Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold89G27538 Striga asiatica HOM05D027553 ORTHO05D009940 4.6e-100 367.9 179 100.0
SGA_v2.0_scaffold36G14482 Striga asiatica HOM05D024854 ORTHO05D009940 5.5e-29 131.7 271 35.8
SGA_v2.0_scaffold106G30721 Striga asiatica HOM05D000045 ORTHO05D009940 1.1e-24 117.5 270 33.7
SGA_v2.0_scaffold29G12202 Striga asiatica HOM05D000045 ORTHO05D000067 1.4e-19 100.5 166 41.0
SGA_v2.0_scaffold33G13568 Striga asiatica HOM05D027553 ORTHO05D014193 5.9e-15 85.1 145 35.2
SGA_v2.0_scaffold18G08264 Striga asiatica HOM05D000045 ORTHO05D009940 1.0e-11 74.3 57 56.1
SGA_v2.0_scaffold108G30830 Striga asiatica HOM05D000045 ORTHO05D009940 2.3e-11 73.2 57 54.4
SGA_v2.0_scaffold4G01942 Striga asiatica HOM05D000045 ORTHO05D009940 1.2e-10 70.9 57 52.6
TWI60G0659 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 9.8e-10 67.8 57 52.6
TWI81G0019 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.7e-09 67.0 57 47.4
TWI14G0305 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.7e-09 65.9 57 47.4
TWI31G0500 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-08 64.3 57 49.1
TWI81G0958 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-08 64.3 57 49.1
SGA_v2.0_scaffold263G45977 Striga asiatica HOM05D000045 ORTHO05D009940 5.4e-08 62.0 48 58.3
TWI09G0748 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 7.0e-08 61.6 148 28.4
SGA_v2.0_scaffold35G14139 Striga asiatica HOM05D000045 ORTHO05D009940 9.1e-08 61.2 68 42.6
TWI79G0782 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.1e-08 61.2 57 52.6
PSO063G1228 Papaver somniferum HOM05D000045 ORTHO05D000067 1.2e-07 60.8 57 42.1
PSO541G3849 Papaver somniferum HOM05D000045 ORTHO05D000067 1.2e-07 60.8 57 42.1
SGA_v2.0_scaffold29G12137 Striga asiatica HOM05D000045 ORTHO05D009940 1.6e-07 60.5 57 43.9
SGA_v2.0_scaffold109G31025 Striga asiatica HOM05D000045 ORTHO05D002701 2.0e-07 60.1 55 47.3
SGA_v2.0_scaffold126G33925 Striga asiatica HOM05D000045 ORTHO05D009940 2.0e-07 60.1 57 45.6
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.0e-07 60.1 57 43.9
TWI23G1327 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.0e-07 60.1 57 43.9
TWI60G1550 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.0e-07 60.1 57 43.9
SGA_v2.0_scaffold18G08258 Striga asiatica HOM05D027553 ORTHO05D009940 3.5e-07 59.3 117 33.3
TWI59G0983 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.5e-07 58.9 57 43.9
TWI18G1436 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 7.7e-07 58.2 56 46.4
TWI34G1375 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 7.7e-07 58.2 57 43.9
TWI74G0350 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 7.7e-07 58.2 57 43.9
TWI79G1745 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 7.7e-07 58.2 56 46.4
SGA_v2.0_scaffold109G31088 Striga asiatica HOM05D000045 ORTHO05D009940 1.3e-06 57.4 58 46.6
SGA_v2.0_scaffold56G20041 Striga asiatica HOM05D000045 ORTHO05D009940 1.3e-06 57.4 57 43.9
TWI77G0218 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.3e-06 56.6 57 36.8
SGA_v2.0_scaffold52G19239 Striga asiatica HOM05D022335 ORTHO05D009940 2.9e-06 56.2 69 42.0
TWI60G1422 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.9e-06 56.2 57 40.4
PSO832G2963 Papaver somniferum HOM05D000045 ORTHO05D000067 3.8e-06 55.8 57 50.9
TWI56G1316 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 3.8e-06 55.8 57 40.4
TWI39G0068 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.6e-06 54.7 132 28.0
TWI39G0460 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.6e-06 54.7 132 28.0
TWI59G1432 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.6e-06 54.7 57 42.1


User provided reference genes

Program Settings