Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 2.1e-57 225.3 105 100.0
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 2.0e-31 139.0 79 75.9
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 2.2e-30 135.6 100 57.0
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 1.0e-27 126.7 71 67.6
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 1.4e-27 126.3 102 56.9
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 3.0e-27 125.2 89 57.3
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 5.2e-27 124.4 99 56.6
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 5.2e-27 124.4 99 56.6
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 6.7e-27 124.0 102 55.9
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 1.1e-26 123.2 88 61.4
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 1.7e-25 119.4 93 57.0
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 6.3e-25 117.5 92 54.3
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.1e-24 116.7 90 55.6
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 1.1e-24 116.7 92 55.4
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 7.0e-24 114.0 71 57.7
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 9.1e-24 113.6 89 50.6
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 2.0e-23 112.5 97 52.6
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 2.7e-23 112.1 75 64.0
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 5.9e-23 110.9 106 47.2
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 7.7e-23 110.5 95 52.6
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 7.7e-23 110.5 106 47.2
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 2.9e-22 108.6 106 46.2
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 2.9e-22 108.6 75 60.0
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 3.8e-22 108.2 97 45.4
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 5.0e-22 107.8 92 50.0
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 6.5e-22 107.5 100 43.0
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 6.5e-22 107.5 72 56.9
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 8.5e-22 107.1 75 58.7
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 1.1e-21 106.7 112 45.5
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 2.5e-21 105.5 97 48.5
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 2.5e-21 105.5 100 48.0
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.6e-20 102.8 93 53.8
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 3.6e-20 101.7 92 45.7
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 4.7e-20 101.3 97 44.3
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 4.7e-20 101.3 101 41.6
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 8.0e-20 100.5 92 46.7
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 1.0e-19 100.1 92 47.8
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 3.0e-19 98.6 101 41.6
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 4.0e-19 98.2 71 59.2
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 6.8e-19 97.4 74 58.1
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 6.8e-19 97.4 70 52.9
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 8.8e-19 97.1 97 42.3
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 1.2e-18 96.7 101 46.5
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 2.0e-18 95.9 86 51.2
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 1.7e-17 92.8 95 43.2
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.2e-17 92.4 92 47.8
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 2.2e-17 92.4 92 47.8
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 4.8e-17 91.3 71 56.3
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 8.3e-17 90.5 90 42.2
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.1e-16 90.1 100 40.0
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 7.0e-16 87.4 92 44.6
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 9.1e-16 87.0 87 43.7
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 1.6e-15 86.3 104 40.4
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 1.6e-15 86.3 104 40.4
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 1.6e-15 86.3 104 40.4
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 5.9e-15 84.3 72 44.4
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 5.9e-15 84.3 104 39.4
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 5.9e-15 84.3 104 39.4
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 7.7e-15 84.0 104 37.5
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 2.9e-14 82.0 105 37.1
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 2.9e-14 82.0 79 40.5
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 8.5e-14 80.5 76 42.1
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 1.1e-13 80.1 68 50.0
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 1.1e-13 80.1 101 36.6
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 1.9e-13 79.3 100 35.0
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 1.9e-13 79.3 72 38.9
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 3.2e-13 78.6 101 34.7
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 5.5e-13 77.8 68 44.1
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 1.6e-12 76.3 74 39.2
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 2.1e-12 75.9 102 36.3
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 2.1e-12 75.9 102 36.3
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 2.1e-12 75.9 102 36.3
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 6.1e-12 74.3 96 37.5
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 2.0e-10 69.3 101 34.7
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 2.6e-10 68.9 89 33.7
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 4.9e-09 64.7 100 31.0
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 6.3e-09 64.3 95 32.6
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 8.3e-09 63.9 67 35.8
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 8.3e-09 63.9 67 35.8
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 8.3e-09 63.9 67 35.8


User provided reference genes

Program Settings