Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 3.0e-168 595.1 304 100.0
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 5.2e-112 408.3 244 83.6
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 1.5e-106 390.2 257 76.7
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 9.8e-103 377.5 257 74.3
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 9.2e-101 370.9 245 75.5
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 2.7e-100 369.4 256 72.7
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 2.7e-100 369.4 324 64.2
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 7.8e-100 367.9 256 72.3
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 1.9e-98 363.2 281 67.6
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 2.1e-97 359.8 263 69.2
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 2.8e-97 359.4 245 73.1
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 3.6e-97 359.0 263 69.6
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 1.4e-96 357.1 282 67.0
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 1.5e-95 353.6 240 73.3
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 2.0e-95 353.2 260 70.0
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 3.4e-95 352.4 276 66.7
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 4.4e-95 352.1 282 64.2
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 7.5e-95 351.3 270 67.4
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 9.8e-95 350.9 269 67.3
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 1.3e-94 350.5 275 65.8
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 2.2e-94 349.7 267 67.0
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 4.9e-94 348.6 279 65.9
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 6.4e-94 348.2 274 67.9
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 8.3e-94 347.8 282 64.5
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 1.1e-93 347.4 258 69.4
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 1.1e-93 347.4 282 64.5
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 1.4e-93 347.1 279 64.2
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 1.9e-93 346.7 281 64.1
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 2.4e-93 346.3 254 68.9
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 3.2e-93 345.9 258 69.0
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 3.2e-93 345.9 276 65.6
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 4.1e-93 345.5 266 68.4
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 9.2e-93 344.4 258 69.0
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 9.2e-93 344.4 264 65.9
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 1.6e-92 343.6 260 67.7
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 1.6e-92 343.6 256 68.8
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 6.0e-92 341.7 270 66.7
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 1.7e-91 340.1 264 65.5
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 2.3e-91 339.7 256 67.2
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 2.3e-91 339.7 271 64.9
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 3.9e-91 339.0 271 64.6
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 5.0e-91 338.6 266 66.2
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 5.0e-91 338.6 271 65.3
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 6.6e-91 338.2 260 66.5
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 1.1e-90 337.4 262 64.9
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 1.1e-90 337.4 264 65.5
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 1.5e-90 337.0 261 65.1
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 3.3e-90 335.9 263 63.5
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 5.6e-90 335.1 257 65.8
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 5.6e-90 335.1 258 67.1
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 7.3e-90 334.7 262 65.3
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 7.3e-90 334.7 274 63.1
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 9.5e-90 334.3 270 64.8
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 9.5e-90 334.3 255 66.7
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 3.6e-89 332.4 257 62.6
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 2.3e-88 329.7 260 65.0
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 3.1e-88 329.3 271 63.8
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 4.0e-88 328.9 262 64.5
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 6.8e-88 328.2 261 65.5
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 1.2e-87 327.4 261 65.1
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 1.2e-87 327.4 261 65.1
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 1.5e-87 327.0 271 63.5
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 3.4e-87 325.9 263 63.9
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 1.3e-86 323.9 261 64.0
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 2.2e-86 323.2 263 63.5
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 2.9e-86 322.8 258 65.5
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 2.9e-86 322.8 262 64.1
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 9.2e-85 317.8 261 62.1
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 1.6e-84 317.0 279 60.2
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 7.8e-84 314.7 273 60.1
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 1.7e-83 313.5 243 67.1
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 3.9e-83 312.4 253 62.5
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 6.6e-83 311.6 258 62.8
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 9.5e-82 307.8 271 59.0
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 7.6e-79 298.1 263 60.1
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 2.2e-78 296.6 321 52.3
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 2.2e-78 296.6 233 64.4
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 2.9e-78 296.2 263 59.7
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 6.4e-78 295.0 263 59.7
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 4.1e-77 292.4 263 58.6
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 1.5e-74 283.9 254 58.7
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 1.5e-74 283.9 258 56.6
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 1.9e-74 283.5 257 57.2
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 6.8e-72 275.0 258 55.0
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 8.9e-72 274.6 274 52.2
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 1.2e-71 274.2 203 70.9
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 4.4e-71 272.3 281 55.9
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 4.9e-70 268.9 259 55.6
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 2.4e-69 266.5 260 53.5
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 4.2e-69 265.8 220 63.2
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 3.5e-68 262.7 361 43.8
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 4.6e-68 262.3 200 62.5
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 9.6e-66 254.6 264 51.1
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 1.3e-57 227.6 256 53.1
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 1.2e-55 221.1 285 49.1
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 5.3e-48 195.7 120 81.7
Atru.chr10.2274 Acer truncatum HOM05D006535 ORTHO05D008548 6.7e-43 178.7 124 68.5
TPR.G13151 Trifolium pratense HOM05D006535 ORTHO05D008548 2.5e-37 160.2 120 65.0
Eucgr.E03995 Eucalyptus grandis HOM05D006535 ORTHO05D000824 1.4e-32 144.4 106 67.9
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 4.2e-29 132.9 76 85.5
Cpa.g.c42047 Carica papaya HOM05D006535 ORTHO05D008548 3.6e-28 129.8 90 70.0
Solyc02g036290.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.0e-27 128.3 96 63.5
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 2.2e-25 120.6 132 52.3
CBR_g2795 Chara braunii HOM05D006535 ORTHO05D008548 8.2e-25 118.6 147 40.8
RcHm_v2.0_Chr3g0487171 Rosa chinensis HOM05D006535 ORTHO05D008548 2.4e-24 117.1 133 51.9
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 6.5e-22 109.0 373 26.8
BolC9t56193H Brassica oleracea HOM05D006535 ORTHO05D008548 2.6e-18 97.1 65 67.7
Nitab4.5_0017473g0010 Nicotiana tabacum HOM05D006535 ORTHO05D008548 1.8e-16 90.9 141 38.3
C09p33590 Brassica napus HOM05D006535 ORTHO05D008548 4.1e-16 89.7 59 67.8
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 4.5e-15 86.3 101 46.5
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 7.7e-15 85.5 58 72.4
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 2.5e-13 80.5 66 66.7
A09p26400 Brassica napus HOM05D006535 ORTHO05D033081 1.2e-07 61.6 77 41.6


User provided reference genes

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