Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04189 Striga asiatica HOM05D002383 ORTHO05D002515 1.9e-62 242.3 115 100.0
Sp7g01460 Schrenkiella parvula HOM05D002383 ORTHO05D002515 2.7e-13 79.0 115 40.9
C04p47260 Brassica napus HOM05D002383 ORTHO05D002515 4.6e-13 78.2 102 40.2
BolC4t26325H Brassica oleracea HOM05D002383 ORTHO05D002515 4.6e-13 78.2 102 40.2
BraA04t17007Z Brassica rapa HOM05D002383 ORTHO05D002515 6.1e-13 77.8 114 40.4
CSS0031549 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 6.1e-13 77.8 114 41.2
MSTRG.7920 Avicennia marina HOM05D002383 ORTHO05D002515 7.9e-13 77.4 95 47.4
BcaB06g27511 Brassica carinata HOM05D002383 ORTHO05D002515 1.4e-12 76.6 114 40.4
A04p13490 Brassica napus HOM05D002383 ORTHO05D002515 1.4e-12 76.6 114 40.4
Rhsim10G0017000 Rhododendron simsii HOM05D002383 ORTHO05D002515 1.8e-12 76.3 114 38.6
Eucgr.I01742 Eucalyptus grandis HOM05D002383 ORTHO05D002515 5.1e-12 74.7 96 46.9
Potri.008G187300 Populus trichocarpa HOM05D002383 ORTHO05D002515 6.7e-12 74.3 117 41.9
Hma1.2p1_0223F.1_g094100 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 1.1e-11 73.6 105 41.9
BcaC04g23898 Brassica carinata HOM05D002383 ORTHO05D002515 2.0e-11 72.8 107 39.3
C09p03670 Brassica napus HOM05D002383 ORTHO05D002515 2.0e-11 72.8 107 39.3
Migut.E00196 Erythranthe guttata HOM05D002383 ORTHO05D002515 2.0e-11 72.8 115 40.0
COL.COLO4_29113 Corchorus olitorius HOM05D002383 ORTHO05D002515 2.5e-11 72.4 114 43.9
BolC9t53287H Brassica oleracea HOM05D002383 ORTHO05D002515 3.3e-11 72.0 107 39.3
Glyma.18G143300 Glycine max HOM05D002383 ORTHO05D002515 3.3e-11 72.0 116 42.2
MSTRG.570 Avicennia marina HOM05D002383 ORTHO05D002515 4.3e-11 71.6 114 40.4
CARHR261560 Cardamine hirsuta HOM05D002383 ORTHO05D002515 5.7e-11 71.2 119 40.3
DCAR_021721 Daucus carota HOM05D002383 ORTHO05D002515 5.7e-11 71.2 99 44.4
Thhalv10028250m.g Eutrema salsugineum HOM05D002383 ORTHO05D002515 7.4e-11 70.9 114 38.6
SalBow8G3288 Salvia bowleyana HOM05D002383 ORTHO05D002515 7.4e-11 70.9 115 43.5
Potri.010G045200 Populus trichocarpa HOM05D002383 ORTHO05D002515 1.3e-10 70.1 101 43.6
Ciclev10017241m.g Citrus clementina HOM05D002383 ORTHO05D002515 1.7e-10 69.7 101 42.6
TAR629G2295 Trochodendron aralioides HOM05D002383 ORTHO05D002515 1.7e-10 69.7 113 38.1
MSTRG.2419 Avicennia marina HOM05D002383 ORTHO05D002515 2.2e-10 69.3 99 47.5
Manes.12G024000 Manihot esculenta HOM05D002383 ORTHO05D002515 2.2e-10 69.3 116 40.5
AT5G40460 Arabidopsis thaliana HOM05D002383 ORTHO05D002515 3.7e-10 68.6 105 39.0
THA.LOC104825323 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 6.3e-10 67.8 100 41.0
Hma1.2p1_2120F.1_g314410 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 8.2e-10 67.4 98 40.8
RcHm_v2.0_Chr4g0432781 Rosa chinensis HOM05D002383 ORTHO05D002515 8.2e-10 67.4 109 42.2
Eucgr.B03299 Eucalyptus grandis HOM05D002383 ORTHO05D002515 2.4e-09 65.9 120 41.7
PGR142G2811 Punica granatum HOM05D002383 ORTHO05D002515 2.4e-09 65.9 111 40.5
Hma1.2p1_0160F.1_g071240 Hydrangea macrophylla HOM05D002383 ORTHO05D002515 3.1e-09 65.5 91 42.9
CSS0011711 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 4.1e-09 65.1 113 38.1
Cc11_g15590 Coffea canephora HOM05D002383 ORTHO05D002515 4.1e-09 65.1 97 45.4
CSS0002762 Camellia sinensis var. sinensis HOM05D002383 ORTHO05D002515 5.3e-09 64.7 98 40.8
Solyc02g067810.1 Solanum lycopersicum HOM05D002383 ORTHO05D002515 5.3e-09 64.7 94 38.3
Sopen02g016920 Solanum pennellii HOM05D002383 ORTHO05D002515 5.3e-09 64.7 94 38.3
FAN22G0427 Fragaria x ananassa HOM05D002383 ORTHO05D002515 6.9e-09 64.3 102 40.2
Prupe.1G243100 Prunus persica HOM05D002383 ORTHO05D002515 6.9e-09 64.3 116 40.5
A09p03450 Brassica napus HOM05D002383 ORTHO05D002515 9.1e-09 63.9 94 39.4
Thhalv10005308m.g Eutrema salsugineum HOM05D002383 ORTHO05D002515 9.1e-09 63.9 107 37.4
FAN07G2594 Fragaria x ananassa HOM05D002383 ORTHO05D002515 9.1e-09 63.9 105 37.1
TAR622G1076 Trochodendron aralioides HOM05D002383 ORTHO05D002515 9.1e-09 63.9 111 37.8
Haze_12239 Corylus avellana HOM05D002383 ORTHO05D002515 1.2e-08 63.5 105 41.9
Sopen02g031160 Solanum pennellii HOM05D002383 ORTHO05D002515 1.2e-08 63.5 101 38.6
AL7G49370 Arabidopsis lyrata HOM05D002383 ORTHO05D002515 1.5e-08 63.2 105 37.1
BraA09t35983Z Brassica rapa HOM05D002383 ORTHO05D002515 1.5e-08 63.2 94 39.4
Oeu036541.1 Olea europaea HOM05D002383 ORTHO05D002515 1.5e-08 63.2 107 36.4
CANSAT01G0072 Cannabis sativa HOM05D002383 ORTHO05D002515 2.0e-08 62.8 123 37.4
CiPaw.05G183200 Carya illinoinensis HOM05D002383 ORTHO05D002515 2.0e-08 62.8 99 39.4
THA.LOC104805371 Tarenaya hassleriana HOM05D002383 ORTHO05D002515 2.0e-08 62.8 106 35.8
TAR374G1253 Trochodendron aralioides HOM05D002383 ORTHO05D002515 2.0e-08 62.8 111 36.9
Aa31LG9G1160 Aethionema arabicum HOM05D002383 ORTHO05D002515 2.6e-08 62.4 106 39.6
Aqoxy5G03793 Aquilegia oxysepala HOM05D002383 ORTHO05D002515 2.6e-08 62.4 104 37.5
PGSC0003DMG400012600 Solanum tuberosum HOM05D002383 ORTHO05D002515 2.6e-08 62.4 101 38.6
Carub.0007s3513 Capsella rubella HOM05D002383 ORTHO05D002515 3.4e-08 62.0 109 36.7
Cfa009202 Carpinus fangiana HOM05D002383 ORTHO05D002515 3.4e-08 62.0 100 41.0
CiPaw.06G068500 Carya illinoinensis HOM05D002383 ORTHO05D002515 3.4e-08 62.0 101 40.6
FAN17G0502 Fragaria x ananassa HOM05D002383 ORTHO05D002515 3.4e-08 62.0 102 39.2
Sed0020664 Sechium edule HOM05D002383 ORTHO05D002515 3.4e-08 62.0 96 39.6
Sp2g16760 Schrenkiella parvula HOM05D002383 ORTHO05D002515 4.5e-08 61.6 105 33.3
Nitab4.5_0002468g0020 Nicotiana tabacum HOM05D002383 ORTHO05D002515 5.9e-08 61.2 95 40.0
Solyc02g086450.1 Solanum lycopersicum HOM05D002383 ORTHO05D002515 7.7e-08 60.8 101 37.6
CAN.G1057.2 Capsicum annuum HOM05D002383 ORTHO05D002515 1.0e-07 60.5 98 35.7
Migut.K01394 Erythranthe guttata HOM05D002383 ORTHO05D002515 1.0e-07 60.5 109 35.8
SGA_v2.0_scaffold224G42989 Striga asiatica HOM05D002383 ORTHO05D002515 1.0e-07 60.5 105 37.1
BcaB04g19442 Brassica carinata HOM05D002383 ORTHO05D002515 1.3e-07 60.1 107 33.6
Cpa.g.sc130.83 Carica papaya HOM05D002383 ORTHO05D002515 1.3e-07 60.1 101 38.6
Oeu018138.1 Olea europaea HOM05D002383 ORTHO05D002515 1.3e-07 60.1 98 36.7
Oeu059910.1 Olea europaea HOM05D002383 ORTHO05D002515 1.3e-07 60.1 79 41.8
TWI12G0144 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 1.3e-07 60.1 98 37.8
BcaC06g30972 Brassica carinata HOM05D002383 ORTHO05D002515 1.7e-07 59.7 99 36.4
DCAR_007058 Daucus carota HOM05D002383 ORTHO05D002515 1.7e-07 59.7 79 41.8
Lsat_1_v5_gn_4_4281 Lactuca sativa HOM05D002383 ORTHO05D002515 1.7e-07 59.7 90 36.7
BcaC06g33793 Brassica carinata HOM05D002383 ORTHO05D002515 2.2e-07 59.3 106 36.8
C07p36820 Brassica napus HOM05D002383 ORTHO05D002515 2.2e-07 59.3 106 36.8
BolC7t44195H Brassica oleracea HOM05D002383 ORTHO05D002515 2.2e-07 59.3 106 36.8
CAN.G473.10 Capsicum annuum HOM05D002383 ORTHO05D002515 2.9e-07 58.9 101 38.6
Nitab4.5_0003318g0160 Nicotiana tabacum HOM05D002383 ORTHO05D002515 2.9e-07 58.9 92 37.0
PGSC0003DMG400006915 Solanum tuberosum HOM05D002383 ORTHO05D002515 2.9e-07 58.9 94 39.4
ClCG09G019250 Citrullus lanatus HOM05D002383 ORTHO05D002515 5.0e-07 58.2 96 38.5
Peaxi162Scf00080g00104 Petunia axillaris HOM05D002383 ORTHO05D002515 5.0e-07 58.2 88 39.8
Oeu028589.1 Olea europaea HOM05D002383 ORTHO05D002515 6.5e-07 57.8 102 29.4
Aa31LG2G5040 Aethionema arabicum HOM05D002383 ORTHO05D002515 8.5e-07 57.4 108 35.2
Glyma.08G282900 Glycine max HOM05D002383 ORTHO05D002515 8.5e-07 57.4 110 36.4
BcaC06g30970 Brassica carinata HOM05D002383 ORTHO05D002515 1.1e-06 57.0 112 34.8
MELO3C021579.2 Cucumis melo HOM05D002383 ORTHO05D002515 1.1e-06 57.0 98 37.8
QL03p058475 Quercus lobata HOM05D002383 ORTHO05D002515 1.1e-06 57.0 93 40.9
CsaV3_5G027140 Cucumis sativus L. HOM05D002383 ORTHO05D002515 1.4e-06 56.6 88 38.6
Lalb_Chr02g0160501 Lupinus albus HOM05D002383 ORTHO05D002515 1.4e-06 56.6 98 39.8
VMungo0464G1703 Vigna mungo HOM05D002383 ORTHO05D002515 1.4e-06 56.6 92 44.6
Oeu014151.1 Olea europaea HOM05D002383 ORTHO05D002515 2.5e-06 55.8 86 46.5
Phvul.004G010700 Phaseolus vulgaris HOM05D002383 ORTHO05D002515 2.5e-06 55.8 88 44.3
Psat1g054720 Pisum sativum HOM05D002383 ORTHO05D002515 2.5e-06 55.8 89 42.7
PGR102G1460 Punica granatum HOM05D002383 ORTHO05D002515 2.5e-06 55.8 99 33.3
Gohir.D10G086500 Gossypium hirsutum HOM05D002383 ORTHO05D002515 4.2e-06 55.1 111 37.8
TWI75G1208 Tripterygium wilfordii HOM05D002383 ORTHO05D002515 4.2e-06 55.1 102 39.2
Ca_04577_v3 Cicer arietinum L. HOM05D002383 ORTHO05D002515 5.5e-06 54.7 96 40.6
Sed0014920 Sechium edule HOM05D002383 ORTHO05D002515 5.5e-06 54.7 96 37.5
Cfa007370 Carpinus fangiana HOM05D002383 ORTHO05D002515 9.4e-06 53.9 76 43.4
Haze_14738 Corylus avellana HOM05D002383 ORTHO05D002515 9.4e-06 53.9 76 43.4


User provided reference genes

Program Settings