Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold89G27486 Striga asiatica HOM05D004496 ORTHO05D005513 5.9e-152 541.2 353 100.0
Migut.H01591 Erythranthe guttata HOM05D004496 ORTHO05D005513 2.0e-62 243.8 357 53.5
MSTRG.13128 Avicennia marina HOM05D004496 ORTHO05D005513 1.0e-55 221.5 360 44.4
Migut.M01368 Erythranthe guttata HOM05D004496 ORTHO05D005513 1.5e-54 217.6 360 45.8
MSTRG.7183 Avicennia marina HOM05D004496 ORTHO05D005513 2.2e-53 213.8 366 46.2
Dinv13941 Davidia involucrata HOM05D004496 ORTHO05D005513 1.1e-49 201.4 337 50.4
SalBow8G1688 Salvia bowleyana HOM05D004496 ORTHO05D005513 1.9e-49 200.7 354 42.1
Nitab4.5_0006125g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 5.2e-47 192.6 397 43.8
Nn1g03388 Nelumbo nucifera HOM05D004496 ORTHO05D005513 2.0e-46 190.7 363 48.5
Nitab4.5_0009517g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.4e-44 184.5 403 43.4
Lj2P264T22 Lonicera japonica HOM05D004496 ORTHO05D005513 5.4e-44 182.6 354 39.5
Nitab4.5_0005882g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.6e-43 181.0 346 42.8
PGSC0003DMG400016725 Solanum tuberosum HOM05D004496 ORTHO05D005513 1.0e-42 178.3 383 47.3
Nitab4.5_0000005g0040 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.6e-40 171.0 347 42.4
Dinv20109 Davidia involucrata HOM05D004496 ORTHO05D005950 3.6e-40 169.9 320 47.2
Hma1.2p1_0298F.1_g117440 Hydrangea macrophylla HOM05D004496 ORTHO05D005513 3.6e-40 169.9 359 49.9
MD10G1327300 Malus domestica HOM05D004496 ORTHO05D005513 6.1e-40 169.1 386 42.0
Gohir.D05G176300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 1.8e-39 167.5 359 45.7
Prupe.4G014700 Prunus persica HOM05D004496 ORTHO05D005513 6.8e-39 165.6 356 44.9
Nn1g07279 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.2e-38 164.9 377 45.6
TAR627G0966 Trochodendron aralioides HOM05D004496 ORTHO05D005513 2.0e-38 164.1 353 47.3
Gohir.A05G173300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 3.4e-38 163.3 357 47.1
TAR627G0164 Trochodendron aralioides HOM05D004496 ORTHO05D005513 3.4e-38 163.3 352 47.4
Lalb_Chr18g0056781 Lupinus albus HOM05D004496 ORTHO05D005513 2.2e-37 160.6 343 46.9
Sopen02g025790 Solanum pennellii HOM05D004496 ORTHO05D005513 2.9e-37 160.2 365 46.3
Thecc.06G228600 Theobroma cacao HOM05D004496 ORTHO05D005513 4.9e-37 159.5 358 44.7
Psat1g175480 Pisum sativum HOM05D004496 ORTHO05D005513 2.4e-36 157.1 342 42.7
Duzib192G0344 Durio zibethinus HOM05D004496 ORTHO05D005513 4.1e-36 156.4 359 41.8
Solyc02g081150.1 Solanum lycopersicum HOM05D004496 ORTHO05D005513 5.4e-36 156.0 370 45.1
Ca_00696_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 7.0e-36 155.6 356 42.4
Ciclev10015792m.g Citrus clementina HOM05D004496 ORTHO05D005513 7.0e-36 155.6 366 38.0
Duzib235G0420 Durio zibethinus HOM05D004496 ORTHO05D005513 9.2e-36 155.2 360 43.3
vmacro03662 Vaccinium macrocarpon HOM05D004496 ORTHO05D005513 3.5e-35 153.3 376 41.0
Sabra11G0008600 Salix brachista HOM05D004496 ORTHO05D005513 4.6e-35 152.9 360 43.3
Sabra11G0010200 Salix brachista HOM05D004496 ORTHO05D005513 4.6e-35 152.9 360 43.3
CAN.G1014.49 Capsicum annuum HOM05D004496 ORTHO05D005513 6.0e-35 152.5 369 40.9
TWI38G0464 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 7.8e-35 152.1 373 41.3
TWI38G0680 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 1.0e-34 151.8 368 46.5
CiPaw.09G098400 Carya illinoinensis HOM05D004496 ORTHO05D005513 1.7e-34 151.0 353 45.0
TAR624G0763 Trochodendron aralioides HOM05D001218 ORTHO05D003142 1.7e-34 151.0 351 42.7
Sabra11G0011700 Salix brachista HOM05D004496 ORTHO05D005513 5.0e-34 149.4 360 43.9
Cfa000158 Carpinus fangiana HOM05D004496 ORTHO05D005513 6.6e-34 149.1 369 48.2
CiPaw.10G074800 Carya illinoinensis HOM05D004496 ORTHO05D005513 6.6e-34 149.1 354 45.2
FAN25G1366 Fragaria x ananassa HOM05D004496 ORTHO05D005513 1.5e-33 147.9 344 39.5
Peaxi162Scf00708g00013 Petunia axillaris HOM05D004496 ORTHO05D005513 4.3e-33 146.4 355 45.9
Glyma.15G112200 Glycine max HOM05D004496 ORTHO05D005513 9.5e-33 145.2 356 41.9
Rhsim13G0149900 Rhododendron simsii HOM05D004496 ORTHO05D005513 9.5e-33 145.2 353 41.6
ClCG01G021640 Citrullus lanatus HOM05D004496 ORTHO05D005513 1.2e-32 144.8 369 40.9
Actinidia02342 Actinidia chinensis HOM05D004496 ORTHO05D005513 2.1e-32 144.1 348 48.0
Haze_06861 Corylus avellana HOM05D004496 ORTHO05D005513 2.8e-32 143.7 382 46.3
CsaV3_6G048690 Cucumis sativus L. HOM05D004496 ORTHO05D005513 8.0e-32 142.1 351 43.9
FvH4_3g01370 Fragaria vesca HOM05D004496 ORTHO05D005513 1.1e-31 141.7 349 42.1
Carub.0007s1912 Capsella rubella HOM05D004496 ORTHO05D005513 1.4e-31 141.4 382 39.3
CSS0046352 Camellia sinensis var. sinensis HOM05D004496 ORTHO05D005513 1.8e-31 141.0 343 44.3
Lsat_1_v5_gn_7_14880 Lactuca sativa HOM05D004496 ORTHO05D005513 2.3e-31 140.6 348 41.4
MELO3C007420.2 Cucumis melo HOM05D004496 ORTHO05D005513 4.0e-31 139.8 357 43.1
Actinidia26886 Actinidia chinensis HOM05D004496 ORTHO05D005513 6.8e-31 139.0 341 48.4
Aqoxy1G03511 Aquilegia oxysepala HOM05D004496 ORTHO05D005513 2.6e-30 137.1 379 39.1
CANSAT56G2524 Cannabis sativa HOM05D004496 ORTHO05D005513 2.6e-30 137.1 393 45.8
Phvul.006G145400 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 2.6e-30 137.1 369 38.5
Phvul.003G081900 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 4.4e-30 136.3 341 35.8
Lalb_Chr15g0087811 Lupinus albus HOM05D004496 ORTHO05D005513 5.8e-30 136.0 344 41.0
Manes.17G027100 Manihot esculenta HOM05D004496 ORTHO05D005513 1.3e-29 134.8 327 47.7
PSO210G3984 Papaver somniferum HOM05D004496 ORTHO05D005513 1.3e-29 134.8 403 42.9
Lj6g0013804 Lotus japonicus HOM05D004496 ORTHO05D005513 2.2e-29 134.0 335 43.0
Oeu003154.1 Olea europaea HOM05D004496 ORTHO05D005513 2.9e-29 133.7 331 39.6
DCAR_002205 Daucus carota HOM05D004496 ORTHO05D005513 3.7e-29 133.3 366 42.3
Sp7g20330 Schrenkiella parvula HOM05D004496 ORTHO05D005513 4.9e-29 132.9 365 40.0
Manes.16G002700 Manihot esculenta HOM05D004496 ORTHO05D005513 8.3e-29 132.1 360 41.9
BraA01t01298Z Brassica rapa HOM05D004496 ORTHO05D005513 1.1e-28 131.7 363 38.3
Glyma.09G007852 Glycine max HOM05D004496 ORTHO05D005513 1.4e-28 131.3 337 41.5
A01p13560 Brassica napus HOM05D004496 ORTHO05D005513 1.9e-28 131.0 363 38.3
Potri.011G015500 Populus trichocarpa HOM05D004496 ORTHO05D005513 2.4e-28 130.6 358 41.6
MD05G1352700 Malus domestica HOM05D004496 ORTHO05D005513 4.1e-28 129.8 370 41.1
THA.LOC104812981 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 7.0e-28 129.0 378 39.4
QL05p071740 Quercus lobata HOM05D004496 ORTHO05D005513 9.2e-28 128.6 358 48.0
TAR626G0621 Trochodendron aralioides HOM05D004496 ORTHO05D005513 1.2e-27 128.3 354 38.7
BcaNung01704 Brassica carinata HOM05D004496 ORTHO05D005513 1.6e-27 127.9 369 40.4
BcaC09g51153 Brassica carinata HOM05D004496 ORTHO05D005513 2.0e-27 127.5 362 39.5
C01p16430 Brassica napus HOM05D004496 ORTHO05D005513 2.0e-27 127.5 362 39.5
BolC1t01593H Brassica oleracea HOM05D004496 ORTHO05D005513 2.0e-27 127.5 362 39.5
BcaNung00807 Brassica carinata HOM05D004496 ORTHO05D005513 2.7e-27 127.1 370 36.8
C07p51660 Brassica napus HOM05D004496 ORTHO05D005513 2.7e-27 127.1 372 37.4
Thhalv10025698m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 2.7e-27 127.1 363 37.7
A03p53360 Brassica napus HOM05D004496 ORTHO05D005513 4.6e-27 126.3 363 39.7
Potri.004G003900 Populus trichocarpa HOM05D004496 ORTHO05D005513 4.6e-27 126.3 371 39.1
Sed0021394 Sechium edule HOM05D004496 ORTHO05D005513 4.6e-27 126.3 331 36.0
unitig_26.g9398 Utricularia gibba HOM05D004496 ORTHO05D005513 4.6e-27 126.3 333 35.4
PGR042G2934 Punica granatum HOM05D004496 ORTHO05D005513 6.0e-27 125.9 387 36.4
TWI63G1509 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 6.0e-27 125.9 373 41.3
AL7G31460 Arabidopsis lyrata HOM05D004496 ORTHO05D005513 7.8e-27 125.6 378 39.2
Thhalv10028862m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 7.8e-27 125.6 339 35.4
Lsat_1_v5_gn_4_61701 Lactuca sativa HOM05D004496 ORTHO05D005513 7.8e-27 125.6 359 42.9
THA.LOC104806318 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 7.8e-27 125.6 378 38.1
BcaNung03756 Brassica carinata HOM05D004496 ORTHO05D005513 1.0e-26 125.2 363 37.2
PSO832G0430 Papaver somniferum HOM05D004496 ORTHO05D005513 1.7e-26 124.4 414 39.9
CDE04G1983 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 2.3e-26 124.0 341 32.8
VMungo1215G0904 Vigna mungo HOM05D004496 ORTHO05D005513 2.3e-26 124.0 336 33.9
Sabra04G0002100 Salix brachista HOM05D004496 ORTHO05D005513 1.9e-25 120.9 361 37.4
Medtr2g024980 Medicago truncatula HOM05D004496 ORTHO05D005513 3.3e-25 120.2 364 39.8
Sed0016463 Sechium edule HOM05D004496 ORTHO05D005513 4.3e-25 119.8 290 42.4
Gorai.009G181700 Gossypium raimondii HOM05D004496 ORTHO05D005513 9.5e-25 118.6 315 44.8
Peaxi162Scf00294g00097 Petunia axillaris HOM05D004496 ORTHO05D005513 9.5e-25 118.6 301 35.9
GSVIVG01004818001 Vitis vinifera HOM05D004496 ORTHO05D005513 1.2e-24 118.2 244 38.9
Oeu007154.1 Olea europaea HOM05D004496 ORTHO05D005513 4.7e-24 116.3 312 42.3
Glyma.07G263700 Glycine max HOM05D004496 ORTHO05D005513 6.2e-24 115.9 330 35.5
Potri.006G270100 Populus trichocarpa HOM05D004496 ORTHO05D005513 6.2e-24 115.9 338 40.2
EL10Ac8g20132 Beta vulgaris HOM05D004496 ORTHO05D005513 1.4e-23 114.8 309 35.3
Gorai.010G184200 Gossypium raimondii HOM05D004496 ORTHO05D005513 3.1e-23 113.6 332 41.6
RcHm_v2.0_Chr5g0001991 Rosa chinensis HOM05D004496 ORTHO05D005513 4.0e-23 113.2 355 40.8
AT4G22190 Arabidopsis thaliana HOM05D004496 ORTHO05D005513 5.2e-23 112.8 373 41.3
Atru.chr10.2286 Acer truncatum HOM05D004496 ORTHO05D005513 1.2e-22 111.7 313 41.5
CARHR229080 Cardamine hirsuta HOM05D004496 ORTHO05D005513 2.0e-22 110.9 361 37.1
Gohir.D06G157600 Gossypium hirsutum HOM05D004496 ORTHO05D005513 2.0e-22 110.9 332 41.3
Cpa.g.sc3209.1 Carica papaya HOM05D004496 ORTHO05D005513 3.4e-22 110.2 366 38.8
Sc17g0007590 Simmondsia chinensis HOM05D004496 ORTHO05D005513 4.4e-22 109.8 344 38.1
MBI19_g19808_MAGBIO Magnolia biondii HOM05D004496 ORTHO05D005513 9.9e-22 108.6 342 43.3
arahy.Tifrunner.gnm1.ann1.SI7QTZ Arachis hypogaea HOM05D004496 ORTHO05D005513 1.7e-21 107.8 354 37.9
Aa31LG6G4310 Aethionema arabicum HOM05D004496 ORTHO05D005513 6.4e-21 105.9 373 37.5
Lj1P1236T60 Lonicera japonica HOM05D004496 ORTHO05D005513 6.4e-21 105.9 143 51.0
unitig_749.g13622 Utricularia gibba HOM05D004496 ORTHO05D005513 8.3e-21 105.5 336 41.7
arahy.Tifrunner.gnm1.ann1.EH65IB Arachis hypogaea HOM05D004496 ORTHO05D005513 1.1e-20 105.1 368 37.0
PGR004G2243 Punica granatum HOM05D004496 ORTHO05D005513 1.1e-20 105.1 371 36.7
COL.COLO4_31834 Corchorus olitorius HOM05D004496 ORTHO05D005513 1.4e-20 104.8 147 50.3
Lj4g0028181 Lotus japonicus HOM05D004496 ORTHO05D005513 2.1e-19 100.9 337 46.0
ECA236G1118 Erigeron canadensis HOM05D004496 ORTHO05D005513 3.5e-19 100.1 332 35.8
SGA_v2.0_scaffold4G01894 Striga asiatica HOM05D004496 ORTHO05D005513 1.0e-18 98.6 338 41.4
HPP92_023384 Vanilla planifolia HOM05D004496 ORTHO05D005513 1.3e-18 98.2 362 30.7
Sp6g04650 Schrenkiella parvula HOM05D004496 ORTHO05D005513 3.9e-18 96.7 357 32.8
Gohir.A06G151400 Gossypium hirsutum HOM05D004496 ORTHO05D005513 2.5e-17 94.0 233 43.8
THA.LOC104813445 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 9.5e-17 92.0 366 35.5
Nn1g01506 Nelumbo nucifera HOM05D004496 ORTHO05D005513 2.1e-16 90.9 150 43.3
Potri.006G282500 Populus trichocarpa HOM05D004496 ORTHO05D005513 2.1e-16 90.9 365 36.7
Ah.09g234500 Amaranthus hybridus HOM05D004496 ORTHO05D005950 1.1e-15 88.6 296 36.1
Medtr4g132690 Medicago truncatula HOM05D004496 ORTHO05D005513 4.0e-15 86.7 346 39.9
HanXRQChr15g0470781 Helianthus annuus HOM05D004496 ORTHO05D005513 7.6e-14 82.4 328 35.1
Aa31LG9G9910 Aethionema arabicum HOM05D004496 ORTHO05D005950 2.2e-13 80.9 240 32.9
ATR0059G030 Amborella trichopoda HOM05D004496 ORTHO05D005513 2.9e-13 80.5 385 33.0
Potri.006G282000 Populus trichocarpa HOM05D004496 ORTHO05D005513 2.9e-13 80.5 362 35.6
CDE07G1551 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 3.8e-13 80.1 189 36.0
Oeu049699.1 Olea europaea HOM05D004496 ORTHO05D005513 9.2e-12 75.5 62 61.3
BcaNung03755 Brassica carinata HOM05D004496 ORTHO05D005513 1.2e-11 75.1 184 34.8
Nn1g06547 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.6e-11 74.7 102 48.0
Nn3g21624 Nelumbo nucifera HOM05D004496 ORTHO05D005513 3.9e-10 70.1 289 37.0
Eucgr.D01366 Eucalyptus grandis HOM05D004496 ORTHO05D005513 4.3e-09 66.6 119 42.0
BraA03t14400Z Brassica rapa HOM05D004496 ORTHO05D005513 1.2e-08 65.1 144 42.4
Psat4g004280 Pisum sativum HOM05D004496 ORTHO05D005513 1.2e-08 65.1 145 36.6
Ca_21060_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 2.1e-08 64.3 244 32.0
Nn2g15240 Nelumbo nucifera HOM05D004496 ORTHO05D005513 2.1e-08 64.3 283 32.2
TPR.G37047 Trifolium pratense HOM05D004496 ORTHO05D005513 1.1e-07 62.0 76 48.7
Zm00001eb143140 Zea mays HOM05D004496 ORTHO05D005513 6.9e-07 59.3 78 44.9
Zm00001eb112850 Zea mays HOM05D004496 ORTHO05D005513 3.4e-06 57.0 152 37.5
Os01g0922100 Oryza sativa ssp. japonica HOM05D004496 ORTHO05D005513 9.9e-06 55.5 108 36.1


User provided reference genes

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