Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 3.0e-96 355.1 175 100.0
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 1.7e-38 163.3 139 65.5
MSTRG.2398 Avicennia marina HOM05D007558 ORTHO05D009245 4.9e-30 135.2 136 52.2
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 1.7e-27 126.7 141 51.8
MSTRG.591 Avicennia marina HOM05D007558 ORTHO05D009245 1.1e-26 124.0 103 66.0
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 1.9e-26 123.2 141 52.5
SalBow8G4409 Salvia bowleyana HOM05D007558 ORTHO05D009245 5.2e-24 115.2 146 42.5
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 3.4e-23 112.5 143 47.6
unitig_22.g6434 Utricularia gibba HOM05D007558 ORTHO05D009245 1.1e-21 107.5 147 46.3
SGA_v2.0_scaffold165G38235 Striga asiatica HOM05D007558 ORTHO05D009245 2.4e-21 106.3 122 59.8
unitig_26.g10360 Utricularia gibba HOM05D007558 ORTHO05D009245 2.1e-20 103.2 117 55.6
unitig_8.g3152 Utricularia gibba HOM05D007558 ORTHO05D009245 3.0e-19 99.4 137 46.0
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 4.3e-18 95.5 140 45.0
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 8.1e-17 91.3 113 47.8
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 1.4e-16 90.5 120 48.3
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 1.8e-16 90.1 107 51.4
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 5.2e-16 88.6 121 45.5
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 6.8e-16 88.2 114 48.2
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 1.2e-15 87.4 133 44.4
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 1.5e-15 87.0 134 46.3
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 2.6e-15 86.3 115 47.0
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 1.3e-14 84.0 130 42.3
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.1e-13 80.9 122 47.5
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 1.9e-13 80.1 122 46.7
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 1.9e-13 80.1 129 42.6
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 3.2e-13 79.3 111 51.4
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 3.2e-13 79.3 123 43.9
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 4.1e-13 79.0 112 45.5
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 4.1e-13 79.0 103 46.6
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 5.4e-13 78.6 123 43.9
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 7.1e-13 78.2 130 44.6
ECA234G1002 Erigeron canadensis HOM05D007558 ORTHO05D009245 9.2e-13 77.8 102 49.0
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 9.2e-13 77.8 122 45.9
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 9.2e-13 77.8 122 45.9
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 1.2e-12 77.4 119 45.4
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 1.2e-12 77.4 101 44.6
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 1.6e-12 77.0 91 50.5
Migut.L01422 Erythranthe guttata HOM05D007558 ORTHO05D009245 1.6e-12 77.0 106 46.2
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 2.7e-12 76.3 106 48.1
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 2.7e-12 76.3 114 44.7
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 4.6e-12 75.5 113 44.2
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 6.0e-12 75.1 127 39.4
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 1.3e-11 73.9 130 38.5
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 1.3e-11 73.9 106 42.5
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 1.3e-11 73.9 110 40.0
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 1.3e-11 73.9 83 50.6
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 1.7e-11 73.6 95 51.6
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 1.7e-11 73.6 117 41.9
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 2.3e-11 73.2 130 44.6
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 3.0e-11 72.8 122 41.8
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 5.1e-11 72.0 98 44.9
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 5.1e-11 72.0 121 39.7
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 6.6e-11 71.6 90 50.0
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 8.6e-11 71.2 126 38.9
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 1.1e-10 70.9 128 39.8
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 1.5e-10 70.5 109 44.0
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.5e-10 70.5 100 41.0
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.5e-10 70.5 100 41.0
Sopen04g014760 Solanum pennellii HOM05D007558 ORTHO05D009245 1.5e-10 70.5 122 42.6
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 1.9e-10 70.1 124 39.5
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 3.3e-10 69.3 111 45.0
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 3.3e-10 69.3 105 40.0
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 4.3e-10 68.9 115 41.7
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 4.3e-10 68.9 94 47.9
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 4.3e-10 68.9 102 42.2
unitig_8.g3942 Utricularia gibba HOM05D007558 ORTHO05D009245 4.3e-10 68.9 134 35.8
Solyc04g026250.1 Solanum lycopersicum HOM05D007558 ORTHO05D009245 5.6e-10 68.6 122 42.6
EL10Ac6g13681 Beta vulgaris HOM05D023191 ORTHO05D009245 2.8e-09 66.2 73 53.4
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 3.6e-09 65.9 112 37.5
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 3.6e-09 65.9 113 41.6
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 4.7e-09 65.5 112 37.5
CiPaw.05G151900 Carya illinoinensis HOM05D007558 ORTHO05D009245 8.1e-09 64.7 62 51.6
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.1e-08 64.3 125 36.8
AUR62014050 Chenopodium quinoa HOM05D023191 ORTHO05D009245 1.4e-08 63.9 77 49.4
Eucgr.B03316 Eucalyptus grandis HOM05D007558 ORTHO05D009245 1.4e-08 63.9 134 36.6
Lalb_Chr16g0382221 Lupinus albus HOM05D007558 ORTHO05D009245 1.4e-08 63.9 127 41.7
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 1.4e-08 63.9 106 39.6
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 1.4e-08 63.9 117 43.6
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 1.4e-08 63.9 123 39.0
AUR62005388 Chenopodium quinoa HOM05D023191 ORTHO05D009245 1.8e-08 63.5 77 48.1
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 2.4e-08 63.2 84 48.8
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 3.1e-08 62.8 123 39.8
PGSC0003DMG400027920 Solanum tuberosum HOM05D007558 ORTHO05D009245 3.1e-08 62.8 121 41.3
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 3.1e-08 62.8 121 38.8
Psat4g124320 Pisum sativum HOM05D007558 ORTHO05D009245 4.0e-08 62.4 52 53.8
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 4.0e-08 62.4 72 47.2
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 4.0e-08 62.4 90 45.6
Ah.02g129970 Amaranthus hybridus HOM05D023191 ORTHO05D009245 6.8e-08 61.6 49 63.3
Nitab4.5_0000034g0280 Nicotiana tabacum HOM05D007558 ORTHO05D009245 6.8e-08 61.6 110 38.2
GSVIVG01013748001 Vitis vinifera HOM05D007558 ORTHO05D009245 6.8e-08 61.6 82 50.0
Ah.03g132750 Amaranthus hybridus HOM05D023191 ORTHO05D009245 8.9e-08 61.2 55 54.5
ATR0730G210 Amborella trichopoda HOM05D022024 ORTHO05D009245 8.9e-08 61.2 46 56.5
Glyma.02G035400 Glycine max HOM05D007558 ORTHO05D009245 8.9e-08 61.2 112 39.3
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 1.2e-07 60.8 121 38.0
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.2e-07 60.8 102 42.2
Gohir.A03G139000 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.5e-07 60.5 102 42.2
VMungo0251G2708 Vigna mungo HOM05D007558 ORTHO05D009245 2.0e-07 60.1 105 39.0
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 3.4e-07 59.3 86 41.9
Lalb_Chr09g0334981 Lupinus albus HOM05D007558 ORTHO05D009245 5.8e-07 58.5 135 37.8
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 7.6e-07 58.2 123 35.8
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 1.7e-06 57.0 115 37.4
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 1.7e-06 57.0 115 37.4
BolC2t08819H Brassica oleracea HOM05D008527 ORTHO05D010701 2.2e-06 56.6 100 40.0
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 2.9e-06 56.2 101 37.6
CANSAT01G1746 Cannabis sativa HOM05D007558 ORTHO05D009245 3.8e-06 55.8 54 55.6


User provided reference genes

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