 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 9.7e-10 67.8 57 54.4
Hma1.2p1_3160F.1_g333440 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 9.7e-10 67.8 57 54.4
CiPaw.11G189200 Carya illinoinensis HOM05D002166 ORTHO05D002634 1.3e-09 67.4 56 62.5
Nitab4.5_0001913g0130 Nicotiana tabacum HOM05D002166 ORTHO05D002634 1.3e-09 67.4 55 58.2
TAR624G1431 Trochodendron aralioides HOM05D002166 ORTHO05D002634 1.3e-09 67.4 56 58.9
CiPaw.12G129600 Carya illinoinensis HOM05D002166 ORTHO05D002634 1.7e-09 67.0 56 66.1
Haze_09688 Corylus avellana HOM05D002166 ORTHO05D002634 1.7e-09 67.0 55 61.8
Nitab4.5_0000981g0080 Nicotiana tabacum HOM05D002166 ORTHO05D002634 1.7e-09 67.0 56 57.1
Potri.011G090100 Populus trichocarpa HOM05D002166 ORTHO05D002634 1.7e-09 67.0 56 60.7
FvH4_3g22650 Fragaria vesca HOM05D002166 ORTHO05D002634 2.2e-09 66.6 55 67.3
FAN11G2830 Fragaria x ananassa HOM05D002166 ORTHO05D002634 2.2e-09 66.6 55 67.3
FAN16G1047 Fragaria x ananassa HOM05D002166 ORTHO05D002634 2.2e-09 66.6 55 67.3
FAN21G3541 Fragaria x ananassa HOM05D002166 ORTHO05D002634 2.2e-09 66.6 55 67.3
FAN25G0402 Fragaria x ananassa HOM05D002166 ORTHO05D002634 2.2e-09 66.6 55 67.3
Gorai.002G088400 Gossypium raimondii HOM05D002166 ORTHO05D002634 2.2e-09 66.6 56 64.3
vmacro11726 Vaccinium macrocarpon HOM05D002166 ORTHO05D002634 2.2e-09 66.6 55 56.4
Peaxi162Scf00964g00022 Petunia axillaris HOM05D002166 ORTHO05D002634 2.8e-09 66.2 55 60.0
PGSC0003DMG400027878 Solanum tuberosum HOM05D002166 ORTHO05D002634 2.8e-09 66.2 56 55.4
ATR0752G109 Amborella trichopoda HOM05D002166 ORTHO05D002634 3.7e-09 65.9 56 58.9
AL3G34070 Arabidopsis lyrata HOM05D002166 ORTHO05D002634 3.7e-09 65.9 56 57.1
Rhsim06G0216800 Rhododendron simsii HOM05D002166 ORTHO05D002634 3.7e-09 65.9 53 58.5
Sabra16G0235500 Salix brachista HOM05D002166 ORTHO05D002634 4.8e-09 65.5 56 58.9
SEGI_05627 Sequoiadendron giganteum HOM05D002166 ORTHO05D002634 6.3e-09 65.1 83 43.4
Nitab4.5_0006428g0010 Nicotiana tabacum HOM05D002166 ORTHO05D002634 8.2e-09 64.7 56 55.4
PSO675G8999 Papaver somniferum HOM05D002166 ORTHO05D002634 8.2e-09 64.7 57 56.1
Sopen12g001020 Solanum pennellii HOM05D002166 ORTHO05D002634 8.2e-09 64.7 56 53.6
Sp1g37510 Schrenkiella parvula HOM05D002166 ORTHO05D002634 1.4e-08 63.9 55 63.6
EL10Ac4g07812 Beta vulgaris HOM05D002166 ORTHO05D002634 1.8e-08 63.5 57 57.9
Peaxi162Scf01097g00414 Petunia axillaris HOM05D002166 ORTHO05D002634 1.8e-08 63.5 56 55.4
QL08p010329 Quercus lobata HOM05D002166 ORTHO05D002634 1.8e-08 63.5 57 59.6
Hund01993 Selenicereus undatus HOM05D002166 ORTHO05D002634 1.8e-08 63.5 54 55.6
Solyc12g005010.2 Solanum lycopersicum HOM05D002166 ORTHO05D002634 1.8e-08 63.5 56 51.8
Thhalv10011268m.g Eutrema salsugineum HOM05D002166 ORTHO05D002634 2.4e-08 63.2 55 63.6
MBI18_g36060_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 3.1e-08 62.8 66 48.5
Carub.0003s2030 Capsella rubella HOM05D002166 ORTHO05D002634 4.1e-08 62.4 100 42.0
AUR62020445 Chenopodium quinoa HOM05D002166 ORTHO05D002634 4.1e-08 62.4 60 56.7
Sabra11G0086400 Salix brachista HOM05D002166 ORTHO05D002634 5.3e-08 62.0 56 55.4
Sc03g0008590 Simmondsia chinensis HOM05D002166 ORTHO05D002634 5.3e-08 62.0 53 58.5
HPP92_016529 Vanilla planifolia HOM05D002166 ORTHO05D002634 5.3e-08 62.0 56 53.6
GSVIVG01012735001 Vitis vinifera HOM05D002166 ORTHO05D002634 5.3e-08 62.0 57 57.9
AT1G50660 Arabidopsis thaliana HOM05D002166 ORTHO05D002634 7.0e-08 61.6 55 61.8
Prupe.4G212500 Prunus persica HOM05D002166 ORTHO05D002634 7.0e-08 61.6 56 64.3
TWI38G2284 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 7.0e-08 61.6 56 55.4
BcaB07g33506 Brassica carinata HOM05D002166 ORTHO05D002634 1.2e-07 60.8 56 60.7
Sp3g18380 Schrenkiella parvula HOM05D002166 ORTHO05D002634 1.2e-07 60.8 99 42.4
Aa31LG10G3670 Aethionema arabicum HOM05D002166 ORTHO05D002634 1.6e-07 60.5 158 33.5
AL1G58330 Arabidopsis lyrata HOM05D002166 ORTHO05D002634 1.6e-07 60.5 55 60.0
Carub.0001s3970 Capsella rubella HOM05D002166 ORTHO05D002634 1.6e-07 60.5 55 60.0
MSTRG.6918 Avicennia marina HOM05D002166 ORTHO05D002634 2.0e-07 60.1 65 50.8
AT3G20350 Arabidopsis thaliana HOM05D002166 ORTHO05D002634 2.6e-07 59.7 81 44.4
CAN.G1404.1 Capsicum annuum HOM05D002166 ORTHO05D002634 2.6e-07 59.7 56 50.0
Psat2g011000 Pisum sativum HOM05D002166 ORTHO05D002634 2.6e-07 59.7 60 56.7
AUR62015775 Chenopodium quinoa HOM05D002166 ORTHO05D002634 3.5e-07 59.3 43 65.1
CsaV3_3G005040 Cucumis sativus L. HOM05D002166 ORTHO05D002634 3.5e-07 59.3 57 56.1
Ca_06318_v3 Cicer arietinum L. HOM05D002166 ORTHO05D002634 4.5e-07 58.9 56 60.7
Ca_30807_v3 Cicer arietinum L. HOM05D002166 ORTHO05D002634 4.5e-07 58.9 56 60.7
MELO3C025366.2 Cucumis melo HOM05D002166 ORTHO05D002634 4.5e-07 58.9 57 56.1
Lalb_Chr17g0348461 Lupinus albus HOM05D002166 ORTHO05D002634 4.5e-07 58.9 56 57.1
MD03G1201300 Malus domestica HOM05D002166 ORTHO05D002634 4.5e-07 58.9 56 62.5
PGSC0003DMG400022320 Solanum tuberosum HOM05D002166 ORTHO05D002634 4.5e-07 58.9 68 50.0
Zm00001eb431290 Zea mays HOM05D002166 ORTHO05D002634 4.5e-07 58.9 60 53.3
CANSAT11G1162 Cannabis sativa HOM05D002166 ORTHO05D002634 5.9e-07 58.5 55 60.0
CARHR040710 Cardamine hirsuta HOM05D002166 ORTHO05D002634 7.7e-07 58.2 55 60.0
CAN.G337.130 Capsicum annuum HOM05D002166 ORTHO05D002634 1.0e-06 57.8 66 48.5
MD11G1218700 Malus domestica HOM05D002166 ORTHO05D002634 1.0e-06 57.8 56 60.7
Os04g0625000 Oryza sativa ssp. japonica HOM05D002166 ORTHO05D002634 1.0e-06 57.8 50 56.0
Solyc07g064580.3 Solanum lycopersicum HOM05D002166 ORTHO05D002634 1.0e-06 57.8 46 60.9
VMungo0647G1741 Vigna mungo HOM05D002166 ORTHO05D002634 1.3e-06 57.4 56 62.5
Zm00001eb099560 Zea mays HOM05D002166 ORTHO05D002634 1.3e-06 57.4 49 57.1
Sopen07g032770 Solanum pennellii HOM05D002166 ORTHO05D002634 1.7e-06 57.0 46 60.9
BcaC08g43244 Brassica carinata HOM05D002166 ORTHO05D002634 2.2e-06 56.6 56 60.7
A06p02960 Brassica napus HOM05D002166 ORTHO05D002634 2.2e-06 56.6 56 60.7
C06p05920 Brassica napus HOM05D002166 ORTHO05D002634 2.2e-06 56.6 56 60.7
BolC6t35705H Brassica oleracea HOM05D002166 ORTHO05D002634 2.2e-06 56.6 56 60.7
BraA06t23502Z Brassica rapa HOM05D002166 ORTHO05D002634 2.2e-06 56.6 56 60.7
Phvul.006G042900 Phaseolus vulgaris HOM05D002166 ORTHO05D002634 2.2e-06 56.6 56 64.3
TPR.G1145 Trifolium pratense HOM05D002166 ORTHO05D002634 2.2e-06 56.6 56 58.9
ClCG10G005330 Citrullus lanatus HOM05D002166 ORTHO05D002634 2.9e-06 56.2 57 54.4
Duzib170G0116 Durio zibethinus HOM05D002166 ORTHO05D002634 2.9e-06 56.2 56 51.8
Lalb_Chr10g0106961 Lupinus albus HOM05D002166 ORTHO05D002634 2.9e-06 56.2 56 57.1
Potri.004G015800 Populus trichocarpa HOM05D002166 ORTHO05D002634 2.9e-06 56.2 59 49.2
Zm00001eb150970 Zea mays HOM05D002166 ORTHO05D002634 2.9e-06 56.2 78 41.0
Glyma.08G315800 Glycine max HOM05D002166 ORTHO05D002634 3.8e-06 55.8 56 64.3
Zm00001eb070190 Zea mays HOM05D002166 ORTHO05D002634 3.8e-06 55.8 60 51.7
Medtr5g092610 Medicago truncatula HOM05D002166 ORTHO05D002634 6.5e-06 55.1 56 57.1
CARHR096000 Cardamine hirsuta HOM05D002166 ORTHO05D002634 8.5e-06 54.7 54 51.9
Phvul.008G267200 Phaseolus vulgaris HOM05D002166 ORTHO05D002634 8.5e-06 54.7 56 60.7
VMungo0540G1154 Vigna mungo HOM05D002166 ORTHO05D002634 8.5e-06 54.7 56 62.5
Zm00001eb369610 Zea mays HOM05D002166 ORTHO05D002634 8.5e-06 54.7 78 41.0


User provided reference genes

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