Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 2.4e-110 402.1 198 100.0
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 7.6e-88 327.4 198 79.3
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 2.2e-87 325.9 198 77.8
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 8.4e-87 323.9 198 74.2
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 3.2e-86 322.0 198 75.8
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 6.0e-85 317.8 198 73.2
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 4.3e-83 311.6 199 71.9
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 1.8e-81 306.2 197 70.6
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 1.8e-81 306.2 198 70.2
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 4.4e-80 301.6 198 70.7
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 1.3e-79 300.1 198 71.2
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.7e-79 299.7 198 70.2
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.7e-79 299.7 198 68.7
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 1.7e-79 299.7 198 69.2
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 1.7e-79 299.7 195 68.7
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 4.9e-79 298.1 197 68.5
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 4.9e-79 298.1 198 70.7
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 8.4e-79 297.4 197 69.5
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 1.9e-78 296.2 198 70.7
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 1.9e-78 296.2 197 66.5
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 2.4e-78 295.8 198 66.7
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 5.4e-78 294.7 196 68.4
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 5.4e-78 294.7 198 69.7
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 5.4e-78 294.7 198 67.2
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 9.3e-78 293.9 198 67.2
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 1.2e-77 293.5 196 69.4
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 1.2e-77 293.5 196 69.4
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 1.6e-77 293.1 198 70.7
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 2.1e-77 292.7 196 68.9
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 2.7e-77 292.4 198 68.2
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 2.7e-77 292.4 198 67.7
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 2.7e-77 292.4 196 68.9
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 2.7e-77 292.4 198 66.2
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 3.5e-77 292.0 197 68.0
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 3.5e-77 292.0 198 67.7
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 6.0e-77 291.2 198 67.7
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 6.0e-77 291.2 197 67.0
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 6.0e-77 291.2 197 68.5
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.0e-76 290.4 198 69.7
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 2.3e-76 289.3 197 65.0
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 3.0e-76 288.9 198 67.2
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 3.9e-76 288.5 198 66.7
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 5.1e-76 288.1 198 67.2
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 5.1e-76 288.1 198 69.7
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 6.6e-76 287.7 197 67.5
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 8.7e-76 287.3 198 67.2
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 8.7e-76 287.3 198 67.7
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 8.7e-76 287.3 183 71.6
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 1.9e-75 286.2 198 66.7
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 1.9e-75 286.2 198 67.7
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 2.5e-75 285.8 198 64.6
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 3.3e-75 285.4 198 66.7
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 4.3e-75 285.0 196 68.4
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 4.3e-75 285.0 197 67.5
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 5.6e-75 284.6 198 67.2
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 9.6e-75 283.9 198 65.7
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 1.3e-74 283.5 198 66.7
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.3e-74 283.5 198 65.2
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.6e-74 283.1 198 65.7
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 2.1e-74 282.7 198 65.2
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 2.8e-74 282.3 198 66.2
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 3.6e-74 282.0 198 65.7
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 3.6e-74 282.0 198 67.2
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 4.8e-74 281.6 198 66.2
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 6.2e-74 281.2 198 66.2
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 8.1e-74 280.8 197 65.5
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 8.1e-74 280.8 197 65.5
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.4e-73 280.0 183 68.9
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.8e-73 279.6 197 66.0
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 1.8e-73 279.6 198 67.2
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 3.1e-73 278.9 198 66.2
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 3.1e-73 278.9 186 67.7
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 3.1e-73 278.9 196 64.8
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 5.3e-73 278.1 198 65.2
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 6.9e-73 277.7 198 63.1
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 6.9e-73 277.7 197 65.5
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 6.9e-73 277.7 186 68.8
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 9.0e-73 277.3 184 69.0
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 1.2e-72 276.9 197 65.5
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 1.5e-72 276.6 198 65.2
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 2.0e-72 276.2 197 65.5
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 2.6e-72 275.8 184 69.0
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 2.6e-72 275.8 184 69.0
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 3.4e-72 275.4 183 68.3
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 7.6e-72 274.2 189 65.6
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 9.9e-72 273.9 198 65.2
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 2.9e-71 272.3 197 62.9
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 2.9e-71 272.3 198 61.1
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 2.9e-71 272.3 196 64.3
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 3.8e-71 271.9 198 65.7
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 6.4e-71 271.2 198 63.1
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 1.1e-70 270.4 198 62.6
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 1.4e-70 270.0 199 65.8
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 1.9e-70 269.6 194 64.4
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 1.9e-70 269.6 196 63.8
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 3.2e-70 268.9 198 63.1
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 5.5e-70 268.1 191 66.0
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 9.3e-70 267.3 198 61.6
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.2e-69 266.9 198 63.1
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 3.5e-69 265.4 191 62.3
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 4.6e-69 265.0 198 61.6
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 1.0e-68 263.8 198 61.6
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 3.0e-68 262.3 198 61.1
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 8.7e-68 260.8 198 60.6
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 2.5e-67 259.2 198 62.1
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 2.5e-67 259.2 196 60.7
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 1.3e-66 256.9 186 64.0
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 2.1e-66 256.1 189 61.9
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 2.8e-66 255.8 195 62.1
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 1.4e-65 253.4 196 60.2
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 1.8e-65 253.1 198 59.1
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 3.1e-65 252.3 198 58.6
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 9.0e-65 250.8 196 62.8
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 1.7e-63 246.5 183 64.5
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 2.9e-63 245.7 191 61.3
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 2.7e-61 239.2 178 61.2
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 6.7e-60 234.6 187 59.9
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 3.3e-59 232.3 183 59.6
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 2.4e-57 226.1 162 64.8
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 3.1e-57 225.7 190 57.9
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 1.0e-55 220.7 187 54.0
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 2.9e-55 219.2 169 59.8
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 2.9e-55 219.2 143 68.5
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 3.2e-54 215.7 144 68.8
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 7.2e-54 214.5 144 65.3
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 6.1e-53 211.5 191 52.4
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 7.9e-53 211.1 155 65.2
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 6.7e-52 208.0 199 54.8
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 1.1e-51 207.2 144 63.2
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 1.8e-49 199.9 156 58.3
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 2.6e-48 196.1 198 48.0
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 6.5e-47 191.4 197 47.2
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 2.0e-43 179.9 114 65.8
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 1.0e-39 167.5 198 45.5
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 6.5e-39 164.9 98 69.4
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 1.9e-38 163.3 126 59.5
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 3.2e-38 162.5 191 45.5
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 1.0e-36 157.5 177 42.9
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 5.7e-35 151.8 192 45.3
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 2.4e-25 119.8 185 33.0
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 3.8e-23 112.5 74 64.9
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 2.5e-22 109.8 67 71.6
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 2.1e-21 106.7 113 47.8
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 4.0e-20 102.4 112 47.3
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 4.0e-20 102.4 120 44.2
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 5.2e-20 102.1 107 47.7
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 1.5e-19 100.5 192 37.0
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 3.5e-16 89.4 71 53.5
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 2.7e-13 79.7 64 56.2
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 3.0e-12 76.3 58 62.1


User provided reference genes

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