Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04316 Striga asiatica HOM05D017085 ORTHO05D026193 5.0e-205 717.6 379 100.0
SGA_v2.0_scaffold4165G54433 Striga asiatica HOM05D017085 ORTHO05D026193 1.4e-66 257.7 228 68.0
SGA_v2.0_scaffold79G25509 Striga asiatica HOM05D017085 ORTHO05D026193 3.2e-50 203.4 310 47.7
SGA_v2.0_scaffold166G38396 Striga asiatica HOM05D017085 ORTHO05D026193 1.7e-43 181.0 173 65.9
SGA_v2.0_scaffold2G01281 Striga asiatica HOM05D017085 ORTHO05D026193 3.2e-26 123.6 115 60.9
CSS0044901 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.0e-16 92.0 161 38.5
Rhsim05G0167100 Rhododendron simsii HOM05D000030 ORTHO05D007344 1.0e-16 92.0 157 38.2
Rhsim08G0036500 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.3e-16 90.9 157 37.6
Cc03_g12020 Coffea canephora HOM05D000030 ORTHO05D000009 3.3e-15 87.0 105 39.0
Rhsim09G0090800 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.3e-15 86.7 248 30.2
Rhsim05G0021400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.4e-13 80.9 122 36.9
Rhsim05G0020900 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.0e-12 77.8 104 40.4
CSS0000197 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.6e-12 75.9 162 37.0
SGA_v2.0_scaffold79G25514 Striga asiatica HOM05D017085 ORTHO05D000006 1.7e-11 74.7 37 97.3
Hma1.2p1_0074F.1_g039110 Hydrangea macrophylla HOM05D000030 ORTHO05D007344 1.9e-10 71.2 105 35.2
COL.COLO4_24257 Corchorus olitorius HOM05D000030 ORTHO05D007344 2.4e-10 70.9 167 32.9
COL.COLO4_37582 Corchorus olitorius HOM05D000030 ORTHO05D007344 7.1e-10 69.3 166 31.9
Rhsim01G0169500 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.1e-10 69.3 194 30.9
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 9.3e-10 68.9 166 31.3
COL.COLO4_24409 Corchorus olitorius HOM05D002632 ORTHO05D002881 9.3e-10 68.9 166 31.3
SHI07448 Sapria himalayana HOM05D000030 ORTHO05D000009 2.7e-09 67.4 115 35.7
RhsimUnG0122000 Rhododendron simsii HOM05D000045 ORTHO05D000009 3.5e-09 67.0 213 29.6
COL.COLO4_06728 Corchorus olitorius HOM05D000030 ORTHO05D007344 4.6e-09 66.6 166 31.3
Dinv22429 Davidia involucrata HOM05D022575 ORTHO05D020547 4.6e-09 66.6 126 31.0
CiPaw.14G091800 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.8e-08 64.7 160 30.6
SHI00319 Sapria himalayana HOM05D000030 ORTHO05D007344 1.8e-08 64.7 100 37.0
SHI16790 Sapria himalayana HOM05D000030 ORTHO05D007344 1.8e-08 64.7 101 38.6
SHI16798 Sapria himalayana HOM05D000030 ORTHO05D000009 1.8e-08 64.7 100 37.0
TWI31G1150 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 3.9e-08 63.5 173 30.6
CiPaw.04G079600 Carya illinoinensis HOM05D000030 ORTHO05D000009 6.7e-08 62.8 151 30.5
CSS0039788 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 8.7e-08 62.4 160 31.2
Dinv20514 Davidia involucrata HOM05D022692 ORTHO05D020547 8.7e-08 62.4 167 31.7
CiPaw.03G205900 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.1e-07 62.0 104 36.5
SHI19978 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-07 62.0 100 35.0
AUR62042243 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.5e-07 61.6 129 31.8
COL.COLO4_22873 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.5e-07 61.6 163 31.3
COL.COLO4_35574 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.5e-07 61.6 163 30.7
SHI03791 Sapria himalayana HOM05D000030 ORTHO05D007344 1.5e-07 61.6 167 33.5
TWI73G0883 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 1.5e-07 61.6 111 34.2
COL.COLO4_36328 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.9e-07 61.2 164 29.9
SHI13597 Sapria himalayana HOM05D000030 ORTHO05D007344 4.3e-07 60.1 100 36.0
TWI81G1001 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 5.6e-07 59.7 103 35.0
SHI29485 Sapria himalayana HOM05D000030 ORTHO05D000009 9.6e-07 58.9 165 31.5
SHI23085 Sapria himalayana HOM05D000030 ORTHO05D007344 1.3e-06 58.5 167 27.5
SGA_v2.0_scaffold11G05594 Striga asiatica HOM05D027498 ORTHO05D007344 1.3e-06 58.5 117 33.3
COL.COLO4_25215 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.6e-06 58.2 166 29.5
COL.COLO4_35746 Corchorus olitorius HOM05D019187 ORTHO05D007344 2.1e-06 57.8 100 35.0
Hma1.2p1_0019F.1_g013840 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.1e-06 57.8 97 32.0
CiPaw.15G111200 Carya illinoinensis HOM05D000030 ORTHO05D000009 3.7e-06 57.0 154 27.9
CSS0000746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 6.2e-06 56.2 160 31.2
CiPaw.04G154800 Carya illinoinensis HOM05D000030 ORTHO05D000009 6.2e-06 56.2 104 35.6
COL.COLO4_33382 Corchorus olitorius HOM05D000030 ORTHO05D000009 6.2e-06 56.2 163 28.2
Gohir.D01G106966 Gossypium hirsutum HOM05D000030 ORTHO05D000009 8.1e-06 55.8 55 45.5
Gorai.002G131300 Gossypium raimondii HOM05D000030 ORTHO05D000009 8.1e-06 55.8 55 45.5
Rhsim01G0135900 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.1e-06 55.8 157 33.1


User provided reference genes

Program Settings