Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 3.3e-111 405.2 226 100.0
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 1.5e-52 210.3 165 72.7
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 8.7e-48 194.5 211 60.7
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 7.9e-41 171.4 277 45.1
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 1.8e-40 170.2 209 55.0
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 1.1e-39 167.5 183 59.0
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 2.5e-39 166.4 224 53.6
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 5.9e-36 155.2 213 49.8
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 8.5e-35 151.4 186 55.9
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 4.2e-34 149.1 139 63.3
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 1.6e-33 147.1 193 51.8
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 1.6e-33 147.1 228 47.8
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 2.1e-33 146.7 155 57.4
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 2.7e-33 146.4 152 59.2
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 3.6e-33 146.0 152 61.8
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.4e-32 144.1 188 48.9
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 1.8e-32 143.7 191 51.3
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 3.0e-32 142.9 159 57.2
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 3.0e-32 142.9 202 50.0
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 8.8e-32 141.4 207 46.4
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.5e-31 140.6 189 50.8
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 1.5e-31 140.6 206 50.0
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 2.0e-31 140.2 219 44.3
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 2.0e-31 140.2 212 49.5
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 3.3e-31 139.4 188 51.1
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 1.3e-30 137.5 225 45.3
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 1.7e-30 137.1 202 47.5
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 3.7e-30 136.0 224 44.2
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 4.8e-30 135.6 160 55.6
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.8e-29 133.7 172 52.9
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 2.4e-29 133.3 194 47.4
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 4.1e-29 132.5 148 57.4
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 4.1e-29 132.5 143 55.2
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 7.0e-29 131.7 211 43.6
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 7.0e-29 131.7 187 50.3
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 1.2e-28 131.0 191 46.6
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 1.2e-28 131.0 219 47.0
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 2.0e-28 130.2 157 56.7
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 4.5e-28 129.0 207 45.4
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 4.5e-28 129.0 195 46.2
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 5.9e-28 128.6 172 52.3
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 5.9e-28 128.6 171 48.5
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 7.7e-28 128.3 171 52.6
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 1.7e-27 127.1 260 41.9
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.7e-27 127.1 183 48.1
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 1.7e-27 127.1 234 43.6
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 2.2e-27 126.7 112 67.0
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 5.0e-27 125.6 180 51.7
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 8.5e-27 124.8 171 46.2
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 1.9e-26 123.6 191 48.2
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 2.5e-26 123.2 166 48.2
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 3.2e-26 122.9 172 50.0
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 3.2e-26 122.9 105 61.9
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 4.2e-26 122.5 160 50.6
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 4.2e-26 122.5 191 44.5
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 4.2e-26 122.5 130 56.2
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 5.5e-26 122.1 193 45.1
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 7.2e-26 121.7 193 45.6
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 9.4e-26 121.3 166 48.2
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 9.4e-26 121.3 166 48.2
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 1.2e-25 120.9 190 46.3
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 1.2e-25 120.9 166 48.2
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 1.2e-25 120.9 175 49.7
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 1.6e-25 120.6 229 41.9
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 2.1e-25 120.2 166 46.4
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 2.7e-25 119.8 169 47.9
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 2.7e-25 119.8 176 47.7
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 3.6e-25 119.4 167 47.9
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 6.1e-25 118.6 193 45.1
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 1.0e-24 117.9 168 48.2
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 1.4e-24 117.5 166 46.4
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 1.8e-24 117.1 191 43.5
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 1.8e-24 117.1 218 40.8
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 6.7e-24 115.2 205 42.0
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 8.8e-24 114.8 209 43.1
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 1.1e-23 114.4 129 55.0
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.1e-23 114.4 200 42.5
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 1.5e-23 114.0 171 49.7
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 2.6e-23 113.2 98 65.3
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 3.3e-23 112.8 208 41.3
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 4.4e-23 112.5 163 49.1
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 5.7e-23 112.1 191 42.9
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 9.7e-23 111.3 165 50.9
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 1.7e-22 110.5 184 41.3
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 2.2e-22 110.2 149 49.0
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 2.8e-22 109.8 125 52.0
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 6.3e-22 108.6 137 51.8
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 1.4e-21 107.5 176 39.8
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 3.1e-21 106.3 184 46.2
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 5.3e-21 105.5 153 49.7
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 1.2e-20 104.4 158 43.7
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 2.2e-19 100.1 93 66.7
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 2.9e-19 99.8 215 37.7
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.1e-18 97.8 111 51.4
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 9.4e-18 94.7 177 40.1
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 1.6e-17 94.0 184 39.1
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 2.1e-17 93.6 212 39.2
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 4.7e-17 92.4 166 38.6
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 8.0e-17 91.7 136 46.3
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 1.8e-16 90.5 235 39.1
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 2.3e-16 90.1 98 58.2
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 1.2e-15 87.8 219 37.9
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 2.6e-15 86.7 112 59.8
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 2.6e-15 86.7 208 38.0
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 5.7e-15 85.5 126 47.6
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.7e-14 84.0 183 39.9
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 2.8e-14 83.2 149 44.3
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 4.8e-14 82.4 162 40.1
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 4.1e-13 79.3 112 43.8
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 2.9e-11 73.2 60 56.7
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 2.5e-10 70.1 205 32.7
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 4.2e-10 69.3 100 48.0
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 1.6e-09 67.4 91 41.8
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 6.1e-09 65.5 122 46.7
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 1.2e-07 61.2 65 46.2
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 1.5e-07 60.8 34 82.4
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 9.8e-07 58.2 77 42.9
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 2.8e-06 56.6 50 54.0
ClCG00G004860 Citrullus lanatus HOM05D005915 ORTHO05D007239 3.7e-06 56.2 70 44.3
Actinidia25450 Actinidia chinensis HOM05D005915 ORTHO05D007239 6.3e-06 55.5 63 52.4


User provided reference genes

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