Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 2.0e-180 636.7 662 100.0
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 6.2e-102 375.9 664 80.0
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 4.9e-91 339.7 662 77.6
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 1.2e-84 318.5 662 77.3
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 7.4e-71 272.7 662 74.2
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 4.8e-70 270.0 665 73.8
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 2.4e-69 267.7 662 73.7
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 5.0e-67 260.0 664 71.5
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 1.4e-66 258.5 662 72.8
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.4e-61 241.1 661 71.6
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.4e-61 241.1 661 71.6
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 2.9e-59 234.2 669 68.9
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 5.0e-59 233.4 660 70.5
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 5.0e-59 233.4 666 70.9
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 4.7e-57 226.9 665 70.2
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 6.7e-56 223.0 664 68.8
SGA_v2.0_scaffold68G22967 Striga asiatica HOM05D006250 ORTHO05D007107 2.6e-55 221.1 119 100.0
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 7.4e-55 219.5 666 69.7
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 3.7e-54 217.2 665 69.3
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 1.8e-53 214.9 664 69.6
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 3.1e-53 214.2 664 69.6
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 7.0e-53 213.0 666 69.5
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 1.5e-52 211.8 662 68.3
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 2.0e-52 211.5 609 64.0
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 3.5e-52 210.7 666 69.1
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 4.5e-52 210.3 664 70.0
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 7.7e-52 209.5 667 68.8
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 1.3e-51 208.8 596 74.8
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 1.5e-50 205.3 669 68.5
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 5.5e-50 203.4 665 69.6
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 2.7e-49 201.1 661 69.7
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 3.6e-49 200.7 668 65.3
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 6.1e-49 199.9 666 69.5
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 1.4e-48 198.7 665 68.7
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 5.2e-48 196.8 667 64.8
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 1.1e-47 195.7 606 72.4
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 1.1e-47 195.7 591 74.1
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 2.0e-47 194.9 665 69.2
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 9.7e-47 192.6 588 70.6
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 1.3e-46 192.2 664 67.3
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 1.1e-45 189.1 702 54.4
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 3.1e-45 187.6 603 72.6
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 4.1e-45 187.2 668 64.5
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 4.1e-45 187.2 292 43.5
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 5.3e-45 186.8 293 43.3
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 2.6e-44 184.5 665 68.6
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 3.5e-44 184.1 674 66.8
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 3.5e-44 184.1 603 72.3
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 4.5e-44 183.7 664 69.1
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 1.0e-43 182.6 678 50.3
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 6.5e-43 179.9 666 68.9
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 1.5e-42 178.7 605 60.0
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.5e-42 178.7 300 43.7
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 1.9e-42 178.3 592 74.0
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 2.5e-42 177.9 610 71.8
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 5.5e-42 176.8 238 46.6
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 7.2e-42 176.4 664 66.3
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 2.1e-41 174.9 668 68.0
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 4.7e-41 173.7 285 41.1
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 6.1e-41 173.3 483 86.1
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 8.0e-41 172.9 287 42.9
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.0e-40 172.6 667 56.8
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 2.3e-40 171.4 663 67.6
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 4.0e-40 170.6 664 63.4
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 1.2e-39 169.1 296 41.2
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 3.4e-39 167.5 663 67.4
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 9.8e-39 166.0 291 42.6
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 2.8e-38 164.5 598 70.9
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 3.7e-38 164.1 227 43.6
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 8.3e-38 162.9 563 74.4
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 1.4e-37 162.2 653 65.7
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 2.4e-37 161.4 611 68.7
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 4.1e-37 160.6 673 64.8
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 7.0e-37 159.8 673 64.8
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 9.1e-37 159.5 290 40.7
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 1.2e-36 159.1 664 67.6
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 1.6e-36 158.7 603 69.3
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 7.7e-36 156.4 220 44.5
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 1.3e-35 155.6 292 40.8
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 1.3e-35 155.6 294 38.8
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 1.7e-35 155.2 292 40.8
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 1.7e-35 155.2 666 57.4
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 2.2e-35 154.8 663 67.1
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 3.8e-35 154.1 217 46.1
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 3.8e-35 154.1 215 46.0
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 3.8e-35 154.1 215 46.0
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 3.8e-35 154.1 295 40.0
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 3.8e-35 154.1 663 64.6
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 5.0e-35 153.7 218 44.5
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 8.5e-35 152.9 285 40.7
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 8.5e-35 152.9 285 40.7
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 1.1e-34 152.5 291 40.5
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 4.2e-34 150.6 291 39.2
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 5.5e-34 150.2 219 44.7
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 5.5e-34 150.2 294 39.1
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 5.5e-34 150.2 501 80.2
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 5.5e-34 150.2 289 40.5
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 1.6e-33 148.7 286 37.8
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 2.1e-33 148.3 138 58.0
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 7.0e-29 133.3 267 36.7
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 7.0e-29 133.3 267 37.8
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 1.6e-28 132.1 267 36.7
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 7.7e-28 129.8 599 65.8
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 1.3e-27 129.0 267 37.8
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 1.7e-27 128.6 135 57.0
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 2.3e-27 128.3 663 64.7
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 5.0e-27 127.1 138 50.0
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 7.2e-26 123.2 218 39.0
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 7.2e-26 123.2 218 39.0
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.4e-24 119.0 284 35.6
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 6.8e-24 116.7 653 63.7
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 7.5e-23 113.2 250 36.0
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.7e-22 112.1 92 89.1
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 1.2e-20 105.9 212 34.4
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 2.2e-14 85.1 53 77.4
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 8.3e-14 83.2 96 72.9
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.4e-13 81.6 53 73.6
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 4.1e-13 80.9 87 75.9
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 3.5e-12 77.8 225 30.7
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 1.1e-08 66.2 112 44.6
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 9.8e-07 59.7 81 72.8
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 9.8e-07 59.7 81 72.8
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 2.9e-06 58.2 236 26.3
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 8.3e-06 56.6 81 70.4


User provided reference genes

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